Protein–RNA interactions for Protein: Q9P2D1

CHD7, Chromodomain-helicase-DNA-binding protein 7, humanhuman

Predictions only

Length 2,997 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7Q9P2D1 ZNF112-201ENST00000337401 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC6.64□□□□□ -1.35
CHD7Q9P2D1 SPANXN5-201ENST00000375511 1316 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
CHD7Q9P2D1 PTCH1-209ENST00000437951 8049 ntTSL 5 BASIC6.64□□□□□ -1.35
CHD7Q9P2D1 RNU1-134P-201ENST00000362935 165 ntBASIC6.64□□□□□ -1.35
CHD7Q9P2D1 RNA5SP375-201ENST00000362975 119 ntBASIC6.64□□□□□ -1.35
CHD7Q9P2D1 AL590762.1-201ENST00000391782 432 ntBASIC6.64□□□□□ -1.35
CHD7Q9P2D1 BMS1P17-202ENST00000416720 316 ntBASIC6.64□□□□□ -1.35
CHD7Q9P2D1 EEF1B2P6-201ENST00000445713 673 ntBASIC6.64□□□□□ -1.35
CHD7Q9P2D1 AC107391.1-201ENST00000514966 412 ntTSL 2 BASIC6.64□□□□□ -1.35
CHD7Q9P2D1 C15orf41-204ENST00000562877 764 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
CHD7Q9P2D1 AC099511.1-201ENST00000564561 590 ntTSL 2 BASIC6.64□□□□□ -1.35
CHD7Q9P2D1 CCL4-202ENST00000615863 904 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
CHD7Q9P2D1 OR8G3P-202ENST00000641572 1255 ntBASIC6.64□□□□□ -1.35
CHD7Q9P2D1 PRPF8-201ENST00000304992 7295 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
CHD7Q9P2D1 WWC2-205ENST00000504005 5247 ntTSL 2 BASIC6.64□□□□□ -1.35
CHD7Q9P2D1 ACAN-206ENST00000559004 7628 ntAPPRIS ALT2 TSL 5 BASIC6.64□□□□□ -1.35
CHD7Q9P2D1 TRMT10A-202ENST00000394876 1638 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
CHD7Q9P2D1 HLF-210ENST00000575345 3589 ntTSL 2 BASIC6.64□□□□□ -1.35
CHD7Q9P2D1 AC008467.1-201ENST00000512693 5471 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
CHD7Q9P2D1 QTRT2-212ENST00000485050 3844 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
CHD7Q9P2D1 CALCOCO1-201ENST00000262059 5866 ntAPPRIS ALT1 TSL 2 BASIC6.64□□□□□ -1.35
CHD7Q9P2D1 PDE4B-203ENST00000371045 3982 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
CHD7Q9P2D1 ALG13-224ENST00000610588 4175 ntTSL 2 BASIC6.64□□□□□ -1.35
CHD7Q9P2D1 AL590763.1-201ENST00000398297 1545 ntBASIC6.64□□□□□ -1.35
CHD7Q9P2D1 OR13C1P-202ENST00000641378 2919 ntBASIC6.64□□□□□ -1.35
CHD7Q9P2D1 LRRC37A2-203ENST00000576629 5669 ntAPPRIS P1 TSL 5 BASIC6.64□□□□□ -1.35
CHD7Q9P2D1 STK24-208ENST00000539966 9361 ntAPPRIS ALT2 TSL 1 (best) BASIC6.64□□□□□ -1.35
CHD7Q9P2D1 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC6.64□□□□□ -1.35
CHD7Q9P2D1 RPL5P5-201ENST00000392009 893 ntBASIC6.64□□□□□ -1.35
CHD7Q9P2D1 TMEM196-203ENST00000422233 775 ntTSL 5 BASIC6.64□□□□□ -1.35
CHD7Q9P2D1 OR4K3-201ENST00000425829 947 ntAPPRIS P1 BASIC6.64□□□□□ -1.35
CHD7Q9P2D1 CYCSP51-201ENST00000443545 318 ntBASIC6.64□□□□□ -1.35
CHD7Q9P2D1 RPL5P9-201ENST00000448118 886 ntBASIC6.64□□□□□ -1.35
CHD7Q9P2D1 RPS23P6-201ENST00000466136 431 ntBASIC6.64□□□□□ -1.35
CHD7Q9P2D1 LINC01033-204ENST00000523194 715 ntTSL 2 BASIC6.64□□□□□ -1.35
CHD7Q9P2D1 AC021269.1-201ENST00000526860 705 ntBASIC6.64□□□□□ -1.35
CHD7Q9P2D1 LINC01580-201ENST00000555255 561 ntTSL 4 BASIC6.64□□□□□ -1.35
CHD7Q9P2D1 AC005726.5-201ENST00000585189 298 ntTSL 5 BASIC6.64□□□□□ -1.35
CHD7Q9P2D1 SUMO2P15-201ENST00000604285 278 ntBASIC6.64□□□□□ -1.35
CHD7Q9P2D1 AC092681.3-201ENST00000609463 678 ntBASIC6.64□□□□□ -1.35
CHD7Q9P2D1 THADA-202ENST00000402360 2974 ntTSL 5 BASIC6.64□□□□□ -1.35
CHD7Q9P2D1 MTCO1P25-201ENST00000414449 1799 ntBASIC6.64□□□□□ -1.35
CHD7Q9P2D1 GUCY1B2-203ENST00000493639 2871 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
CHD7Q9P2D1 AL590542.1-201ENST00000449314 1596 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
CHD7Q9P2D1 NEPNP-201ENST00000404786 1371 ntBASIC6.64□□□□□ -1.35
CHD7Q9P2D1 DMTF1-204ENST00000413276 3548 ntTSL 5 BASIC6.64□□□□□ -1.35
CHD7Q9P2D1 DNM1L-201ENST00000266481 3101 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
CHD7Q9P2D1 ZNF610-202ENST00000327920 1855 ntAPPRIS P3 TSL 2 BASIC6.64□□□□□ -1.35
CHD7Q9P2D1 MELK-211ENST00000545008 2236 ntTSL 2 BASIC6.64□□□□□ -1.35
CHD7Q9P2D1 UBXN10-201ENST00000375099 5571 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
CHD7Q9P2D1 PPIP5K1-206ENST00000381885 5596 ntAPPRIS ALT2 TSL 5 BASIC6.64□□□□□ -1.35
CHD7Q9P2D1 SOX5-202ENST00000381381 3991 ntTSL 5 BASIC6.64□□□□□ -1.35
CHD7Q9P2D1 MASP1-203ENST00000337774 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC6.63□□□□□ -1.35
CHD7Q9P2D1 AL035660.1-201ENST00000422041 222 ntBASIC6.63□□□□□ -1.35
CHD7Q9P2D1 AC034228.3-201ENST00000446275 562 ntTSL 3 BASIC6.63□□□□□ -1.35
CHD7Q9P2D1 AC115223.1-201ENST00000466377 870 ntBASIC6.63□□□□□ -1.35
CHD7Q9P2D1 LINC02310-201ENST00000556762 572 ntTSL 4 BASIC6.63□□□□□ -1.35
CHD7Q9P2D1 OR4M2-201ENST00000614722 1133 ntAPPRIS P1 BASIC6.63□□□□□ -1.35
CHD7Q9P2D1 LINC01606-203ENST00000519160 2292 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
CHD7Q9P2D1 SOX5-205ENST00000451604 4261 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
CHD7Q9P2D1 CTH-203ENST00000411986 2044 ntTSL 2 BASIC6.63□□□□□ -1.35
CHD7Q9P2D1 OR4Q2-201ENST00000541415 2778 ntAPPRIS P5 BASIC6.63□□□□□ -1.35
CHD7Q9P2D1 BEND3-201ENST00000369042 6200 ntAPPRIS P1 TSL 5 BASIC6.63□□□□□ -1.35
CHD7Q9P2D1 GCNA-201ENST00000373695 3213 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
CHD7Q9P2D1 ZNF845-202ENST00000595091 4413 ntAPPRIS P1 TSL 4 BASIC6.63□□□□□ -1.35
CHD7Q9P2D1 IL24-207ENST00000611909 1621 ntTSL 3 BASIC6.63□□□□□ -1.35
CHD7Q9P2D1 CEP350-202ENST00000367607 13491 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
CHD7Q9P2D1 DZIP1-201ENST00000347108 7068 ntAPPRIS P4 TSL 5 BASIC6.63□□□□□ -1.35
CHD7Q9P2D1 OR6X1-201ENST00000327930 1058 ntAPPRIS P1 BASIC6.63□□□□□ -1.35
CHD7Q9P2D1 SNORA64.1-201ENST00000362600 132 ntBASIC6.63□□□□□ -1.35
CHD7Q9P2D1 AC245452.2-201ENST00000435222 392 ntBASIC6.63□□□□□ -1.35
CHD7Q9P2D1 GEMIN2P1-201ENST00000454246 752 ntBASIC6.63□□□□□ -1.35
CHD7Q9P2D1 RN7SL834P-201ENST00000461450 286 ntBASIC6.63□□□□□ -1.35
CHD7Q9P2D1 RPS23P1-201ENST00000491662 432 ntBASIC6.63□□□□□ -1.35
CHD7Q9P2D1 AC109454.2-201ENST00000503470 520 ntTSL 5 BASIC6.63□□□□□ -1.35
CHD7Q9P2D1 AP001858.2-201ENST00000536213 601 ntBASIC6.63□□□□□ -1.35
CHD7Q9P2D1 CU639417.4-201ENST00000623928 207 ntBASIC6.63□□□□□ -1.35
CHD7Q9P2D1 MAPK10-377ENST00000642006 2752 ntBASIC6.63□□□□□ -1.35
CHD7Q9P2D1 MUT-201ENST00000274813 3749 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
CHD7Q9P2D1 CUBNP3-201ENST00000457461 1784 ntBASIC6.63□□□□□ -1.35
CHD7Q9P2D1 LINC-ROR-201ENST00000553704 2603 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
CHD7Q9P2D1 SYT2-202ENST00000367268 7598 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
CHD7Q9P2D1 MEP1B-204ENST00000581447 2308 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
CHD7Q9P2D1 CXCL8-201ENST00000307407 1705 ntAPPRIS P2 TSL 1 (best) BASIC6.63□□□□□ -1.35
CHD7Q9P2D1 AC093752.1-213ENST00000503038 2376 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
CHD7Q9P2D1 RN7SKP103-201ENST00000363848 320 ntBASIC6.63□□□□□ -1.35
CHD7Q9P2D1 RNA5SP132-201ENST00000364725 118 ntBASIC6.63□□□□□ -1.35
CHD7Q9P2D1 PAGE2B-202ENST00000374974 456 ntTSL 5 BASIC6.63□□□□□ -1.35
CHD7Q9P2D1 BPHL-201ENST00000380368 797 ntTSL 5 BASIC6.63□□□□□ -1.35
CHD7Q9P2D1 AL359636.2-201ENST00000412262 259 ntTSL 3 BASIC6.63□□□□□ -1.35
CHD7Q9P2D1 ANKRD54P1-201ENST00000433115 471 ntBASIC6.63□□□□□ -1.35
CHD7Q9P2D1 TRIM60P16-201ENST00000444048 694 ntBASIC6.63□□□□□ -1.35
CHD7Q9P2D1 AC007386.1-201ENST00000455212 582 ntBASIC6.63□□□□□ -1.35
CHD7Q9P2D1 RN7SL466P-201ENST00000497546 295 ntBASIC6.63□□□□□ -1.35
CHD7Q9P2D1 AC020612.3-201ENST00000550644 570 ntTSL 2 BASIC6.63□□□□□ -1.35
CHD7Q9P2D1 AC007431.2-201ENST00000577189 563 ntTSL 2 BASIC6.63□□□□□ -1.35
CHD7Q9P2D1 AL391425.1-202ENST00000617518 774 ntTSL 5 BASIC6.63□□□□□ -1.35
CHD7Q9P2D1 AC027279.4-201ENST00000624371 2072 ntBASIC6.63□□□□□ -1.35
CHD7Q9P2D1 CNTN4-203ENST00000418658 5093 ntAPPRIS P1 TSL 5 BASIC6.62□□□□□ -1.35
CHD7Q9P2D1 ELP4-218ENST00000639570 5795 ntTSL 5 BASIC6.62□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 78.4 ms