Protein–RNA interactions for Protein: Q9C0C7

AMBRA1, Activating molecule in BECN1-regulated autophagy protein 1, humanhuman

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1Q9C0C7 CYP2C8-201ENST00000371270 1923 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
AMBRA1Q9C0C7 AC083806.2-201ENST00000617795 2685 ntBASIC6.56□□□□□ -1.36
AMBRA1Q9C0C7 UNC13B-210ENST00000636694 8012 ntTSL 5 BASIC6.56□□□□□ -1.36
AMBRA1Q9C0C7 NCOR1-205ENST00000395857 9501 ntTSL 5 BASIC6.56□□□□□ -1.36
AMBRA1Q9C0C7 KCNIP4-202ENST00000382148 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC6.56□□□□□ -1.36
AMBRA1Q9C0C7 KAT6B-203ENST00000372714 5892 ntAPPRIS ALT2 TSL 5 BASIC6.56□□□□□ -1.36
AMBRA1Q9C0C7 STN1-202ENST00000369764 1311 ntAPPRIS P1 TSL 2 BASIC6.56□□□□□ -1.36
AMBRA1Q9C0C7 AC097512.1-201ENST00000511453 1309 ntTSL 3 BASIC6.56□□□□□ -1.36
AMBRA1Q9C0C7 AC245100.4-202ENST00000634638 1342 ntTSL 5 BASIC6.56□□□□□ -1.36
AMBRA1Q9C0C7 FBLN5-205ENST00000556154 1875 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
AMBRA1Q9C0C7 NFATC3-201ENST00000329524 6144 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
AMBRA1Q9C0C7 ZRANB3-202ENST00000401392 6820 ntAPPRIS ALT2 TSL 1 (best) BASIC6.56□□□□□ -1.36
AMBRA1Q9C0C7 FDFT1-208ENST00000525777 1472 ntTSL 2 BASIC6.56□□□□□ -1.36
AMBRA1Q9C0C7 AL391261.1-201ENST00000555712 1479 ntBASIC6.56□□□□□ -1.36
AMBRA1Q9C0C7 DDX60-201ENST00000393743 6071 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
AMBRA1Q9C0C7 SAMD3-203ENST00000437477 2028 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
AMBRA1Q9C0C7 HNRNPCL4-201ENST00000323770 882 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
AMBRA1Q9C0C7 MRRF-203ENST00000373723 1176 ntTSL 3 BASIC6.56□□□□□ -1.36
AMBRA1Q9C0C7 SNORA70.8-201ENST00000384231 136 ntBASIC6.56□□□□□ -1.36
AMBRA1Q9C0C7 RN7SKP30-201ENST00000411373 334 ntBASIC6.56□□□□□ -1.36
AMBRA1Q9C0C7 VAV3-203ENST00000415432 1293 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
AMBRA1Q9C0C7 AC096570.1-201ENST00000419013 569 ntTSL 4 BASIC6.56□□□□□ -1.36
AMBRA1Q9C0C7 LIX1L-AS1-203ENST00000421764 287 ntTSL 2 BASIC6.56□□□□□ -1.36
AMBRA1Q9C0C7 LINC01980-202ENST00000425195 491 ntTSL 3 BASIC6.56□□□□□ -1.36
AMBRA1Q9C0C7 NPM1P48-201ENST00000436002 853 ntBASIC6.56□□□□□ -1.36
AMBRA1Q9C0C7 AL451164.3-201ENST00000441377 447 ntTSL 5 BASIC6.56□□□□□ -1.36
AMBRA1Q9C0C7 AC079781.1-201ENST00000441505 394 ntBASIC6.56□□□□□ -1.36
AMBRA1Q9C0C7 TRBV5-4-201ENST00000454561 544 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
AMBRA1Q9C0C7 RPL31P53-201ENST00000457065 348 ntBASIC6.56□□□□□ -1.36
AMBRA1Q9C0C7 EIF2S2P4-201ENST00000461070 984 ntBASIC6.56□□□□□ -1.36
AMBRA1Q9C0C7 AL138787.2-201ENST00000466576 367 ntTSL 3 BASIC6.56□□□□□ -1.36
AMBRA1Q9C0C7 RN7SL791P-201ENST00000467868 295 ntBASIC6.56□□□□□ -1.36
AMBRA1Q9C0C7 CFHR2-203ENST00000476712 1020 ntAPPRIS ALT2 TSL 3 BASIC6.56□□□□□ -1.36
AMBRA1Q9C0C7 AC093668.1-201ENST00000514917 911 ntAPPRIS P1 TSL 3 BASIC6.56□□□□□ -1.36
AMBRA1Q9C0C7 LINC00500-201ENST00000515860 539 ntTSL 4 BASIC6.56□□□□□ -1.36
AMBRA1Q9C0C7 AC103974.1-201ENST00000527285 874 ntTSL 3 BASIC6.56□□□□□ -1.36
AMBRA1Q9C0C7 SSU72P6-201ENST00000532644 488 ntBASIC6.56□□□□□ -1.36
AMBRA1Q9C0C7 AC009803.1-202ENST00000551940 544 ntTSL 4 BASIC6.56□□□□□ -1.36
AMBRA1Q9C0C7 AC016526.1-201ENST00000555465 520 ntTSL 3 BASIC6.56□□□□□ -1.36
AMBRA1Q9C0C7 AC044860.3-201ENST00000559957 368 ntBASIC6.56□□□□□ -1.36
AMBRA1Q9C0C7 AC130324.2-201ENST00000580873 638 ntTSL 2 BASIC6.56□□□□□ -1.36
AMBRA1Q9C0C7 AC120053.1-201ENST00000607706 736 ntBASIC6.56□□□□□ -1.36
AMBRA1Q9C0C7 AC097504.2-201ENST00000608088 454 ntBASIC6.56□□□□□ -1.36
AMBRA1Q9C0C7 AC063944.3-201ENST00000609969 533 ntBASIC6.56□□□□□ -1.36
AMBRA1Q9C0C7 AP001885.1-201ENST00000621658 558 ntBASIC6.56□□□□□ -1.36
AMBRA1Q9C0C7 AC009812.3-201ENST00000523871 3766 ntTSL 4 BASIC6.56□□□□□ -1.36
AMBRA1Q9C0C7 FBXO3-209ENST00000531080 1448 ntTSL 2 BASIC6.56□□□□□ -1.36
AMBRA1Q9C0C7 HYKK-205ENST00000566332 1422 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
AMBRA1Q9C0C7 KLHL2-202ENST00000421009 2452 ntTSL 5 BASIC6.56□□□□□ -1.36
AMBRA1Q9C0C7 L3MBTL3-209ENST00000533560 3165 ntAPPRIS ALT2 TSL 1 (best) BASIC6.56□□□□□ -1.36
AMBRA1Q9C0C7 ZNF227-202ENST00000391961 2993 ntTSL 4 BASIC6.56□□□□□ -1.36
AMBRA1Q9C0C7 AC001226.2-204ENST00000638101 2645 ntAPPRIS ALT2 TSL 5 BASIC6.56□□□□□ -1.36
AMBRA1Q9C0C7 TMEM135-201ENST00000305494 2433 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
AMBRA1Q9C0C7 GSTCD-202ENST00000394728 2416 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
AMBRA1Q9C0C7 METTL8-217ENST00000612742 8132 ntAPPRIS P1 TSL 2 BASIC6.56□□□□□ -1.36
AMBRA1Q9C0C7 NFATC3-202ENST00000346183 6040 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
AMBRA1Q9C0C7 LARP1B-203ENST00000432347 2707 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
AMBRA1Q9C0C7 ZNF542P-202ENST00000467807 3209 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
AMBRA1Q9C0C7 OR52N1-202ENST00000641645 2545 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
AMBRA1Q9C0C7 RPL37A-210ENST00000491306 3647 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
AMBRA1Q9C0C7 ARHGAP32-202ENST00000392657 6556 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
AMBRA1Q9C0C7 AC121761.1-201ENST00000547326 1482 ntTSL 3 BASIC6.55□□□□□ -1.36
AMBRA1Q9C0C7 MKL2-201ENST00000318282 8608 ntAPPRIS P3 TSL 5 BASIC6.55□□□□□ -1.36
AMBRA1Q9C0C7 PHYHIPL-201ENST00000373878 3569 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
AMBRA1Q9C0C7 APOL4-203ENST00000352371 3227 ntAPPRIS P4 TSL 1 (best) BASIC6.55□□□□□ -1.36
AMBRA1Q9C0C7 TMBIM6-202ENST00000395006 2598 ntAPPRIS P3 TSL 1 (best) BASIC6.55□□□□□ -1.36
AMBRA1Q9C0C7 FGF13-201ENST00000305414 1939 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
AMBRA1Q9C0C7 NRCAM-203ENST00000379024 5782 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
AMBRA1Q9C0C7 TRIM55-203ENST00000350034 1177 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
AMBRA1Q9C0C7 OR10A3-201ENST00000360759 1061 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
AMBRA1Q9C0C7 RNU1-38P-201ENST00000362817 144 ntBASIC6.55□□□□□ -1.36
AMBRA1Q9C0C7 RNU6-670P-201ENST00000364312 104 ntBASIC6.55□□□□□ -1.36
AMBRA1Q9C0C7 FAM204BP-201ENST00000369171 701 ntBASIC6.55□□□□□ -1.36
AMBRA1Q9C0C7 IFNA16-201ENST00000380216 939 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
AMBRA1Q9C0C7 AL358178.1-201ENST00000407698 397 ntBASIC6.55□□□□□ -1.36
AMBRA1Q9C0C7 AL034347.1-201ENST00000420766 835 ntTSL 3 BASIC6.55□□□□□ -1.36
AMBRA1Q9C0C7 AJ239321.1-201ENST00000424255 564 ntBASIC6.55□□□□□ -1.36
AMBRA1Q9C0C7 AC023141.6-201ENST00000429418 337 ntBASIC6.55□□□□□ -1.36
AMBRA1Q9C0C7 AP001628.1-201ENST00000431150 285 ntTSL 5 BASIC6.55□□□□□ -1.36
AMBRA1Q9C0C7 AL357314.1-201ENST00000433521 806 ntTSL 3 BASIC6.55□□□□□ -1.36
AMBRA1Q9C0C7 AL356475.1-201ENST00000440321 341 ntTSL 5 BASIC6.55□□□□□ -1.36
AMBRA1Q9C0C7 AC106869.1-202ENST00000441997 604 ntTSL 4 BASIC6.55□□□□□ -1.36
AMBRA1Q9C0C7 LINC01781-202ENST00000443104 591 ntTSL 2 BASIC6.55□□□□□ -1.36
AMBRA1Q9C0C7 AC003991.1-202ENST00000447058 777 ntTSL 3 BASIC6.55□□□□□ -1.36
AMBRA1Q9C0C7 LDHBP2-201ENST00000456969 1005 ntBASIC6.55□□□□□ -1.36
AMBRA1Q9C0C7 CFLAR-223ENST00000479953 1230 ntTSL 2 BASIC6.55□□□□□ -1.36
AMBRA1Q9C0C7 AC092902.1-201ENST00000486999 259 ntBASIC6.55□□□□□ -1.36
AMBRA1Q9C0C7 AP005202.1-201ENST00000489915 867 ntBASIC6.55□□□□□ -1.36
AMBRA1Q9C0C7 AC063943.2-201ENST00000495697 534 ntBASIC6.55□□□□□ -1.36
AMBRA1Q9C0C7 AC010425.1-201ENST00000511734 554 ntTSL 4 BASIC6.55□□□□□ -1.36
AMBRA1Q9C0C7 AC226119.1-201ENST00000514073 682 ntTSL 3 BASIC6.55□□□□□ -1.36
AMBRA1Q9C0C7 IGKV1D-32-201ENST00000517449 318 ntBASIC6.55□□□□□ -1.36
AMBRA1Q9C0C7 AC105202.1-203ENST00000518024 875 ntTSL 3 BASIC6.55□□□□□ -1.36
AMBRA1Q9C0C7 NAV2-IT1-201ENST00000528204 506 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
AMBRA1Q9C0C7 OR9L1P-201ENST00000529493 933 ntBASIC6.55□□□□□ -1.36
AMBRA1Q9C0C7 OR4A21P-201ENST00000532759 944 ntBASIC6.55□□□□□ -1.36
AMBRA1Q9C0C7 AC087257.2-201ENST00000538759 928 ntBASIC6.55□□□□□ -1.36
AMBRA1Q9C0C7 AL355922.5-201ENST00000553534 351 ntTSL 3 BASIC6.55□□□□□ -1.36
AMBRA1Q9C0C7 AL049870.3-201ENST00000555157 360 ntTSL 2 BASIC6.55□□□□□ -1.36
AMBRA1Q9C0C7 AL049869.4-201ENST00000555669 178 ntBASIC6.55□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 92.1 ms