Protein–RNA interactions for Protein: Q96CF2

CHMP4C, Charged multivesicular body protein 4c, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4CQ96CF2 ZNF402P-201ENST00000404435 3100 ntBASIC8.25□□□□□ -1.09
CHMP4CQ96CF2 CYLD-203ENST00000427738 8503 ntTSL 5 BASIC8.25□□□□□ -1.09
CHMP4CQ96CF2 DGKB-202ENST00000402815 5595 ntAPPRIS ALT1 TSL 5 BASIC8.24□□□□□ -1.09
CHMP4CQ96CF2 SPIRE1-206ENST00000453447 2107 ntTSL 5 BASIC8.24□□□□□ -1.09
CHMP4CQ96CF2 RBPJ-214ENST00000507561 1689 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
CHMP4CQ96CF2 ZHX3-217ENST00000560361 4140 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
CHMP4CQ96CF2 ACOT13-201ENST00000230048 4047 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
CHMP4CQ96CF2 AP000688.2-201ENST00000422473 2336 ntTSL 2 BASIC8.24□□□□□ -1.09
CHMP4CQ96CF2 C2CD5-212ENST00000542676 3438 ntTSL 2 BASIC8.24□□□□□ -1.09
CHMP4CQ96CF2 SMAD5-211ENST00000545279 7012 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
CHMP4CQ96CF2 NRCAM-202ENST00000379022 3900 ntTSL 5 BASIC8.24□□□□□ -1.09
CHMP4CQ96CF2 OR7A17-202ENST00000641113 3639 ntAPPRIS P1 BASIC8.24□□□□□ -1.09
CHMP4CQ96CF2 CYP4Z2P-202ENST00000505841 1436 ntTSL 2 BASIC8.24□□□□□ -1.09
CHMP4CQ96CF2 AC022826.2-201ENST00000358757 776 ntAPPRIS P1 TSL 4 BASIC8.24□□□□□ -1.09
CHMP4CQ96CF2 RN7SKP118-201ENST00000364331 330 ntBASIC8.24□□□□□ -1.09
CHMP4CQ96CF2 LINC02257-201ENST00000412445 605 ntTSL 2 BASIC8.24□□□□□ -1.09
CHMP4CQ96CF2 PSMC1P2-201ENST00000423961 1204 ntBASIC8.24□□□□□ -1.09
CHMP4CQ96CF2 CHCHD3P1-201ENST00000425516 676 ntBASIC8.24□□□□□ -1.09
CHMP4CQ96CF2 AC006333.1-204ENST00000429396 648 ntTSL 3 BASIC8.24□□□□□ -1.09
CHMP4CQ96CF2 AL139350.1-201ENST00000448825 408 ntTSL 3 BASIC8.24□□□□□ -1.09
CHMP4CQ96CF2 KCNIP2-211ENST00000461105 858 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
CHMP4CQ96CF2 AC074386.1-206ENST00000487102 761 ntBASIC8.24□□□□□ -1.09
CHMP4CQ96CF2 AC097451.1-201ENST00000507388 653 ntTSL 3 BASIC8.24□□□□□ -1.09
CHMP4CQ96CF2 AP000426.1-201ENST00000518749 361 ntTSL 3 BASIC8.24□□□□□ -1.09
CHMP4CQ96CF2 RAB30-209ENST00000532548 644 ntTSL 3 BASIC8.24□□□□□ -1.09
CHMP4CQ96CF2 AC022509.1-203ENST00000541940 708 ntTSL 4 BASIC8.24□□□□□ -1.09
CHMP4CQ96CF2 AC027288.1-201ENST00000548359 816 ntTSL 3 BASIC8.24□□□□□ -1.09
CHMP4CQ96CF2 OR5BK1P-201ENST00000550421 823 ntBASIC8.24□□□□□ -1.09
CHMP4CQ96CF2 AC090181.1-201ENST00000560446 264 ntTSL 3 BASIC8.24□□□□□ -1.09
CHMP4CQ96CF2 AC026462.4-201ENST00000565229 951 ntTSL 3 BASIC8.24□□□□□ -1.09
CHMP4CQ96CF2 AC010287.1-201ENST00000566916 357 ntBASIC8.24□□□□□ -1.09
CHMP4CQ96CF2 AC068408.1-201ENST00000577406 1144 ntBASIC8.24□□□□□ -1.09
CHMP4CQ96CF2 EIF4A3P1-201ENST00000578499 647 ntBASIC8.24□□□□□ -1.09
CHMP4CQ96CF2 AC138207.8-206ENST00000580053 637 ntTSL 5 BASIC8.24□□□□□ -1.09
CHMP4CQ96CF2 RPARP-AS1-204ENST00000594818 445 ntTSL 3 BASIC8.24□□□□□ -1.09
CHMP4CQ96CF2 AC211433.1-206ENST00000595409 733 ntTSL 5 BASIC8.24□□□□□ -1.09
CHMP4CQ96CF2 AC007255.2-201ENST00000604053 631 ntBASIC8.24□□□□□ -1.09
CHMP4CQ96CF2 STARD13-AS-232ENST00000609137 882 ntTSL 5 BASIC8.24□□□□□ -1.09
CHMP4CQ96CF2 AL589182.1-201ENST00000611785 320 ntTSL 5 BASIC8.24□□□□□ -1.09
CHMP4CQ96CF2 WASHC4-214ENST00000620430 5807 ntAPPRIS ALT1 TSL 1 (best) BASIC8.24□□□□□ -1.09
CHMP4CQ96CF2 OR2G6-202ENST00000641501 5840 ntAPPRIS P1 BASIC8.24□□□□□ -1.09
CHMP4CQ96CF2 CYP2C8-212ENST00000623108 1962 ntTSL 2 BASIC8.24□□□□□ -1.09
CHMP4CQ96CF2 DMD-202ENST00000343523 5623 ntTSL 5 BASIC8.24□□□□□ -1.09
CHMP4CQ96CF2 BMPR1B-201ENST00000264568 1807 ntAPPRIS P1 TSL 2 BASIC8.24□□□□□ -1.09
CHMP4CQ96CF2 TCL6-203ENST00000459662 3307 ntTSL 2 BASIC8.24□□□□□ -1.09
CHMP4CQ96CF2 CASP10-205ENST00000360132 5814 ntTSL 5 BASIC8.24□□□□□ -1.09
CHMP4CQ96CF2 N4BP2-201ENST00000261435 9744 ntAPPRIS P1 TSL 5 BASIC8.24□□□□□ -1.09
CHMP4CQ96CF2 EYA3-204ENST00000436342 5943 ntTSL 2 BASIC8.24□□□□□ -1.09
CHMP4CQ96CF2 REST-201ENST00000309042 7300 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
CHMP4CQ96CF2 RSC1A1-201ENST00000345034 1854 ntAPPRIS P1 BASIC8.23□□□□□ -1.09
CHMP4CQ96CF2 SCAMP1-206ENST00000618166 1358 ntTSL 2 BASIC8.23□□□□□ -1.09
CHMP4CQ96CF2 ATP13A5-201ENST00000342358 4027 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
CHMP4CQ96CF2 SOAT1-201ENST00000367619 6835 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
CHMP4CQ96CF2 RRS1-AS1-201ENST00000499642 4366 ntTSL 2 BASIC8.23□□□□□ -1.09
CHMP4CQ96CF2 KIAA0391-203ENST00000534898 2611 ntAPPRIS P3 TSL 1 (best) BASIC8.23□□□□□ -1.09
CHMP4CQ96CF2 NFIA-204ENST00000371187 2683 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
CHMP4CQ96CF2 RN7SKP148-201ENST00000410179 275 ntBASIC8.23□□□□□ -1.09
CHMP4CQ96CF2 AC009229.2-201ENST00000417213 351 ntTSL 3 BASIC8.23□□□□□ -1.09
CHMP4CQ96CF2 RPL18AP14-201ENST00000417685 526 ntBASIC8.23□□□□□ -1.09
CHMP4CQ96CF2 AL021707.2-202ENST00000422408 1080 ntTSL 3 BASIC8.23□□□□□ -1.09
CHMP4CQ96CF2 AL451164.3-201ENST00000441377 447 ntTSL 5 BASIC8.23□□□□□ -1.09
CHMP4CQ96CF2 PA2G4P1-201ENST00000442248 1197 ntBASIC8.23□□□□□ -1.09
CHMP4CQ96CF2 AC022080.2-201ENST00000452932 533 ntBASIC8.23□□□□□ -1.09
CHMP4CQ96CF2 AC063955.1-201ENST00000462872 685 ntBASIC8.23□□□□□ -1.09
CHMP4CQ96CF2 RPL34P34-201ENST00000465389 354 ntBASIC8.23□□□□□ -1.09
CHMP4CQ96CF2 LINC02278-201ENST00000512170 500 ntTSL 5 BASIC8.23□□□□□ -1.09
CHMP4CQ96CF2 AC139722.1-201ENST00000512502 782 ntTSL 3 BASIC8.23□□□□□ -1.09
CHMP4CQ96CF2 IGKV2D-38-201ENST00000518423 240 ntBASIC8.23□□□□□ -1.09
CHMP4CQ96CF2 COX6C-209ENST00000523016 745 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
CHMP4CQ96CF2 AP004607.6-201ENST00000525033 1202 ntBASIC8.23□□□□□ -1.09
CHMP4CQ96CF2 SNRPGP1-201ENST00000553864 222 ntBASIC8.23□□□□□ -1.09
CHMP4CQ96CF2 AL591767.3-201ENST00000554632 525 ntBASIC8.23□□□□□ -1.09
CHMP4CQ96CF2 IQCK-206ENST00000564186 882 ntAPPRIS ALT2 TSL 2 BASIC8.23□□□□□ -1.09
CHMP4CQ96CF2 AC010266.1-201ENST00000568962 442 ntTSL 5 BASIC8.23□□□□□ -1.09
CHMP4CQ96CF2 ACTG1P15-201ENST00000570019 1063 ntBASIC8.23□□□□□ -1.09
CHMP4CQ96CF2 AP000919.1-201ENST00000582850 985 ntBASIC8.23□□□□□ -1.09
CHMP4CQ96CF2 ZNF569-205ENST00000589833 762 ntTSL 3 BASIC8.23□□□□□ -1.09
CHMP4CQ96CF2 AC011447.2-201ENST00000592921 283 ntBASIC8.23□□□□□ -1.09
CHMP4CQ96CF2 AC239803.2-201ENST00000610161 430 ntBASIC8.23□□□□□ -1.09
CHMP4CQ96CF2 GBA3-207ENST00000613293 1233 ntTSL 5 BASIC8.23□□□□□ -1.09
CHMP4CQ96CF2 HOXA11-AS1_3.1-201ENST00000613383 98 ntBASIC8.23□□□□□ -1.09
CHMP4CQ96CF2 MIR663AHG-237ENST00000615682 1030 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
CHMP4CQ96CF2 AC132825.8-201ENST00000640783 297 ntBASIC8.23□□□□□ -1.09
CHMP4CQ96CF2 JPX-212ENST00000639185 9658 ntTSL 5 BASIC8.23□□□□□ -1.09
CHMP4CQ96CF2 ZNF14-201ENST00000344099 2949 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
CHMP4CQ96CF2 FDFT1-208ENST00000525777 1472 ntTSL 2 BASIC8.23□□□□□ -1.09
CHMP4CQ96CF2 NAV1-201ENST00000367295 11645 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
CHMP4CQ96CF2 FOXM1-202ENST00000359843 3315 ntAPPRIS P4 TSL 1 (best) BASIC8.23□□□□□ -1.09
CHMP4CQ96CF2 AC129502.1-201ENST00000623261 1654 ntBASIC8.23□□□□□ -1.09
CHMP4CQ96CF2 LRRC37B-201ENST00000327564 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC8.23□□□□□ -1.09
CHMP4CQ96CF2 LGALS8-220ENST00000526634 1852 ntAPPRIS ALT2 TSL 5 BASIC8.23□□□□□ -1.09
CHMP4CQ96CF2 LCOR-201ENST00000286067 4542 ntBASIC8.23□□□□□ -1.09
CHMP4CQ96CF2 OFD1P17-201ENST00000437639 3018 ntBASIC8.23□□□□□ -1.09
CHMP4CQ96CF2 IL31RA-201ENST00000297015 2695 ntAPPRIS ALT2 TSL 5 BASIC8.23□□□□□ -1.09
CHMP4CQ96CF2 PIRT-201ENST00000580256 3810 ntAPPRIS P1 TSL 2 BASIC8.23□□□□□ -1.09
CHMP4CQ96CF2 EPHA3-203ENST00000494014 3085 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
CHMP4CQ96CF2 LRP2BP-203ENST00000510776 3055 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
CHMP4CQ96CF2 NRCAM-201ENST00000351718 6228 ntAPPRIS P3 TSL 1 (best) BASIC8.23□□□□□ -1.09
CHMP4CQ96CF2 KCNAB1-212ENST00000490337 3122 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
CHMP4CQ96CF2 AP002001.1-202ENST00000525797 1754 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
Retrieved 100 of 98,524 protein–RNA pairs in 72.7 ms