Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 AC084782.1-201ENST00000564401 2465 ntBASIC7.99□□□□□ -1.13
SNED1Q8TER0 RNF217-AS1-201ENST00000439075 4507 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
SNED1Q8TER0 LINC01224-203ENST00000596283 2766 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
SNED1Q8TER0 SAR1A-206ENST00000431664 2810 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
SNED1Q8TER0 SLC5A1-204ENST00000543737 4752 ntTSL 2 BASIC7.99□□□□□ -1.13
SNED1Q8TER0 PIK3R3-202ENST00000372006 5019 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
SNED1Q8TER0 ABCD3-202ENST00000370214 3538 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
SNED1Q8TER0 MIR199B-201ENST00000384849 110 ntBASIC7.99□□□□□ -1.13
SNED1Q8TER0 MIR1204-201ENST00000408388 67 ntBASIC7.99□□□□□ -1.13
SNED1Q8TER0 AC118754.1-201ENST00000416958 370 ntTSL 3 BASIC7.99□□□□□ -1.13
SNED1Q8TER0 BMS1P13-201ENST00000417301 885 ntBASIC7.99□□□□□ -1.13
SNED1Q8TER0 GNRHR-202ENST00000420975 859 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
SNED1Q8TER0 AC079355.1-201ENST00000421770 223 ntBASIC7.99□□□□□ -1.13
SNED1Q8TER0 AL158850.1-201ENST00000441249 914 ntTSL 3 BASIC7.99□□□□□ -1.13
SNED1Q8TER0 BMS1P10-201ENST00000443754 1120 ntBASIC7.99□□□□□ -1.13
SNED1Q8TER0 RBMY2AP-201ENST00000445405 1157 ntBASIC7.99□□□□□ -1.13
SNED1Q8TER0 RBMY2CP-201ENST00000448575 1157 ntBASIC7.99□□□□□ -1.13
SNED1Q8TER0 RBMY2DP-202ENST00000448881 1157 ntBASIC7.99□□□□□ -1.13
SNED1Q8TER0 RBMY2BP-202ENST00000451071 1156 ntBASIC7.99□□□□□ -1.13
SNED1Q8TER0 EPDR1-204ENST00000476620 555 ntTSL 4 BASIC7.99□□□□□ -1.13
SNED1Q8TER0 AC004232.1-201ENST00000571388 208 ntBASIC7.99□□□□□ -1.13
SNED1Q8TER0 AC087575.1-201ENST00000585087 229 ntBASIC7.99□□□□□ -1.13
SNED1Q8TER0 AL136084.2-213ENST00000585704 690 ntTSL 5 BASIC7.99□□□□□ -1.13
SNED1Q8TER0 AL136084.2-212ENST00000589976 654 ntTSL 5 BASIC7.99□□□□□ -1.13
SNED1Q8TER0 AC005277.2-201ENST00000617898 390 ntBASIC7.99□□□□□ -1.13
SNED1Q8TER0 AC092683.1-207ENST00000620051 837 ntTSL 2 BASIC7.99□□□□□ -1.13
SNED1Q8TER0 LINC00836-201ENST00000625325 582 ntTSL 4 BASIC7.99□□□□□ -1.13
SNED1Q8TER0 AC183089.2-201ENST00000637931 916 ntBASIC7.99□□□□□ -1.13
SNED1Q8TER0 AC027279.1-201ENST00000568885 4284 ntBASIC7.99□□□□□ -1.13
SNED1Q8TER0 KIAA0040-202ENST00000444639 4494 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
SNED1Q8TER0 CDY10P-201ENST00000452415 1567 ntBASIC7.99□□□□□ -1.13
SNED1Q8TER0 NDC80-201ENST00000261597 2172 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
SNED1Q8TER0 CCDC150-202ENST00000409270 2243 ntAPPRIS ALT2 TSL 5 BASIC7.99□□□□□ -1.13
SNED1Q8TER0 AC015871.3-201ENST00000618835 2261 ntBASIC7.99□□□□□ -1.13
SNED1Q8TER0 GABRA6-207ENST00000523217 2393 ntTSL 5 BASIC7.99□□□□□ -1.13
SNED1Q8TER0 DAOA-AS1-201ENST00000448407 2482 ntTSL 2 BASIC7.99□□□□□ -1.13
SNED1Q8TER0 ZNF451-204ENST00000370708 9478 ntTSL 2 BASIC7.99□□□□□ -1.13
SNED1Q8TER0 AC009237.3-203ENST00000442128 3551 ntBASIC7.99□□□□□ -1.13
SNED1Q8TER0 PPP1R12B-204ENST00000391959 15431 ntTSL 5 BASIC7.99□□□□□ -1.13
SNED1Q8TER0 ZNF107-206ENST00000620827 5685 ntAPPRIS P4 TSL 4 BASIC7.99□□□□□ -1.13
SNED1Q8TER0 TMC5-206ENST00000561503 2487 ntTSL 2 BASIC7.98□□□□□ -1.13
SNED1Q8TER0 AL034417.4-202ENST00000642135 2236 ntBASIC7.98□□□□□ -1.13
SNED1Q8TER0 SLC36A4-206ENST00000529184 1917 ntTSL 2 BASIC7.98□□□□□ -1.13
SNED1Q8TER0 FAM71F1-207ENST00000485070 1574 ntTSL 2 BASIC7.98□□□□□ -1.13
SNED1Q8TER0 NIPBL-201ENST00000282516 10435 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
SNED1Q8TER0 XAGE5-202ENST00000375501 415 ntAPPRIS P1 TSL 5 BASIC7.98□□□□□ -1.13
SNED1Q8TER0 NUTM2A-AS1-203ENST00000413961 501 ntTSL 3 BASIC7.98□□□□□ -1.13
SNED1Q8TER0 AC011753.2-201ENST00000425576 610 ntTSL 5 BASIC7.98□□□□□ -1.13
SNED1Q8TER0 LYPLA1P1-201ENST00000434514 622 ntBASIC7.98□□□□□ -1.13
SNED1Q8TER0 YWHABP1-201ENST00000445359 727 ntBASIC7.98□□□□□ -1.13
SNED1Q8TER0 AC022498.1-201ENST00000449845 696 ntTSL 3 BASIC7.98□□□□□ -1.13
SNED1Q8TER0 AP002453.1-201ENST00000492327 668 ntBASIC7.98□□□□□ -1.13
SNED1Q8TER0 RN7SL104P-201ENST00000498686 293 ntBASIC7.98□□□□□ -1.13
SNED1Q8TER0 AC006499.4-201ENST00000510947 694 ntBASIC7.98□□□□□ -1.13
SNED1Q8TER0 RNA5SP340-201ENST00000517132 107 ntBASIC7.98□□□□□ -1.13
SNED1Q8TER0 AC090572.3-201ENST00000519041 804 ntTSL 3 BASIC7.98□□□□□ -1.13
SNED1Q8TER0 AC090022.1-201ENST00000546569 311 ntBASIC7.98□□□□□ -1.13
SNED1Q8TER0 GTSCR1-201ENST00000582578 470 ntTSL 3 BASIC7.98□□□□□ -1.13
SNED1Q8TER0 ZNF675-208ENST00000601010 669 ntTSL 5 BASIC7.98□□□□□ -1.13
SNED1Q8TER0 ADGRL3-213ENST00000509896 5069 ntTSL 5 BASIC7.98□□□□□ -1.13
SNED1Q8TER0 MGAT5-201ENST00000281923 8144 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
SNED1Q8TER0 ZFP90-201ENST00000398253 4384 ntAPPRIS P1 TSL 4 BASIC7.98□□□□□ -1.13
SNED1Q8TER0 MPPED2-201ENST00000358117 2405 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
SNED1Q8TER0 SELP-203ENST00000367788 2427 ntAPPRIS ALT2 TSL 5 BASIC7.98□□□□□ -1.13
SNED1Q8TER0 GUCY2C-201ENST00000261170 3844 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
SNED1Q8TER0 RIF1-205ENST00000444746 7897 ntAPPRIS P3 TSL 1 (best) BASIC7.98□□□□□ -1.13
SNED1Q8TER0 SLC14A1-208ENST00000586142 2846 ntAPPRIS P3 TSL 1 (best) BASIC7.98□□□□□ -1.13
SNED1Q8TER0 MAPK9-213ENST00000539014 1668 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
SNED1Q8TER0 IL5RA-209ENST00000446632 2514 ntAPPRIS P4 TSL 5 BASIC7.97□□□□□ -1.13
SNED1Q8TER0 SLCO1C1-207ENST00000540354 2529 ntTSL 2 BASIC7.97□□□□□ -1.13
SNED1Q8TER0 NUMB-229ENST00000557597 3547 ntAPPRIS P3 TSL 1 (best) BASIC7.97□□□□□ -1.13
SNED1Q8TER0 MYO10-201ENST00000274203 11456 ntAPPRIS ALT2 TSL 5 BASIC7.97□□□□□ -1.13
SNED1Q8TER0 RAB11A-201ENST00000261890 4930 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
SNED1Q8TER0 PSMA6-201ENST00000261479 1029 ntAPPRIS P2 TSL 1 (best) BASIC7.97□□□□□ -1.13
SNED1Q8TER0 OR4M1-201ENST00000315957 1116 ntAPPRIS P1 BASIC7.97□□□□□ -1.13
SNED1Q8TER0 PSMC1P2-201ENST00000423961 1204 ntBASIC7.97□□□□□ -1.13
SNED1Q8TER0 KRTAP2-5P-201ENST00000446109 396 ntBASIC7.97□□□□□ -1.13
SNED1Q8TER0 AC084211.1-201ENST00000473893 328 ntTSL 2 BASIC7.97□□□□□ -1.13
SNED1Q8TER0 RN7SL177P-201ENST00000476596 299 ntBASIC7.97□□□□□ -1.13
SNED1Q8TER0 RPL12P30-201ENST00000488389 499 ntBASIC7.97□□□□□ -1.13
SNED1Q8TER0 SNX18P24-201ENST00000505249 671 ntBASIC7.97□□□□□ -1.13
SNED1Q8TER0 AP000873.2-204ENST00000530825 375 ntTSL 3 BASIC7.97□□□□□ -1.13
SNED1Q8TER0 AC009509.1-201ENST00000536317 1110 ntTSL 5 BASIC7.97□□□□□ -1.13
SNED1Q8TER0 AC068831.6-201ENST00000560522 795 ntTSL 3 BASIC7.97□□□□□ -1.13
SNED1Q8TER0 MRPS21P8-201ENST00000569196 235 ntBASIC7.97□□□□□ -1.13
SNED1Q8TER0 AC015923.1-202ENST00000581421 491 ntTSL 2 BASIC7.97□□□□□ -1.13
SNED1Q8TER0 AL031665.2-201ENST00000620712 209 ntTSL 3 BASIC7.97□□□□□ -1.13
SNED1Q8TER0 AC120057.5-201ENST00000623840 154 ntBASIC7.97□□□□□ -1.13
SNED1Q8TER0 CTNND1-234ENST00000532844 6012 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
SNED1Q8TER0 TP53BP1-203ENST00000382044 10384 ntAPPRIS ALT2 TSL 1 (best) BASIC7.97□□□□□ -1.13
SNED1Q8TER0 SP110-201ENST00000258381 2426 ntAPPRIS P4 TSL 2 BASIC7.97□□□□□ -1.13
SNED1Q8TER0 GABRA1-211ENST00000635880 1739 ntAPPRIS P1 TSL 5 BASIC7.97□□□□□ -1.13
SNED1Q8TER0 NRXN3-201ENST00000281127 8504 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
SNED1Q8TER0 AC112719.2-201ENST00000501239 1685 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
SNED1Q8TER0 UTY-216ENST00000624098 3636 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
SNED1Q8TER0 ARMC8-210ENST00000469044 4790 ntAPPRIS P1 TSL 5 BASIC7.97□□□□□ -1.13
SNED1Q8TER0 AC018717.1-201ENST00000457712 1505 ntBASIC7.97□□□□□ -1.13
SNED1Q8TER0 NUP155-201ENST00000231498 8143 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
SNED1Q8TER0 MALAT1-202ENST00000534336 8708 ntBASIC7.97□□□□□ -1.13
SNED1Q8TER0 YIPF4-201ENST00000238831 11949 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.13
Retrieved 100 of 98,524 protein–RNA pairs in 101.4 ms