Protein–RNA interactions for Protein: P02649

APOE, Apolipoprotein E, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOEP02649 SLC22A25-201ENST00000306494 1692 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
APOEP02649 DEUP1-209ENST00000531792 1656 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
APOEP02649 VPS13B-202ENST00000357162 14019 ntAPPRIS ALT1 TSL 1 (best) BASIC7.07□□□□□ -1.28
APOEP02649 NALCN-201ENST00000251127 6818 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
APOEP02649 MGST2-201ENST00000265498 801 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
APOEP02649 RNA5SP382-201ENST00000363355 112 ntBASIC7.07□□□□□ -1.28
APOEP02649 RN7SKP118-201ENST00000364331 330 ntBASIC7.07□□□□□ -1.28
APOEP02649 RN7SKP191-201ENST00000364713 306 ntBASIC7.07□□□□□ -1.28
APOEP02649 FPGT-TNNI3K-201ENST00000370893 1195 ntTSL 2 BASIC7.07□□□□□ -1.28
APOEP02649 PLIN2-203ENST00000380465 631 ntTSL 2 BASIC7.07□□□□□ -1.28
APOEP02649 LINC00354-201ENST00000412119 347 ntTSL 5 BASIC7.07□□□□□ -1.28
APOEP02649 AP006748.1-201ENST00000418874 346 ntTSL 3 BASIC7.07□□□□□ -1.28
APOEP02649 PTPN2P1-201ENST00000423212 1072 ntBASIC7.07□□□□□ -1.28
APOEP02649 E2F6P1-201ENST00000428850 745 ntBASIC7.07□□□□□ -1.28
APOEP02649 AL590128.1-201ENST00000433407 286 ntBASIC7.07□□□□□ -1.28
APOEP02649 SCP2-207ENST00000435345 894 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
APOEP02649 BRWD1-IT1-201ENST00000435608 489 ntTSL 3 BASIC7.07□□□□□ -1.28
APOEP02649 LINC01681-201ENST00000439184 760 ntTSL 2 BASIC7.07□□□□□ -1.28
APOEP02649 PMS2P9-201ENST00000441237 515 ntBASIC7.07□□□□□ -1.28
APOEP02649 AL358612.1-201ENST00000452911 481 ntTSL 3 BASIC7.07□□□□□ -1.28
APOEP02649 BZW1P1-201ENST00000454901 1240 ntBASIC7.07□□□□□ -1.28
APOEP02649 BBOF1-202ENST00000463558 550 ntAPPRIS ALT2 TSL 2 BASIC7.07□□□□□ -1.28
APOEP02649 AC068647.2-202ENST00000485020 390 ntTSL 3 BASIC7.07□□□□□ -1.28
APOEP02649 AC138035.1-201ENST00000499986 992 ntTSL 5 BASIC7.07□□□□□ -1.28
APOEP02649 PTTG2-201ENST00000504686 691 ntAPPRIS P1 BASIC7.07□□□□□ -1.28
APOEP02649 AC137549.1-201ENST00000514243 533 ntBASIC7.07□□□□□ -1.28
APOEP02649 IGLVVII-41-1-201ENST00000518405 151 ntBASIC7.07□□□□□ -1.28
APOEP02649 AC087273.2-201ENST00000519038 634 ntTSL 3 BASIC7.07□□□□□ -1.28
APOEP02649 AC131935.1-201ENST00000524621 333 ntBASIC7.07□□□□□ -1.28
APOEP02649 GLYAT-203ENST00000529732 1070 ntAPPRIS P1 TSL 5 BASIC7.07□□□□□ -1.28
APOEP02649 AL161757.5-202ENST00000556696 570 ntTSL 3 BASIC7.07□□□□□ -1.28
APOEP02649 MIR744-201ENST00000578242 98 ntBASIC7.07□□□□□ -1.28
APOEP02649 AL161457.2-206ENST00000592778 802 ntTSL 5 BASIC7.07□□□□□ -1.28
APOEP02649 RPS4XP21-201ENST00000603814 750 ntBASIC7.07□□□□□ -1.28
APOEP02649 AL590032.1-201ENST00000604920 252 ntBASIC7.07□□□□□ -1.28
APOEP02649 LINC02112-203ENST00000606169 419 ntTSL 5 BASIC7.07□□□□□ -1.28
APOEP02649 NBPF25P-202ENST00000619932 3827 ntTSL 2 BASIC7.07□□□□□ -1.28
APOEP02649 AC106782.7-201ENST00000624024 418 ntBASIC7.07□□□□□ -1.28
APOEP02649 AC133555.5-201ENST00000624430 418 ntBASIC7.07□□□□□ -1.28
APOEP02649 AC135068.11-201ENST00000636378 921 ntBASIC7.07□□□□□ -1.28
APOEP02649 AC107884.1-202ENST00000622955 2703 ntTSL 5 BASIC7.07□□□□□ -1.28
APOEP02649 GALNT5-201ENST00000259056 6171 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
APOEP02649 AP005139.1-201ENST00000580702 1647 ntBASIC7.07□□□□□ -1.28
APOEP02649 ERCC6L-202ENST00000373657 4344 ntAPPRIS ALT2 TSL 2 BASIC7.07□□□□□ -1.28
APOEP02649 VDAC2-214ENST00000543351 1424 ntAPPRIS P1 TSL 5 BASIC7.07□□□□□ -1.28
APOEP02649 ZNF806-201ENST00000438300 1774 ntBASIC7.07□□□□□ -1.28
APOEP02649 LINC00922-203ENST00000569736 1760 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
APOEP02649 CCAT2-201ENST00000630920 1752 ntBASIC7.07□□□□□ -1.28
APOEP02649 DNHD1-212ENST00000527990 14298 ntAPPRIS P1 TSL 5 BASIC7.07□□□□□ -1.28
APOEP02649 TATDN2P3-201ENST00000452855 3665 ntBASIC7.07□□□□□ -1.28
APOEP02649 CFI-205ENST00000512148 1914 ntAPPRIS ALT2 TSL 5 BASIC7.07□□□□□ -1.28
APOEP02649 WBP11P1-201ENST00000562560 1931 ntBASIC7.07□□□□□ -1.28
APOEP02649 LRRC49-204ENST00000544974 6605 ntTSL 2 BASIC7.07□□□□□ -1.28
APOEP02649 AC007255.1-201ENST00000450540 1376 ntTSL 3 BASIC7.07□□□□□ -1.28
APOEP02649 CCDC150P1-201ENST00000537123 2215 ntBASIC7.07□□□□□ -1.28
APOEP02649 AC010329.1-201ENST00000593903 8328 ntBASIC7.06□□□□□ -1.28
APOEP02649 ZNF763-202ENST00000358987 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC7.06□□□□□ -1.28
APOEP02649 LAMA2-201ENST00000421865 9640 ntAPPRIS P2 TSL 5 BASIC7.06□□□□□ -1.28
APOEP02649 PKIA-AS1-202ENST00000522302 2011 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
APOEP02649 DMXL1-215ENST00000539542 11236 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
APOEP02649 ECHDC1-210ENST00000454859 2341 ntAPPRIS P3 TSL 1 (best) BASIC7.06□□□□□ -1.28
APOEP02649 LINC02197-201ENST00000502659 2767 ntTSL 2 BASIC7.06□□□□□ -1.28
APOEP02649 FMO4-201ENST00000367749 2252 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
APOEP02649 CACNA1E-204ENST00000367567 14757 ntAPPRIS ALT2 TSL 5 BASIC7.06□□□□□ -1.28
APOEP02649 G6PC-201ENST00000253801 3096 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
APOEP02649 ERG-202ENST00000398897 4651 ntTSL 5 BASIC7.06□□□□□ -1.28
APOEP02649 SYTL2-220ENST00000529581 1910 ntTSL 2 BASIC7.06□□□□□ -1.28
APOEP02649 LACRT-201ENST00000257867 551 ntAPPRIS P2 TSL 1 (best) BASIC7.06□□□□□ -1.28
APOEP02649 SAMD13-203ENST00000370670 565 ntAPPRIS P1 TSL 4 BASIC7.06□□□□□ -1.28
APOEP02649 RNA5SP474-201ENST00000391234 90 ntBASIC7.06□□□□□ -1.28
APOEP02649 AL359922.1-201ENST00000404796 935 ntAPPRIS P1 TSL 5 BASIC7.06□□□□□ -1.28
APOEP02649 RN7SKP205-201ENST00000410999 307 ntBASIC7.06□□□□□ -1.28
APOEP02649 AL663061.1-201ENST00000416625 580 ntBASIC7.06□□□□□ -1.28
APOEP02649 AC010978.1-202ENST00000427050 893 ntTSL 3 BASIC7.06□□□□□ -1.28
APOEP02649 RPS10P21-201ENST00000430654 475 ntBASIC7.06□□□□□ -1.28
APOEP02649 LRTOMT-209ENST00000440313 253 ntTSL 3 BASIC7.06□□□□□ -1.28
APOEP02649 MIR4432HG-201ENST00000441598 470 ntTSL 3 BASIC7.06□□□□□ -1.28
APOEP02649 LAPTM4BP1-201ENST00000447781 690 ntBASIC7.06□□□□□ -1.28
APOEP02649 PGAP2-210ENST00000464441 699 ntTSL 5 BASIC7.06□□□□□ -1.28
APOEP02649 AC129807.1-201ENST00000471614 591 ntTSL 4 BASIC7.06□□□□□ -1.28
APOEP02649 RN7SL655P-201ENST00000486087 298 ntBASIC7.06□□□□□ -1.28
APOEP02649 RPL23AP80-201ENST00000495605 424 ntBASIC7.06□□□□□ -1.28
APOEP02649 AC022126.1-201ENST00000502995 593 ntTSL 4 BASIC7.06□□□□□ -1.28
APOEP02649 MTND6P8-201ENST00000503471 522 ntBASIC7.06□□□□□ -1.28
APOEP02649 AC011352.2-201ENST00000514574 1016 ntBASIC7.06□□□□□ -1.28
APOEP02649 ZNF706-212ENST00000520984 782 ntAPPRIS P1 TSL 5 BASIC7.06□□□□□ -1.28
APOEP02649 SNRPCP6-201ENST00000528310 210 ntBASIC7.06□□□□□ -1.28
APOEP02649 AC025419.1-203ENST00000540652 726 ntTSL 3 BASIC7.06□□□□□ -1.28
APOEP02649 C14orf119-202ENST00000554203 725 ntAPPRIS P1 TSL 2 BASIC7.06□□□□□ -1.28
APOEP02649 RPS11-205ENST00000599561 430 ntTSL 5 BASIC7.06□□□□□ -1.28
APOEP02649 WDR11-AS1-204ENST00000608667 522 ntTSL 5 BASIC7.06□□□□□ -1.28
APOEP02649 AC091768.1-201ENST00000609258 930 ntBASIC7.06□□□□□ -1.28
APOEP02649 AL137000.1-201ENST00000610528 1244 ntBASIC7.06□□□□□ -1.28
APOEP02649 CT45A6-202ENST00000620654 878 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
APOEP02649 AC127071.2-201ENST00000623293 527 ntBASIC7.06□□□□□ -1.28
APOEP02649 TEK-201ENST00000380036 4760 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
APOEP02649 CPED1-206ENST00000450913 2501 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
APOEP02649 ZMAT1-206ENST00000540921 3139 ntAPPRIS P1 TSL 2 BASIC7.06□□□□□ -1.28
APOEP02649 NRXN1-248ENST00000636345 3595 ntTSL 5 BASIC7.06□□□□□ -1.28
APOEP02649 ZNF410-202ENST00000334521 2193 ntTSL 5 BASIC7.06□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 87.7 ms