Protein–RNA interactions for Protein: Q9BWF2

TRAIP, E3 ubiquitin-protein ligase TRAIP, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIPQ9BWF2 AL359313.1-201ENST00000447311 2293 ntTSL 2 BASIC8.51□□□□□ -1.05
TRAIPQ9BWF2 GPX6-201ENST00000361902 1712 ntAPPRIS P2 TSL 1 (best) BASIC8.51□□□□□ -1.05
TRAIPQ9BWF2 GTF2H1-210ENST00000530496 1700 ntTSL 2 BASIC8.51□□□□□ -1.05
TRAIPQ9BWF2 OPALIN-203ENST00000393871 3545 ntTSL 2 BASIC8.51□□□□□ -1.05
TRAIPQ9BWF2 PHF7-211ENST00000615126 1328 ntTSL 5 BASIC8.51□□□□□ -1.05
TRAIPQ9BWF2 PPP1R1C-202ENST00000409137 3004 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
TRAIPQ9BWF2 ERLIN2-211ENST00000523887 2347 ntTSL 2 BASIC8.51□□□□□ -1.05
TRAIPQ9BWF2 EPB41L5-202ENST00000331393 1777 ntAPPRIS P1 TSL 2 BASIC8.5□□□□□ -1.05
TRAIPQ9BWF2 MAGT1-205ENST00000618282 2788 ntAPPRIS ALT1 TSL 1 (best) BASIC8.5□□□□□ -1.05
TRAIPQ9BWF2 IQCA1-206ENST00000431676 3069 ntAPPRIS ALT2 TSL 2 BASIC8.5□□□□□ -1.05
TRAIPQ9BWF2 ERGIC1-201ENST00000326654 3952 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
TRAIPQ9BWF2 HEATR9-207ENST00000604834 1974 ntAPPRIS P3 TSL 1 (best) BASIC8.5□□□□□ -1.05
TRAIPQ9BWF2 ITPR1-201ENST00000302640 10197 ntAPPRIS ALT1 TSL 5 BASIC8.5□□□□□ -1.05
TRAIPQ9BWF2 MAP4-210ENST00000439356 2743 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
TRAIPQ9BWF2 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC8.5□□□□□ -1.05
TRAIPQ9BWF2 SMARCA2-206ENST00000382185 1584 ntTSL 2 BASIC8.5□□□□□ -1.05
TRAIPQ9BWF2 SNORA7B-201ENST00000384360 139 ntBASIC8.5□□□□□ -1.05
TRAIPQ9BWF2 HSPE1-202ENST00000409468 570 ntTSL 2 BASIC8.5□□□□□ -1.05
TRAIPQ9BWF2 YWHAZP3-201ENST00000415292 738 ntBASIC8.5□□□□□ -1.05
TRAIPQ9BWF2 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC8.5□□□□□ -1.05
TRAIPQ9BWF2 AL513175.2-201ENST00000422071 443 ntBASIC8.5□□□□□ -1.05
TRAIPQ9BWF2 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC8.5□□□□□ -1.05
TRAIPQ9BWF2 DPY19L1P2-201ENST00000426647 915 ntBASIC8.5□□□□□ -1.05
TRAIPQ9BWF2 SNX18P9-201ENST00000440580 835 ntBASIC8.5□□□□□ -1.05
TRAIPQ9BWF2 AC002542.1-201ENST00000440683 193 ntBASIC8.5□□□□□ -1.05
TRAIPQ9BWF2 AL158214.1-201ENST00000444423 404 ntBASIC8.5□□□□□ -1.05
TRAIPQ9BWF2 AC016831.3-201ENST00000446451 1723 ntBASIC8.5□□□□□ -1.05
TRAIPQ9BWF2 AC004692.1-201ENST00000455430 424 ntBASIC8.5□□□□□ -1.05
TRAIPQ9BWF2 ZBTB8OS-205ENST00000465588 548 ntTSL 2 BASIC8.5□□□□□ -1.05
TRAIPQ9BWF2 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
TRAIPQ9BWF2 AC117383.1-201ENST00000507698 422 ntTSL 3 BASIC8.5□□□□□ -1.05
TRAIPQ9BWF2 C4orf19-203ENST00000508175 828 ntTSL 3 BASIC8.5□□□□□ -1.05
TRAIPQ9BWF2 AC008565.1-201ENST00000509046 885 ntBASIC8.5□□□□□ -1.05
TRAIPQ9BWF2 AC104108.1-201ENST00000509930 412 ntBASIC8.5□□□□□ -1.05
TRAIPQ9BWF2 AC118465.1-201ENST00000513820 1271 ntBASIC8.5□□□□□ -1.05
TRAIPQ9BWF2 AC106895.1-201ENST00000515825 548 ntTSL 4 BASIC8.5□□□□□ -1.05
TRAIPQ9BWF2 AC100823.2-201ENST00000518337 699 ntBASIC8.5□□□□□ -1.05
TRAIPQ9BWF2 AC008676.1-202ENST00000520658 545 ntTSL 4 BASIC8.5□□□□□ -1.05
TRAIPQ9BWF2 TPT1-AS1-213ENST00000521336 759 ntTSL 5 BASIC8.5□□□□□ -1.05
TRAIPQ9BWF2 FHL1-217ENST00000539015 2310 ntTSL 2 BASIC8.5□□□□□ -1.05
TRAIPQ9BWF2 NR1H4-204ENST00000546380 565 ntTSL 3 BASIC8.5□□□□□ -1.05
TRAIPQ9BWF2 AC130462.1-201ENST00000548144 549 ntTSL 5 BASIC8.5□□□□□ -1.05
TRAIPQ9BWF2 LINC02413-202ENST00000552353 898 ntTSL 5 BASIC8.5□□□□□ -1.05
TRAIPQ9BWF2 RNASE9-208ENST00000556208 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC8.5□□□□□ -1.05
TRAIPQ9BWF2 RNASE9-210ENST00000557209 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC8.5□□□□□ -1.05
TRAIPQ9BWF2 THSD4-AS1-202ENST00000562634 2182 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
TRAIPQ9BWF2 AC027104.1-201ENST00000563702 681 ntBASIC8.5□□□□□ -1.05
TRAIPQ9BWF2 AC099524.1-206ENST00000568131 407 ntTSL 3 BASIC8.5□□□□□ -1.05
TRAIPQ9BWF2 AC046158.2-201ENST00000568764 707 ntTSL 3 BASIC8.5□□□□□ -1.05
TRAIPQ9BWF2 SS18L2P2-201ENST00000583960 235 ntBASIC8.5□□□□□ -1.05
TRAIPQ9BWF2 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC8.5□□□□□ -1.05
TRAIPQ9BWF2 LINC01930-201ENST00000602672 870 ntTSL 5 BASIC8.5□□□□□ -1.05
TRAIPQ9BWF2 AC092954.1-201ENST00000609121 445 ntBASIC8.5□□□□□ -1.05
TRAIPQ9BWF2 IGKV1OR1-1-201ENST00000613775 347 ntBASIC8.5□□□□□ -1.05
TRAIPQ9BWF2 FRG1HP-204ENST00000617940 757 ntBASIC8.5□□□□□ -1.05
TRAIPQ9BWF2 AC087893.2-201ENST00000623272 255 ntBASIC8.5□□□□□ -1.05
TRAIPQ9BWF2 SATB1-AS1-263ENST00000630022 622 ntTSL 5 BASIC8.5□□□□□ -1.05
TRAIPQ9BWF2 HBG1-202ENST00000632727 369 ntTSL 3 BASIC8.5□□□□□ -1.05
TRAIPQ9BWF2 RPGRIP1L-206ENST00000564374 3877 ntTSL 2 BASIC8.5□□□□□ -1.05
TRAIPQ9BWF2 OR2G6-203ENST00000641804 6084 ntAPPRIS P1 BASIC8.5□□□□□ -1.05
TRAIPQ9BWF2 THRB-202ENST00000356447 6345 ntAPPRIS P2 TSL 1 (best) BASIC8.5□□□□□ -1.05
TRAIPQ9BWF2 AADACL3-201ENST00000359318 3662 ntAPPRIS P1 TSL 3 BASIC8.5□□□□□ -1.05
TRAIPQ9BWF2 AC010894.3-201ENST00000442996 2400 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
TRAIPQ9BWF2 UBE2V1-202ENST00000371657 1973 ntTSL 4 BASIC8.5□□□□□ -1.05
TRAIPQ9BWF2 AC137056.2-201ENST00000624055 1958 ntBASIC8.5□□□□□ -1.05
TRAIPQ9BWF2 HKR1-203ENST00000541583 2758 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
TRAIPQ9BWF2 DLC1-202ENST00000316609 1837 ntTSL 2 BASIC8.5□□□□□ -1.05
TRAIPQ9BWF2 CASP1-208ENST00000527979 1521 ntTSL 5 BASIC8.49□□□□□ -1.05
TRAIPQ9BWF2 STXBP5-201ENST00000321680 3456 ntAPPRIS ALT1 TSL 5 BASIC8.49□□□□□ -1.05
TRAIPQ9BWF2 ANKS1B-207ENST00000546960 1383 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
TRAIPQ9BWF2 NAA11-201ENST00000286794 2014 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
TRAIPQ9BWF2 CACNB4-270ENST00000638040 2026 ntTSL 5 BASIC8.49□□□□□ -1.05
TRAIPQ9BWF2 UBR1-202ENST00000546274 3332 ntTSL 2 BASIC8.49□□□□□ -1.05
TRAIPQ9BWF2 SRCAP-201ENST00000262518 11754 ntAPPRIS P1 TSL 2 BASIC8.49□□□□□ -1.05
TRAIPQ9BWF2 KCNJ15-220ENST00000612702 3046 ntAPPRIS P1 TSL 4 BASIC8.49□□□□□ -1.05
TRAIPQ9BWF2 DOCK2-211ENST00000520908 4654 ntTSL 2 BASIC8.49□□□□□ -1.05
TRAIPQ9BWF2 PSG9-204ENST00000418820 1748 ntTSL 5 BASIC8.49□□□□□ -1.05
TRAIPQ9BWF2 E2F8-201ENST00000250024 3240 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
TRAIPQ9BWF2 AL031594.1-201ENST00000417123 1932 ntTSL 2 BASIC8.49□□□□□ -1.05
TRAIPQ9BWF2 GABRR3-202ENST00000472788 1416 ntAPPRIS P1 TSL 5 BASIC8.49□□□□□ -1.05
TRAIPQ9BWF2 LRP12-201ENST00000276654 4112 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
TRAIPQ9BWF2 OR52B5P-204ENST00000641744 3467 ntBASIC8.49□□□□□ -1.05
TRAIPQ9BWF2 MCTS2P-201ENST00000394552 546 ntBASIC8.49□□□□□ -1.05
TRAIPQ9BWF2 AC092952.1-201ENST00000397646 1209 ntBASIC8.49□□□□□ -1.05
TRAIPQ9BWF2 MAML3-201ENST00000398940 831 ntTSL 5 BASIC8.49□□□□□ -1.05
TRAIPQ9BWF2 KRR1P1-201ENST00000419430 803 ntBASIC8.49□□□□□ -1.05
TRAIPQ9BWF2 AL139294.1-201ENST00000435739 512 ntTSL 2 BASIC8.49□□□□□ -1.05
TRAIPQ9BWF2 AC097527.1-201ENST00000437031 530 ntBASIC8.49□□□□□ -1.05
TRAIPQ9BWF2 AC016395.1-201ENST00000444086 465 ntTSL 3 BASIC8.49□□□□□ -1.05
TRAIPQ9BWF2 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
TRAIPQ9BWF2 AC244505.3-201ENST00000454598 187 ntBASIC8.49□□□□□ -1.05
TRAIPQ9BWF2 YAP1P2-201ENST00000455104 610 ntBASIC8.49□□□□□ -1.05
TRAIPQ9BWF2 AC007547.2-201ENST00000468802 360 ntBASIC8.49□□□□□ -1.05
TRAIPQ9BWF2 RN7SL335P-201ENST00000482790 304 ntBASIC8.49□□□□□ -1.05
TRAIPQ9BWF2 ZNF695-204ENST00000487338 826 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
TRAIPQ9BWF2 RN7SL388P-201ENST00000498736 339 ntBASIC8.49□□□□□ -1.05
TRAIPQ9BWF2 AC092546.1-202ENST00000505628 499 ntTSL 2 BASIC8.49□□□□□ -1.05
TRAIPQ9BWF2 AC008705.1-201ENST00000518837 489 ntTSL 3 BASIC8.49□□□□□ -1.05
TRAIPQ9BWF2 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC8.49□□□□□ -1.05
TRAIPQ9BWF2 OSGEPL1-AS1-203ENST00000523895 567 ntTSL 4 BASIC8.49□□□□□ -1.05
Retrieved 100 of 98,524 protein–RNA pairs in 66.4 ms