Protein–RNA interactions for Protein: P59780

AP3S2, AP-3 complex subunit sigma-2, humanhuman

Predictions only

Length 193 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2P59780 AC011815.2-201ENST00000618230 2021 ntBASIC5.68□□□□□ -1.5
AP3S2P59780 MEMO1-203ENST00000404530 1482 ntAPPRIS P1 TSL 2 BASIC5.68□□□□□ -1.5
AP3S2P59780 LINC01415-201ENST00000587320 4071 ntTSL 2 BASIC5.68□□□□□ -1.5
AP3S2P59780 AC005674.2-201ENST00000561486 3510 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
AP3S2P59780 DHRS9-204ENST00000428522 1678 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
AP3S2P59780 SLC16A4-201ENST00000369779 2632 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
AP3S2P59780 SPATA31D5P-202ENST00000527857 4863 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
AP3S2P59780 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
AP3S2P59780 SSX7-201ENST00000298181 1311 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
AP3S2P59780 ZNF208-201ENST00000397126 3992 ntAPPRIS P1 TSL 3 BASIC5.68□□□□□ -1.5
AP3S2P59780 ANP32E-203ENST00000436748 1339 ntTSL 2 BASIC5.68□□□□□ -1.5
AP3S2P59780 AC106872.6-201ENST00000514228 1346 ntBASIC5.68□□□□□ -1.5
AP3S2P59780 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC5.68□□□□□ -1.5
AP3S2P59780 RYR3-209ENST00000634418 15078 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
AP3S2P59780 DTNA-228ENST00000597674 1732 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
AP3S2P59780 ZNF605-204ENST00000392321 6156 ntAPPRIS ALT2 TSL 2 BASIC5.68□□□□□ -1.5
AP3S2P59780 ZNF891-201ENST00000537226 15455 ntAPPRIS P1 TSL 2 BASIC5.68□□□□□ -1.5
AP3S2P59780 ZNF761-202ENST00000432094 4061 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
AP3S2P59780 CUZD1-205ENST00000368904 2903 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
AP3S2P59780 HUWE1-214ENST00000612484 14311 ntTSL 5 BASIC5.67□□□□□ -1.5
AP3S2P59780 ACPP-202ENST00000351273 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
AP3S2P59780 CC2D2B-202ENST00000410012 1792 ntAPPRIS ALT2 TSL 2 BASIC5.67□□□□□ -1.5
AP3S2P59780 AC083837.1-201ENST00000565297 2994 ntBASIC5.67□□□□□ -1.5
AP3S2P59780 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC5.67□□□□□ -1.5
AP3S2P59780 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC5.67□□□□□ -1.5
AP3S2P59780 ATP2C1-203ENST00000422190 3386 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
AP3S2P59780 CLDN10-201ENST00000299339 949 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
AP3S2P59780 IL37-202ENST00000311328 652 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
AP3S2P59780 IL37-205ENST00000353225 652 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
AP3S2P59780 RNA5SP263-201ENST00000363376 128 ntBASIC5.67□□□□□ -1.5
AP3S2P59780 TSACC-202ENST00000368252 491 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
AP3S2P59780 MED15P8-201ENST00000411601 545 ntBASIC5.67□□□□□ -1.5
AP3S2P59780 AC084816.1-201ENST00000413794 565 ntTSL 4 BASIC5.67□□□□□ -1.5
AP3S2P59780 AP001595.1-201ENST00000435878 516 ntTSL 2 BASIC5.67□□□□□ -1.5
AP3S2P59780 AC079922.1-201ENST00000443291 359 ntBASIC5.67□□□□□ -1.5
AP3S2P59780 AC017006.2-201ENST00000444077 464 ntTSL 5 BASIC5.67□□□□□ -1.5
AP3S2P59780 AL512785.1-201ENST00000447899 517 ntTSL 3 BASIC5.67□□□□□ -1.5
AP3S2P59780 PYM1-204ENST00000454792 884 ntTSL 2 BASIC5.67□□□□□ -1.5
AP3S2P59780 SNX18P26-201ENST00000458433 740 ntBASIC5.67□□□□□ -1.5
AP3S2P59780 RPL34P22-201ENST00000468193 318 ntBASIC5.67□□□□□ -1.5
AP3S2P59780 SLC25A51P1-201ENST00000468432 871 ntBASIC5.67□□□□□ -1.5
AP3S2P59780 B4GALT4-209ENST00000471675 712 ntTSL 3 BASIC5.67□□□□□ -1.5
AP3S2P59780 RN7SL152P-201ENST00000484176 298 ntBASIC5.67□□□□□ -1.5
AP3S2P59780 CR383656.1-201ENST00000484916 377 ntBASIC5.67□□□□□ -1.5
AP3S2P59780 AF186996.3-201ENST00000509527 964 ntBASIC5.67□□□□□ -1.5
AP3S2P59780 AC006296.1-201ENST00000514401 591 ntTSL 2 BASIC5.67□□□□□ -1.5
AP3S2P59780 DCSTAMP-203ENST00000517991 949 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
AP3S2P59780 AP001767.2-201ENST00000527291 382 ntBASIC5.67□□□□□ -1.5
AP3S2P59780 AL132719.1-201ENST00000554515 423 ntTSL 3 BASIC5.67□□□□□ -1.5
AP3S2P59780 C14orf2-209ENST00000554880 707 ntAPPRIS P1 TSL 3 BASIC5.67□□□□□ -1.5
AP3S2P59780 LINC02319-201ENST00000555852 349 ntTSL 3 BASIC5.67□□□□□ -1.5
AP3S2P59780 NQO1-205ENST00000561500 891 ntTSL 3 BASIC5.67□□□□□ -1.5
AP3S2P59780 IGHV3OR16-15-201ENST00000565463 414 ntBASIC5.67□□□□□ -1.5
AP3S2P59780 CTSLP2-201ENST00000580501 394 ntBASIC5.67□□□□□ -1.5
AP3S2P59780 Metazoa_SRP.57-201ENST00000597717 283 ntBASIC5.67□□□□□ -1.5
AP3S2P59780 AP001267.4-201ENST00000602598 545 ntBASIC5.67□□□□□ -1.5
AP3S2P59780 AP001554.1-201ENST00000604533 376 ntBASIC5.67□□□□□ -1.5
AP3S2P59780 OR13Z2P-201ENST00000606338 555 ntBASIC5.67□□□□□ -1.5
AP3S2P59780 AL662797.2-201ENST00000607333 527 ntTSL 2 BASIC5.67□□□□□ -1.5
AP3S2P59780 AL132640.3-201ENST00000630473 177 ntBASIC5.67□□□□□ -1.5
AP3S2P59780 AC084879.1-201ENST00000636165 1201 ntBASIC5.67□□□□□ -1.5
AP3S2P59780 HLA-B-257ENST00000640094 147 ntBASIC5.67□□□□□ -1.5
AP3S2P59780 G3BP1-202ENST00000394123 10240 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
AP3S2P59780 AL157831.2-201ENST00000564681 3095 ntBASIC5.67□□□□□ -1.5
AP3S2P59780 AL137058.3-201ENST00000624531 3099 ntBASIC5.67□□□□□ -1.5
AP3S2P59780 DCX-206ENST00000496551 1320 ntAPPRIS P4 TSL 2 BASIC5.67□□□□□ -1.5
AP3S2P59780 STK3-216ENST00000523601 3107 ntTSL 2 BASIC5.67□□□□□ -1.5
AP3S2P59780 AQP4-205ENST00000581374 1586 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
AP3S2P59780 TLR5-205ENST00000540964 4088 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
AP3S2P59780 DBT-202ENST00000370132 10799 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
AP3S2P59780 BACH1-202ENST00000399921 5769 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
AP3S2P59780 ATP5A1P4-201ENST00000556888 1605 ntBASIC5.66□□□□□ -1.5
AP3S2P59780 TPTE2P2-202ENST00000605924 2113 ntTSL 5 BASIC5.66□□□□□ -1.5
AP3S2P59780 ITM2A-202ENST00000434584 1698 ntTSL 2 BASIC5.66□□□□□ -1.5
AP3S2P59780 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC5.66□□□□□ -1.5
AP3S2P59780 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC5.66□□□□□ -1.5
AP3S2P59780 AC110373.1-201ENST00000505994 3505 ntBASIC5.66□□□□□ -1.5
AP3S2P59780 SAMD3-203ENST00000437477 2028 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
AP3S2P59780 LINC02225-201ENST00000510444 4069 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
AP3S2P59780 RNA5SP448-201ENST00000363151 111 ntBASIC5.66□□□□□ -1.5
AP3S2P59780 C9orf153-202ENST00000376001 409 ntAPPRIS ALT2 TSL 3 BASIC5.66□□□□□ -1.5
AP3S2P59780 LINC01424-201ENST00000417820 1031 ntTSL 2 BASIC5.66□□□□□ -1.5
AP3S2P59780 AL390243.1-201ENST00000422038 708 ntTSL 2 BASIC5.66□□□□□ -1.5
AP3S2P59780 AC079584.1-201ENST00000426716 464 ntTSL 3 BASIC5.66□□□□□ -1.5
AP3S2P59780 Z83838.1-201ENST00000431036 925 ntBASIC5.66□□□□□ -1.5
AP3S2P59780 SDHC-204ENST00000432287 460 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
AP3S2P59780 AC114812.2-201ENST00000439336 663 ntTSL 2 BASIC5.66□□□□□ -1.5
AP3S2P59780 MAGEC3-203ENST00000443323 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
AP3S2P59780 REG1CP-206ENST00000447469 496 ntBASIC5.66□□□□□ -1.5
AP3S2P59780 AL591438.2-201ENST00000452635 691 ntBASIC5.66□□□□□ -1.5
AP3S2P59780 MIR4500HG-204ENST00000453832 827 ntTSL 3 BASIC5.66□□□□□ -1.5
AP3S2P59780 WBP1LP1-201ENST00000460451 896 ntBASIC5.66□□□□□ -1.5
AP3S2P59780 AF241726.2-201ENST00000465127 954 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
AP3S2P59780 RN7SL379P-201ENST00000479912 293 ntBASIC5.66□□□□□ -1.5
AP3S2P59780 RPS26P24-201ENST00000497656 331 ntBASIC5.66□□□□□ -1.5
AP3S2P59780 AC090058.1-201ENST00000498788 435 ntBASIC5.66□□□□□ -1.5
AP3S2P59780 NPM1P27-201ENST00000502784 830 ntBASIC5.66□□□□□ -1.5
AP3S2P59780 AC140125.3-202ENST00000504362 348 ntTSL 3 BASIC5.66□□□□□ -1.5
AP3S2P59780 C5orf64-204ENST00000507461 535 ntTSL 4 BASIC5.66□□□□□ -1.5
AP3S2P59780 AC138965.1-201ENST00000509329 348 ntTSL 3 BASIC5.66□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 84.9 ms