Protein–RNA interactions for Protein: P58418

CLRN1, Clarin-1, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1P58418 TRIM60P17-201ENST00000415181 719 ntBASIC6.42□□□□□ -1.38
CLRN1P58418 AC017104.2-201ENST00000417000 321 ntBASIC6.42□□□□□ -1.38
CLRN1P58418 LIX1L-AS1-203ENST00000421764 287 ntTSL 2 BASIC6.42□□□□□ -1.38
CLRN1P58418 AC093107.1-201ENST00000422772 609 ntBASIC6.42□□□□□ -1.38
CLRN1P58418 LMLN-AS1-201ENST00000423460 542 ntTSL 5 BASIC6.42□□□□□ -1.38
CLRN1P58418 AC004870.2-202ENST00000423781 706 ntTSL 3 BASIC6.42□□□□□ -1.38
CLRN1P58418 AC114752.2-201ENST00000424119 404 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
CLRN1P58418 GSTA6P-201ENST00000424144 582 ntBASIC6.42□□□□□ -1.38
CLRN1P58418 AL451047.1-201ENST00000424451 814 ntTSL 3 BASIC6.42□□□□□ -1.38
CLRN1P58418 AL121916.1-201ENST00000429405 308 ntBASIC6.42□□□□□ -1.38
CLRN1P58418 RPS26P4-201ENST00000431743 355 ntBASIC6.42□□□□□ -1.38
CLRN1P58418 IGKV6D-21-201ENST00000436451 409 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
CLRN1P58418 ELOCP11-201ENST00000436690 332 ntBASIC6.42□□□□□ -1.38
CLRN1P58418 ELOCP16-201ENST00000444494 332 ntBASIC6.42□□□□□ -1.38
CLRN1P58418 Z77249.1-201ENST00000444622 1175 ntBASIC6.42□□□□□ -1.38
CLRN1P58418 AC104653.1-202ENST00000446401 390 ntTSL 3 BASIC6.42□□□□□ -1.38
CLRN1P58418 RPL31P20-201ENST00000449593 360 ntBASIC6.42□□□□□ -1.38
CLRN1P58418 LINC00483-203ENST00000450727 686 ntTSL 3 BASIC6.42□□□□□ -1.38
CLRN1P58418 AC004692.1-201ENST00000455430 424 ntBASIC6.42□□□□□ -1.38
CLRN1P58418 CXCR6-203ENST00000457814 1184 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
CLRN1P58418 LCP2-201ENST00000046794 4678 ntAPPRIS P2 TSL 1 (best) BASIC6.42□□□□□ -1.38
CLRN1P58418 RN7SL91P-201ENST00000469313 291 ntBASIC6.42□□□□□ -1.38
CLRN1P58418 AC020898.1-201ENST00000474167 787 ntBASIC6.42□□□□□ -1.38
CLRN1P58418 RN7SL88P-201ENST00000480166 299 ntBASIC6.42□□□□□ -1.38
CLRN1P58418 AC082651.2-201ENST00000496833 166 ntBASIC6.42□□□□□ -1.38
CLRN1P58418 PFN2-217ENST00000498307 556 ntTSL 4 BASIC6.42□□□□□ -1.38
CLRN1P58418 LINC00613-201ENST00000504365 467 ntTSL 3 BASIC6.42□□□□□ -1.38
CLRN1P58418 MTCO1P31-201ENST00000506355 492 ntBASIC6.42□□□□□ -1.38
CLRN1P58418 AP002026.1-204ENST00000506454 749 ntTSL 3 BASIC6.42□□□□□ -1.38
CLRN1P58418 LINC02503-201ENST00000510505 812 ntTSL 2 BASIC6.42□□□□□ -1.38
CLRN1P58418 PGAM4P2-201ENST00000512491 721 ntBASIC6.42□□□□□ -1.38
CLRN1P58418 AC012625.1-201ENST00000515153 625 ntTSL 5 BASIC6.42□□□□□ -1.38
CLRN1P58418 DUXAP5-201ENST00000529668 529 ntBASIC6.42□□□□□ -1.38
CLRN1P58418 KPNB1-203ENST00000540627 2989 ntTSL 2 BASIC6.42□□□□□ -1.38
CLRN1P58418 AC084824.2-201ENST00000548906 345 ntBASIC6.42□□□□□ -1.38
CLRN1P58418 AL355112.1-201ENST00000550309 1236 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
CLRN1P58418 SYNE2-210ENST00000553455 674 ntTSL 2 BASIC6.42□□□□□ -1.38
CLRN1P58418 AC092868.3-201ENST00000560515 784 ntBASIC6.42□□□□□ -1.38
CLRN1P58418 AC011507.1-201ENST00000585364 567 ntTSL 4 BASIC6.42□□□□□ -1.38
CLRN1P58418 RPSAP66-201ENST00000592196 606 ntBASIC6.42□□□□□ -1.38
CLRN1P58418 AC009955.2-201ENST00000597288 542 ntBASIC6.42□□□□□ -1.38
CLRN1P58418 AC005154.6-201ENST00000598361 687 ntAPPRIS P1 TSL 5 BASIC6.42□□□□□ -1.38
CLRN1P58418 AC008385.1-201ENST00000604421 355 ntBASIC6.42□□□□□ -1.38
CLRN1P58418 Z99289.3-201ENST00000605586 594 ntBASIC6.42□□□□□ -1.38
CLRN1P58418 AL512413.1-201ENST00000606489 382 ntBASIC6.42□□□□□ -1.38
CLRN1P58418 OR51C1P-201ENST00000608504 942 ntBASIC6.42□□□□□ -1.38
CLRN1P58418 PRSS3P3-201ENST00000612253 692 ntTSL 5 BASIC6.42□□□□□ -1.38
CLRN1P58418 AC084782.3-201ENST00000612282 578 ntBASIC6.42□□□□□ -1.38
CLRN1P58418 AC126544.2-201ENST00000625174 749 ntBASIC6.42□□□□□ -1.38
CLRN1P58418 AL139220.2-221ENST00000628123 395 ntTSL 5 BASIC6.42□□□□□ -1.38
CLRN1P58418 AC104073.4-201ENST00000632111 598 ntTSL 2 BASIC6.42□□□□□ -1.38
CLRN1P58418 AL009031.1-201ENST00000632346 1026 ntTSL 2 BASIC6.42□□□□□ -1.38
CLRN1P58418 AC073488.7-201ENST00000633785 778 ntBASIC6.42□□□□□ -1.38
CLRN1P58418 AC002115.2-201ENST00000640449 603 ntAPPRIS P1 TSL 5 BASIC6.42□□□□□ -1.38
CLRN1P58418 CASC19-232ENST00000641480 1244 ntBASIC6.42□□□□□ -1.38
CLRN1P58418 FSHB-202ENST00000417547 1890 ntAPPRIS P1 TSL 5 BASIC6.42□□□□□ -1.38
CLRN1P58418 ALKBH8-202ENST00000389568 2491 ntAPPRIS P3 TSL 5 BASIC6.42□□□□□ -1.38
CLRN1P58418 NRXN3-203ENST00000428277 4219 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
CLRN1P58418 SYTL4-203ENST00000372981 4847 ntTSL 2 BASIC6.42□□□□□ -1.38
CLRN1P58418 MED1-201ENST00000300651 5844 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
CLRN1P58418 ACACA-240ENST00000617649 7912 ntTSL 5 BASIC6.42□□□□□ -1.38
CLRN1P58418 GFPT1-202ENST00000361060 8632 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
CLRN1P58418 PDE4D-210ENST00000503258 2860 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
CLRN1P58418 LUC7L2-201ENST00000263545 2287 ntTSL 5 BASIC6.42□□□□□ -1.38
CLRN1P58418 MITF-206ENST00000394351 1956 ntAPPRIS P3 TSL 1 (best) BASIC6.42□□□□□ -1.38
CLRN1P58418 AC061975.5-201ENST00000584928 1441 ntBASIC6.42□□□□□ -1.38
CLRN1P58418 MAPK10-298ENST00000641297 3040 ntAPPRIS P2 BASIC6.42□□□□□ -1.38
CLRN1P58418 SLC16A4-202ENST00000369781 2082 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
CLRN1P58418 CNOT6LP1-201ENST00000559681 1462 ntBASIC6.41□□□□□ -1.38
CLRN1P58418 AC091304.1-202ENST00000568624 3100 ntTSL 5 BASIC6.41□□□□□ -1.38
CLRN1P58418 CYLD-203ENST00000427738 8503 ntTSL 5 BASIC6.41□□□□□ -1.38
CLRN1P58418 CAGE1-208ENST00000512086 2537 ntAPPRIS ALT2 TSL 5 BASIC6.41□□□□□ -1.38
CLRN1P58418 FHL5-203ENST00000541107 1904 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
CLRN1P58418 AL137918.1-201ENST00000624542 1922 ntBASIC6.41□□□□□ -1.38
CLRN1P58418 AC004014.2-201ENST00000623718 5122 ntBASIC6.41□□□□□ -1.38
CLRN1P58418 XPO1-202ENST00000404992 4105 ntAPPRIS P1 TSL 2 BASIC6.41□□□□□ -1.38
CLRN1P58418 TMC3-AS1-206ENST00000612811 2726 ntBASIC6.41□□□□□ -1.38
CLRN1P58418 GLIPR1L1-201ENST00000312442 1132 ntAPPRIS P3 TSL 1 (best) BASIC6.41□□□□□ -1.38
CLRN1P58418 DNAJC12-202ENST00000339758 1064 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
CLRN1P58418 SPINK14-201ENST00000356972 294 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
CLRN1P58418 SNORA30B-201ENST00000365319 129 ntBASIC6.41□□□□□ -1.38
CLRN1P58418 IGBP1-AS2-201ENST00000403371 513 ntTSL 3 BASIC6.41□□□□□ -1.38
CLRN1P58418 NR1I3-208ENST00000412844 989 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
CLRN1P58418 HYALP1-201ENST00000417674 1279 ntBASIC6.41□□□□□ -1.38
CLRN1P58418 AC118470.1-201ENST00000419891 453 ntAPPRIS P1 TSL 3 BASIC6.41□□□□□ -1.38
CLRN1P58418 TCEA1P2-201ENST00000420496 906 ntBASIC6.41□□□□□ -1.38
CLRN1P58418 ARL2BPP3-201ENST00000421226 480 ntBASIC6.41□□□□□ -1.38
CLRN1P58418 HNRNPA1P30-201ENST00000424329 751 ntTSL 3 BASIC6.41□□□□□ -1.38
CLRN1P58418 AC105393.2-201ENST00000431911 549 ntTSL 4 BASIC6.41□□□□□ -1.38
CLRN1P58418 RPS21P1-201ENST00000434479 247 ntBASIC6.41□□□□□ -1.38
CLRN1P58418 SETP8-201ENST00000435341 628 ntBASIC6.41□□□□□ -1.38
CLRN1P58418 AC104698.1-201ENST00000435671 276 ntBASIC6.41□□□□□ -1.38
CLRN1P58418 LINC01918-202ENST00000438148 415 ntTSL 3 BASIC6.41□□□□□ -1.38
CLRN1P58418 NANOGP9-201ENST00000439890 892 ntBASIC6.41□□□□□ -1.38
CLRN1P58418 SNX18P9-201ENST00000440580 835 ntBASIC6.41□□□□□ -1.38
CLRN1P58418 Z99127.2-201ENST00000441426 334 ntBASIC6.41□□□□□ -1.38
CLRN1P58418 AC079781.1-201ENST00000441505 394 ntBASIC6.41□□□□□ -1.38
CLRN1P58418 LINC01307-202ENST00000444327 771 ntTSL 2 BASIC6.41□□□□□ -1.38
CLRN1P58418 AL096829.2-201ENST00000446582 742 ntBASIC6.41□□□□□ -1.38
CLRN1P58418 AC005304.1-201ENST00000457609 405 ntTSL 3 BASIC6.41□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 73.5 ms