Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 ETDA-201ENST00000427686 607 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
CDH13P55290 AC007179.2-206ENST00000434611 467 ntTSL 3 BASIC6.56□□□□□ -1.36
CDH13P55290 AL359644.1-204ENST00000440807 440 ntTSL 3 BASIC6.56□□□□□ -1.36
CDH13P55290 MIR4432HG-201ENST00000441598 470 ntTSL 3 BASIC6.56□□□□□ -1.36
CDH13P55290 AL354714.5-201ENST00000450131 590 ntBASIC6.56□□□□□ -1.36
CDH13P55290 ETDA-202ENST00000454551 388 ntAPPRIS P1 TSL 3 BASIC6.56□□□□□ -1.36
CDH13P55290 LINC01789-202ENST00000455614 491 ntTSL 3 BASIC6.56□□□□□ -1.36
CDH13P55290 SRP68P2-201ENST00000456184 254 ntBASIC6.56□□□□□ -1.36
CDH13P55290 CADM2-AS2-201ENST00000467225 768 ntTSL 5 BASIC6.56□□□□□ -1.36
CDH13P55290 RN7SL216P-201ENST00000471607 298 ntBASIC6.56□□□□□ -1.36
CDH13P55290 FTH1P8-201ENST00000498161 514 ntBASIC6.56□□□□□ -1.36
CDH13P55290 AL135933.1-201ENST00000498657 802 ntBASIC6.56□□□□□ -1.36
CDH13P55290 AC106760.2-201ENST00000504159 619 ntBASIC6.56□□□□□ -1.36
CDH13P55290 SNORA58-201ENST00000505219 137 ntBASIC6.56□□□□□ -1.36
CDH13P55290 AC098487.1-203ENST00000512915 546 ntTSL 5 BASIC6.56□□□□□ -1.36
CDH13P55290 RNA5SP278-201ENST00000517055 102 ntBASIC6.56□□□□□ -1.36
CDH13P55290 XAGE1B-205ENST00000518075 472 ntAPPRIS P1 TSL 2 BASIC6.56□□□□□ -1.36
CDH13P55290 GRPEL2-AS1-201ENST00000521295 401 ntTSL 3 BASIC6.56□□□□□ -1.36
CDH13P55290 AC140063.1-201ENST00000541343 259 ntBASIC6.56□□□□□ -1.36
CDH13P55290 AL355102.4-201ENST00000553638 738 ntTSL 2 BASIC6.56□□□□□ -1.36
CDH13P55290 AC008056.2-201ENST00000553812 551 ntTSL 5 BASIC6.56□□□□□ -1.36
CDH13P55290 LINC02207-201ENST00000554530 1256 ntTSL 5 BASIC6.56□□□□□ -1.36
CDH13P55290 PPIAP6-201ENST00000557078 499 ntBASIC6.56□□□□□ -1.36
CDH13P55290 LINC02330-201ENST00000557784 555 ntTSL 4 BASIC6.56□□□□□ -1.36
CDH13P55290 ADAMTS7P4-205ENST00000560651 453 ntTSL 3 BASIC6.56□□□□□ -1.36
CDH13P55290 ONECUT1-202ENST00000560699 996 ntTSL 3 BASIC6.56□□□□□ -1.36
CDH13P55290 AC018558.5-201ENST00000565840 952 ntBASIC6.56□□□□□ -1.36
CDH13P55290 AL136084.2-214ENST00000587726 716 ntTSL 5 BASIC6.56□□□□□ -1.36
CDH13P55290 ZNF675-204ENST00000599168 592 ntTSL 2 BASIC6.56□□□□□ -1.36
CDH13P55290 AC010519.1-201ENST00000599924 344 ntTSL 5 BASIC6.56□□□□□ -1.36
CDH13P55290 ALKAL2-208ENST00000619265 496 ntTSL 2 BASIC6.56□□□□□ -1.36
CDH13P55290 AC012653.2-201ENST00000621880 420 ntBASIC6.56□□□□□ -1.36
CDH13P55290 LINC02536-201ENST00000625799 625 ntTSL 3 BASIC6.56□□□□□ -1.36
CDH13P55290 AC010168.2-201ENST00000562691 5428 ntBASIC6.56□□□□□ -1.36
CDH13P55290 LINC00702-203ENST00000608792 6300 ntTSL 4 BASIC6.56□□□□□ -1.36
CDH13P55290 CCDC186-203ENST00000369287 7245 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
CDH13P55290 NOSTRIN-209ENST00000458381 2535 ntTSL 2 BASIC6.56□□□□□ -1.36
CDH13P55290 NABP1-204ENST00000410026 11521 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
CDH13P55290 ADAMTS9-AS2-203ENST00000481312 1970 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
CDH13P55290 TMED10-201ENST00000303575 4127 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
CDH13P55290 TMC7-202ENST00000421369 4499 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
CDH13P55290 NR5A2-203ENST00000367362 5086 ntAPPRIS P3 TSL 1 (best) BASIC6.56□□□□□ -1.36
CDH13P55290 KIAA0391-203ENST00000534898 2611 ntAPPRIS P3 TSL 1 (best) BASIC6.56□□□□□ -1.36
CDH13P55290 CDKL5-205ENST00000623535 12533 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
CDH13P55290 TEX11-204ENST00000395889 3133 ntAPPRIS P3 TSL 2 BASIC6.56□□□□□ -1.36
CDH13P55290 ANKS1B-207ENST00000546960 1383 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
CDH13P55290 MAGEB10-202ENST00000614159 1389 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
CDH13P55290 CPED1-201ENST00000310396 5340 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
CDH13P55290 DTNA-207ENST00000444659 6343 ntAPPRIS ALT2 TSL 5 BASIC6.56□□□□□ -1.36
CDH13P55290 ATP6V1A-201ENST00000273398 4591 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
CDH13P55290 TRPC4-210ENST00000625583 3009 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
CDH13P55290 NHS-202ENST00000398097 8213 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
CDH13P55290 PHYHIPL-201ENST00000373878 3569 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
CDH13P55290 MTCO1P25-201ENST00000414449 1799 ntBASIC6.55□□□□□ -1.36
CDH13P55290 LACRT-201ENST00000257867 551 ntAPPRIS P2 TSL 1 (best) BASIC6.55□□□□□ -1.36
CDH13P55290 MGST2-201ENST00000265498 801 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
CDH13P55290 MCTS1-202ENST00000371317 1018 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
CDH13P55290 PDCL3P5-201ENST00000398028 722 ntBASIC6.55□□□□□ -1.36
CDH13P55290 RN7SKP268-201ENST00000411107 316 ntBASIC6.55□□□□□ -1.36
CDH13P55290 AL663061.1-201ENST00000416625 580 ntBASIC6.55□□□□□ -1.36
CDH13P55290 AC244033.1-201ENST00000426826 870 ntBASIC6.55□□□□□ -1.36
CDH13P55290 AC009518.3-201ENST00000438972 253 ntBASIC6.55□□□□□ -1.36
CDH13P55290 AL391361.2-203ENST00000443380 413 ntTSL 2 BASIC6.55□□□□□ -1.36
CDH13P55290 AC092941.2-201ENST00000444379 1008 ntTSL 3 BASIC6.55□□□□□ -1.36
CDH13P55290 AP001469.2-201ENST00000444966 390 ntTSL 5 BASIC6.55□□□□□ -1.36
CDH13P55290 OR7E7P-201ENST00000455678 1012 ntBASIC6.55□□□□□ -1.36
CDH13P55290 RN7SL149P-201ENST00000465197 281 ntBASIC6.55□□□□□ -1.36
CDH13P55290 RPL5P16-201ENST00000471467 790 ntBASIC6.55□□□□□ -1.36
CDH13P55290 RPL5P15-201ENST00000475870 897 ntBASIC6.55□□□□□ -1.36
CDH13P55290 RN7SL776P-201ENST00000493390 268 ntBASIC6.55□□□□□ -1.36
CDH13P55290 SNX18P23-201ENST00000510867 677 ntBASIC6.55□□□□□ -1.36
CDH13P55290 AC092435.1-202ENST00000512752 518 ntTSL 3 BASIC6.55□□□□□ -1.36
CDH13P55290 AC103718.1-201ENST00000522667 683 ntTSL 3 BASIC6.55□□□□□ -1.36
CDH13P55290 AC005828.3-201ENST00000583552 591 ntTSL 5 BASIC6.55□□□□□ -1.36
CDH13P55290 Z99289.1-201ENST00000585373 807 ntTSL 3 BASIC6.55□□□□□ -1.36
CDH13P55290 AL512605.1-201ENST00000588215 1263 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
CDH13P55290 AL365259.1-201ENST00000606334 509 ntTSL 5 BASIC6.55□□□□□ -1.36
CDH13P55290 AC092902.3-201ENST00000610060 373 ntTSL 3 BASIC6.55□□□□□ -1.36
CDH13P55290 TSPAN6-205ENST00000614008 900 ntTSL 5 BASIC6.55□□□□□ -1.36
CDH13P55290 FP325318.1-201ENST00000616097 1263 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
CDH13P55290 AC005393.1-201ENST00000617916 584 ntBASIC6.55□□□□□ -1.36
CDH13P55290 AC069542.2-201ENST00000624816 216 ntBASIC6.55□□□□□ -1.36
CDH13P55290 AC073857.1-201ENST00000625082 1054 ntBASIC6.55□□□□□ -1.36
CDH13P55290 SLC2A14-218ENST00000543909 4125 ntAPPRIS P3 TSL 1 (best) BASIC6.55□□□□□ -1.36
CDH13P55290 AL033543.1-201ENST00000623440 13454 ntBASIC6.55□□□□□ -1.36
CDH13P55290 CD209-203ENST00000315599 4283 ntAPPRIS P3 TSL 1 (best) BASIC6.55□□□□□ -1.36
CDH13P55290 PPP1R11-201ENST00000376758 1723 ntTSL 2 BASIC6.55□□□□□ -1.36
CDH13P55290 ATMIN-204ENST00000564241 4803 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
CDH13P55290 MRPS27-201ENST00000261413 2785 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
CDH13P55290 ZNF138-204ENST00000437743 2574 ntAPPRIS ALT2 TSL 1 (best) BASIC6.55□□□□□ -1.36
CDH13P55290 GOLGB1-202ENST00000393667 11198 ntAPPRIS ALT2 TSL 1 (best) BASIC6.55□□□□□ -1.36
CDH13P55290 AC007402.1-201ENST00000440698 3939 ntTSL 2 BASIC6.55□□□□□ -1.36
CDH13P55290 CFAP221-203ENST00000413369 2801 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
CDH13P55290 PRDM2-202ENST00000311066 7437 ntAPPRIS ALT2 TSL 5 BASIC6.54□□□□□ -1.36
CDH13P55290 ZMYM2-210ENST00000610343 10200 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
CDH13P55290 AP000641.1-201ENST00000531988 1639 ntBASIC6.54□□□□□ -1.36
CDH13P55290 HTR2A-202ENST00000542664 5429 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
CDH13P55290 ZFY-202ENST00000383052 5113 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
CDH13P55290 FAM221B-203ENST00000423537 2931 ntAPPRIS P2 TSL 1 (best) BASIC6.54□□□□□ -1.36
CDH13P55290 MKL2-202ENST00000571589 8799 ntAPPRIS ALT2 TSL 2 BASIC6.54□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 89.2 ms