Protein–RNA interactions for Protein: P51956

NEK3, Serine/threonine-protein kinase Nek3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3P51956 RPSAP7-201ENST00000456871 885 ntBASIC7.23□□□□□ -1.25
NEK3P51956 AC093627.1-201ENST00000465755 877 ntTSL 3 BASIC7.23□□□□□ -1.25
NEK3P51956 OR9N1P-201ENST00000491296 333 ntBASIC7.23□□□□□ -1.25
NEK3P51956 CFI-204ENST00000510800 667 ntTSL 2 BASIC7.23□□□□□ -1.25
NEK3P51956 ACTR6P1-201ENST00000514311 1104 ntBASIC7.23□□□□□ -1.25
NEK3P51956 AC005699.1-203ENST00000515286 688 ntTSL 3 BASIC7.23□□□□□ -1.25
NEK3P51956 AC013546.1-201ENST00000523232 564 ntTSL 4 BASIC7.23□□□□□ -1.25
NEK3P51956 AC010247.1-201ENST00000527895 759 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
NEK3P51956 LINC01559-203ENST00000531049 683 ntTSL 3 BASIC7.23□□□□□ -1.25
NEK3P51956 AL049870.3-201ENST00000555157 360 ntTSL 2 BASIC7.23□□□□□ -1.25
NEK3P51956 AL731537.2-201ENST00000561565 951 ntBASIC7.23□□□□□ -1.25
NEK3P51956 AC133552.4-201ENST00000576103 676 ntBASIC7.23□□□□□ -1.25
NEK3P51956 MIR744-201ENST00000578242 98 ntBASIC7.23□□□□□ -1.25
NEK3P51956 MIR378H-201ENST00000579966 83 ntBASIC7.23□□□□□ -1.25
NEK3P51956 AC093330.1-201ENST00000583326 568 ntTSL 4 BASIC7.23□□□□□ -1.25
NEK3P51956 AL355333.1-201ENST00000605632 279 ntBASIC7.23□□□□□ -1.25
NEK3P51956 AC244196.4-201ENST00000611787 392 ntAPPRIS P1 BASIC7.23□□□□□ -1.25
NEK3P51956 GBA3-207ENST00000613293 1233 ntTSL 5 BASIC7.23□□□□□ -1.25
NEK3P51956 MIR6774-201ENST00000614651 70 ntBASIC7.23□□□□□ -1.25
NEK3P51956 FTO-206ENST00000471389 11766 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
NEK3P51956 NPIPB15-201ENST00000429990 1428 ntAPPRIS P1 TSL 5 BASIC7.23□□□□□ -1.25
NEK3P51956 ZFP37-201ENST00000374227 6266 ntAPPRIS P3 TSL 1 (best) BASIC7.23□□□□□ -1.25
NEK3P51956 OAT-201ENST00000368845 2048 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
NEK3P51956 IL1RAP-212ENST00000443369 2760 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
NEK3P51956 CRB1-209ENST00000535699 5140 ntTSL 5 BASIC7.23□□□□□ -1.25
NEK3P51956 PROX1-AS1-202ENST00000433082 5266 ntTSL 5 BASIC7.23□□□□□ -1.25
NEK3P51956 CD300E-201ENST00000392619 3501 ntAPPRIS P2 TSL 1 (best) BASIC7.23□□□□□ -1.25
NEK3P51956 DPYD-202ENST00000370192 4412 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
NEK3P51956 IFT74-202ENST00000429045 1462 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
NEK3P51956 UTP14C-201ENST00000521776 5529 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
NEK3P51956 ZMYND11-204ENST00000381604 4066 ntTSL 5 BASIC7.22□□□□□ -1.25
NEK3P51956 AC007402.1-201ENST00000440698 3939 ntTSL 2 BASIC7.22□□□□□ -1.25
NEK3P51956 LINC01968-202ENST00000423318 3647 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
NEK3P51956 KCNJ15-220ENST00000612702 3046 ntAPPRIS P1 TSL 4 BASIC7.22□□□□□ -1.25
NEK3P51956 UNC13B-210ENST00000636694 8012 ntTSL 5 BASIC7.22□□□□□ -1.25
NEK3P51956 TTC33-207ENST00000637375 1824 ntTSL 5 BASIC7.22□□□□□ -1.25
NEK3P51956 SLC12A1-202ENST00000380993 4707 ntAPPRIS P3 TSL 5 BASIC7.22□□□□□ -1.25
NEK3P51956 GDNF-202ENST00000344622 3655 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
NEK3P51956 DCP1A-206ENST00000610213 5994 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
NEK3P51956 LRRC37B-220ENST00000584368 2773 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
NEK3P51956 LARS-212ENST00000510191 3737 ntTSL 2 BASIC7.22□□□□□ -1.25
NEK3P51956 EIF4ENIF1-205ENST00000397523 3420 ntTSL 5 BASIC7.22□□□□□ -1.25
NEK3P51956 TGFBR3-207ENST00000525962 3927 ntAPPRIS P3 TSL 1 (best) BASIC7.22□□□□□ -1.25
NEK3P51956 ABCA9-201ENST00000340001 6514 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
NEK3P51956 MIR365B-201ENST00000362317 111 ntBASIC7.22□□□□□ -1.25
NEK3P51956 RPL12P1-201ENST00000374520 498 ntBASIC7.22□□□□□ -1.25
NEK3P51956 RNU6-1055P-201ENST00000391085 107 ntBASIC7.22□□□□□ -1.25
NEK3P51956 TP63-205ENST00000392461 1251 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
NEK3P51956 IGBP1-AS2-201ENST00000403371 513 ntTSL 3 BASIC7.22□□□□□ -1.25
NEK3P51956 MKX-AS1-201ENST00000412244 745 ntTSL 3 BASIC7.22□□□□□ -1.25
NEK3P51956 CBX1P3-201ENST00000413296 527 ntBASIC7.22□□□□□ -1.25
NEK3P51956 CYP3A43-205ENST00000415413 990 ntTSL 5 BASIC7.22□□□□□ -1.25
NEK3P51956 ZBTB8OSP2-201ENST00000423890 504 ntBASIC7.22□□□□□ -1.25
NEK3P51956 AL513303.1-201ENST00000432452 591 ntTSL 2 BASIC7.22□□□□□ -1.25
NEK3P51956 PHB2P1-201ENST00000434943 890 ntBASIC7.22□□□□□ -1.25
NEK3P51956 AC114812.2-201ENST00000439336 663 ntTSL 2 BASIC7.22□□□□□ -1.25
NEK3P51956 AC003035.2-201ENST00000448948 696 ntTSL 3 BASIC7.22□□□□□ -1.25
NEK3P51956 AC108463.2-201ENST00000451230 412 ntTSL 5 BASIC7.22□□□□□ -1.25
NEK3P51956 LINC01839-201ENST00000451348 727 ntTSL 3 BASIC7.22□□□□□ -1.25
NEK3P51956 PSPC1P2-201ENST00000455130 225 ntBASIC7.22□□□□□ -1.25
NEK3P51956 AC013727.1-202ENST00000455716 580 ntTSL 4 BASIC7.22□□□□□ -1.25
NEK3P51956 AL133480.2-201ENST00000456723 487 ntBASIC7.22□□□□□ -1.25
NEK3P51956 AC091982.1-202ENST00000473923 343 ntBASIC7.22□□□□□ -1.25
NEK3P51956 NDUFB2-215ENST00000482954 544 ntTSL 3 BASIC7.22□□□□□ -1.25
NEK3P51956 RPL10P7-201ENST00000495649 625 ntBASIC7.22□□□□□ -1.25
NEK3P51956 LINC01085-203ENST00000511195 326 ntBASIC7.22□□□□□ -1.25
NEK3P51956 RNA5SP96-201ENST00000516041 107 ntBASIC7.22□□□□□ -1.25
NEK3P51956 IGHVII-51-2-201ENST00000519778 259 ntBASIC7.22□□□□□ -1.25
NEK3P51956 PIH1D2-208ENST00000532211 1103 ntAPPRIS P1 TSL 5 BASIC7.22□□□□□ -1.25
NEK3P51956 AC022075.2-201ENST00000535911 562 ntTSL 4 BASIC7.22□□□□□ -1.25
NEK3P51956 MIR4800-201ENST00000537353 80 ntBASIC7.22□□□□□ -1.25
NEK3P51956 AC079328.3-201ENST00000558905 691 ntTSL 3 BASIC7.22□□□□□ -1.25
NEK3P51956 AC021351.1-202ENST00000561394 701 ntTSL 3 BASIC7.22□□□□□ -1.25
NEK3P51956 AC010528.1-201ENST00000568714 739 ntTSL 4 BASIC7.22□□□□□ -1.25
NEK3P51956 MIR3135A-201ENST00000578460 77 ntBASIC7.22□□□□□ -1.25
NEK3P51956 AC010519.1-201ENST00000599924 344 ntTSL 5 BASIC7.22□□□□□ -1.25
NEK3P51956 AC023513.1-201ENST00000604396 691 ntBASIC7.22□□□□□ -1.25
NEK3P51956 AC015802.5-201ENST00000607478 399 ntBASIC7.22□□□□□ -1.25
NEK3P51956 AC091059.2-201ENST00000623355 614 ntBASIC7.22□□□□□ -1.25
NEK3P51956 AC026108.1-201ENST00000635444 547 ntBASIC7.22□□□□□ -1.25
NEK3P51956 AC119674.1-220ENST00000641502 1048 ntBASIC7.22□□□□□ -1.25
NEK3P51956 ARL14EPL-201ENST00000601302 1914 ntAPPRIS P1 TSL 5 BASIC7.22□□□□□ -1.25
NEK3P51956 AC004988.1-201ENST00000415237 1771 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
NEK3P51956 DEFB132-201ENST00000382376 2121 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
NEK3P51956 DCSTAMP-208ENST00000622554 1471 ntTSL 5 BASIC7.22□□□□□ -1.25
NEK3P51956 PPP1R2P3-201ENST00000522232 1991 ntAPPRIS P1 BASIC7.22□□□□□ -1.25
NEK3P51956 ALMS1-207ENST00000614410 11700 ntAPPRIS ALT2 TSL 5 BASIC7.22□□□□□ -1.25
NEK3P51956 PLA2R1-201ENST00000283243 14371 ntAPPRIS P3 TSL 1 (best) BASIC7.22□□□□□ -1.25
NEK3P51956 IARS-206ENST00000447699 4186 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
NEK3P51956 AC062029.1-202ENST00000606164 3651 ntBASIC7.22□□□□□ -1.25
NEK3P51956 CORIN-201ENST00000273857 4852 ntAPPRIS P2 TSL 1 (best) BASIC7.22□□□□□ -1.25
NEK3P51956 LINC01991-202ENST00000446091 1524 ntTSL 2 BASIC7.22□□□□□ -1.25
NEK3P51956 INPP4B-212ENST00000507861 1506 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
NEK3P51956 AC119674.1-202ENST00000641333 1860 ntBASIC7.21□□□□□ -1.25
NEK3P51956 TMED10-201ENST00000303575 4127 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.25
NEK3P51956 AL390726.6-202ENST00000635962 1365 ntTSL 5 BASIC7.21□□□□□ -1.25
NEK3P51956 ZNF571-205ENST00000590751 1700 ntTSL 2 BASIC7.21□□□□□ -1.25
NEK3P51956 TLK2-214ENST00000582809 3608 ntTSL 1 (best) BASIC7.21□□□□□ -1.25
NEK3P51956 OR56B1-201ENST00000317121 2075 ntAPPRIS P1 BASIC7.21□□□□□ -1.25
NEK3P51956 SP110-201ENST00000258381 2426 ntAPPRIS P4 TSL 2 BASIC7.21□□□□□ -1.25
Retrieved 100 of 98,524 protein–RNA pairs in 80.2 ms