Protein–RNA interactions for Protein: P48431

SOX2, Transcription factor SOX-2, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2P48431 AP000641.1-201ENST00000531988 1639 ntBASIC6.07□□□□□ -1.44
SOX2P48431 MFSD8-256ENST00000641949 1640 ntBASIC6.07□□□□□ -1.44
SOX2P48431 PDE8B-208ENST00000505283 3474 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
SOX2P48431 RBPJ-202ENST00000342320 5761 ntAPPRIS P3 TSL 1 (best) BASIC6.06□□□□□ -1.44
SOX2P48431 GPATCH2L-201ENST00000261530 14007 ntTSL 2 BASIC6.06□□□□□ -1.44
SOX2P48431 DCX-207ENST00000635795 9163 ntAPPRIS P4 TSL 1 (best) BASIC6.06□□□□□ -1.44
SOX2P48431 IRF6-201ENST00000367021 4306 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
SOX2P48431 FYB1-209ENST00000512982 2747 ntAPPRIS ALT2 TSL 2 BASIC6.06□□□□□ -1.44
SOX2P48431 OR7D4-203ENST00000641669 4965 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
SOX2P48431 DOCK9-208ENST00000448493 7887 ntAPPRIS ALT2 TSL 5 BASIC6.06□□□□□ -1.44
SOX2P48431 LINC01537-201ENST00000450804 2450 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
SOX2P48431 NPIPB13-201ENST00000520915 3584 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
SOX2P48431 LINC01751-201ENST00000569178 1770 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
SOX2P48431 MTND4P9-201ENST00000507819 1346 ntBASIC6.06□□□□□ -1.44
SOX2P48431 U3.1-201ENST00000362500 215 ntBASIC6.06□□□□□ -1.44
SOX2P48431 TAAR2-202ENST00000367931 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
SOX2P48431 AL035467.1-201ENST00000403583 686 ntBASIC6.06□□□□□ -1.44
SOX2P48431 KCNJ13-202ENST00000409779 1099 ntTSL 2 BASIC6.06□□□□□ -1.44
SOX2P48431 PPIAP30-201ENST00000415473 519 ntBASIC6.06□□□□□ -1.44
SOX2P48431 TEX38-202ENST00000415500 566 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
SOX2P48431 AC013268.2-201ENST00000420753 337 ntBASIC6.06□□□□□ -1.44
SOX2P48431 AL158070.1-201ENST00000421614 631 ntTSL 2 BASIC6.06□□□□□ -1.44
SOX2P48431 AL606970.4-201ENST00000424343 455 ntTSL 2 BASIC6.06□□□□□ -1.44
SOX2P48431 AC010978.1-202ENST00000427050 893 ntTSL 3 BASIC6.06□□□□□ -1.44
SOX2P48431 MIR181A2HG-201ENST00000429139 662 ntTSL 2 BASIC6.06□□□□□ -1.44
SOX2P48431 LSM3P3-201ENST00000436601 306 ntBASIC6.06□□□□□ -1.44
SOX2P48431 AL136528.1-201ENST00000443034 754 ntTSL 3 BASIC6.06□□□□□ -1.44
SOX2P48431 TCEAL4P1-201ENST00000453620 588 ntBASIC6.06□□□□□ -1.44
SOX2P48431 LINC00652-202ENST00000454749 963 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
SOX2P48431 AF015262.1-201ENST00000455028 698 ntTSL 3 BASIC6.06□□□□□ -1.44
SOX2P48431 MTND2P30-201ENST00000456663 382 ntBASIC6.06□□□□□ -1.44
SOX2P48431 AC115223.1-201ENST00000466377 870 ntBASIC6.06□□□□□ -1.44
SOX2P48431 AC078828.1-201ENST00000471993 458 ntTSL 3 BASIC6.06□□□□□ -1.44
SOX2P48431 RN7SL563P-201ENST00000481233 298 ntBASIC6.06□□□□□ -1.44
SOX2P48431 AC012158.1-202ENST00000482431 1132 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
SOX2P48431 AC112184.1-201ENST00000505179 312 ntBASIC6.06□□□□□ -1.44
SOX2P48431 AC117525.1-201ENST00000515228 503 ntBASIC6.06□□□□□ -1.44
SOX2P48431 LINC00500-201ENST00000515860 539 ntTSL 4 BASIC6.06□□□□□ -1.44
SOX2P48431 AC091096.2-201ENST00000523284 587 ntTSL 3 BASIC6.06□□□□□ -1.44
SOX2P48431 AL135934.1-201ENST00000527684 537 ntTSL 2 BASIC6.06□□□□□ -1.44
SOX2P48431 OR4A42P-201ENST00000531397 938 ntBASIC6.06□□□□□ -1.44
SOX2P48431 ANP32E-205ENST00000533654 908 ntTSL 2 BASIC6.06□□□□□ -1.44
SOX2P48431 AC092375.1-201ENST00000550410 637 ntBASIC6.06□□□□□ -1.44
SOX2P48431 AL117192.1-204ENST00000553485 449 ntTSL 2 BASIC6.06□□□□□ -1.44
SOX2P48431 OR4F28P-201ENST00000559128 938 ntBASIC6.06□□□□□ -1.44
SOX2P48431 RN7SL42P-201ENST00000579786 294 ntBASIC6.06□□□□□ -1.44
SOX2P48431 C10orf82-203ENST00000588184 852 ntAPPRIS ALT2 TSL 3 BASIC6.06□□□□□ -1.44
SOX2P48431 OR4F8P-201ENST00000589943 937 ntBASIC6.06□□□□□ -1.44
SOX2P48431 PRR13P5-201ENST00000596581 442 ntBASIC6.06□□□□□ -1.44
SOX2P48431 PINLYP-206ENST00000599207 712 ntAPPRIS ALT2 TSL 5 BASIC6.06□□□□□ -1.44
SOX2P48431 AC007785.3-202ENST00000601033 518 ntTSL 3 BASIC6.06□□□□□ -1.44
SOX2P48431 AL050403.2-202ENST00000603462 492 ntTSL 5 BASIC6.06□□□□□ -1.44
SOX2P48431 AP000436.1-201ENST00000605239 800 ntBASIC6.06□□□□□ -1.44
SOX2P48431 NPLOC4-221ENST00000625705 405 ntTSL 5 BASIC6.06□□□□□ -1.44
SOX2P48431 LAMTOR5-AS1-248ENST00000630488 703 ntTSL 5 BASIC6.06□□□□□ -1.44
SOX2P48431 AL354702.2-202ENST00000641481 890 ntBASIC6.06□□□□□ -1.44
SOX2P48431 IFT74-202ENST00000429045 1462 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
SOX2P48431 AC025263.1-201ENST00000501387 2538 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
SOX2P48431 DCC-203ENST00000442544 10206 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
SOX2P48431 KCNA2-209ENST00000639048 10836 ntTSL 5 BASIC6.06□□□□□ -1.44
SOX2P48431 CA10-204ENST00000570565 2276 ntTSL 5 BASIC6.06□□□□□ -1.44
SOX2P48431 AC093278.2-201ENST00000564956 2485 ntBASIC6.06□□□□□ -1.44
SOX2P48431 MAT2B-201ENST00000280969 2226 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
SOX2P48431 PYROXD1-205ENST00000538582 3639 ntTSL 2 BASIC6.06□□□□□ -1.44
SOX2P48431 XIAP-205ENST00000434753 8415 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
SOX2P48431 AC009779.8-201ENST00000641684 4384 ntBASIC6.06□□□□□ -1.44
SOX2P48431 SV2B-202ENST00000394232 11279 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
SOX2P48431 ESRRG-208ENST00000391890 5542 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
SOX2P48431 LINC01011-204ENST00000605901 1573 ntTSL 2 BASIC6.06□□□□□ -1.44
SOX2P48431 MDM2-201ENST00000258148 1361 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
SOX2P48431 EEF1A1P20-201ENST00000514852 1386 ntBASIC6.06□□□□□ -1.44
SOX2P48431 ABCA11P-202ENST00000504019 2110 ntBASIC6.05□□□□□ -1.44
SOX2P48431 ZNF540-202ENST00000343599 3073 ntAPPRIS P3 TSL 5 BASIC6.05□□□□□ -1.44
SOX2P48431 NSD1-201ENST00000347982 7688 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
SOX2P48431 AL449283.1-201ENST00000602631 3403 ntBASIC6.05□□□□□ -1.44
SOX2P48431 RFTN2-201ENST00000295049 5827 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
SOX2P48431 INPP5F-208ENST00000637174 3168 ntTSL 5 BASIC6.05□□□□□ -1.44
SOX2P48431 CMAHP-202ENST00000377993 1681 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
SOX2P48431 SLC1A2-202ENST00000395750 11538 ntAPPRIS ALT1 TSL 1 (best) BASIC6.05□□□□□ -1.44
SOX2P48431 AL158064.2-205ENST00000640346 4082 ntTSL 5 BASIC6.05□□□□□ -1.44
SOX2P48431 PNPLA4-204ENST00000537427 2559 ntTSL 2 BASIC6.05□□□□□ -1.44
SOX2P48431 PSMA3-201ENST00000216455 970 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
SOX2P48431 GLYAT-201ENST00000278400 1150 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
SOX2P48431 RNU6-618P-201ENST00000363518 112 ntBASIC6.05□□□□□ -1.44
SOX2P48431 S100A7-201ENST00000368722 442 ntAPPRIS P1 TSL 3 BASIC6.05□□□□□ -1.44
SOX2P48431 PFKFB1-201ENST00000374992 1156 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
SOX2P48431 XAGE5-202ENST00000375501 415 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
SOX2P48431 HOPX-204ENST00000381260 1141 ntTSL 3 BASIC6.05□□□□□ -1.44
SOX2P48431 RNU6-925P-201ENST00000384629 104 ntBASIC6.05□□□□□ -1.44
SOX2P48431 MIR614-201ENST00000385082 90 ntBASIC6.05□□□□□ -1.44
SOX2P48431 MIR620-201ENST00000385232 95 ntBASIC6.05□□□□□ -1.44
SOX2P48431 RPL36A-202ENST00000392994 691 ntTSL 2 BASIC6.05□□□□□ -1.44
SOX2P48431 KLRC3-202ENST00000396439 1028 ntAPPRIS ALT2 TSL 5 BASIC6.05□□□□□ -1.44
SOX2P48431 RBBP4P5-201ENST00000398583 1266 ntBASIC6.05□□□□□ -1.44
SOX2P48431 FAM41AY1-201ENST00000421205 906 ntTSL 5 BASIC6.05□□□□□ -1.44
SOX2P48431 SFR1P2-201ENST00000421841 730 ntBASIC6.05□□□□□ -1.44
SOX2P48431 DLEU1-AS1-201ENST00000428276 731 ntTSL 3 BASIC6.05□□□□□ -1.44
SOX2P48431 CBWD5-209ENST00000430059 1242 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
SOX2P48431 AC023128.1-201ENST00000432431 799 ntTSL 3 BASIC6.05□□□□□ -1.44
SOX2P48431 AL049646.2-201ENST00000436848 258 ntTSL 2 BASIC6.05□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 78.9 ms