Protein–RNA interactions for Protein: P28068

HLA-DMB, HLA class II histocompatibility antigen, DM beta chain, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMBP28068 OR4K1-201ENST00000285600 1076 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
HLA-DMBP28068 RAET1L-201ENST00000286380 802 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
HLA-DMBP28068 DNASE1L3-201ENST00000394549 1294 ntAPPRIS P3 TSL 1 (best) BASIC5.15□□□□□ -1.59
HLA-DMBP28068 AL359715.1-201ENST00000404330 555 ntBASIC5.15□□□□□ -1.59
HLA-DMBP28068 MTIF3-203ENST00000405591 889 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
HLA-DMBP28068 MRPL32P1-201ENST00000406301 247 ntBASIC5.15□□□□□ -1.59
HLA-DMBP28068 RSPH14-202ENST00000406876 519 ntTSL 3 BASIC5.15□□□□□ -1.59
HLA-DMBP28068 SETP22-201ENST00000412243 957 ntBASIC5.15□□□□□ -1.59
HLA-DMBP28068 AL713923.1-201ENST00000414071 378 ntTSL 5 BASIC5.15□□□□□ -1.59
HLA-DMBP28068 OR13C7-201ENST00000424348 959 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
HLA-DMBP28068 AC006333.1-204ENST00000429396 648 ntTSL 3 BASIC5.15□□□□□ -1.59
HLA-DMBP28068 AL606804.1-201ENST00000435333 538 ntTSL 3 BASIC5.15□□□□□ -1.59
HLA-DMBP28068 AL451164.3-201ENST00000441377 447 ntTSL 5 BASIC5.15□□□□□ -1.59
HLA-DMBP28068 LRRC28-203ENST00000447360 1235 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
HLA-DMBP28068 SCDP1-201ENST00000455244 1081 ntBASIC5.15□□□□□ -1.59
HLA-DMBP28068 RN7SL382P-201ENST00000482631 282 ntBASIC5.15□□□□□ -1.59
HLA-DMBP28068 EGFLAM-211ENST00000514476 676 ntTSL 2 BASIC5.15□□□□□ -1.59
HLA-DMBP28068 SCARNA18.2-201ENST00000516882 84 ntBASIC5.15□□□□□ -1.59
HLA-DMBP28068 AP003467.1-201ENST00000517397 301 ntTSL 5 BASIC5.15□□□□□ -1.59
HLA-DMBP28068 AC122713.1-201ENST00000518368 1015 ntBASIC5.15□□□□□ -1.59
HLA-DMBP28068 KCNU1-202ENST00000518904 334 ntTSL 2 BASIC5.15□□□□□ -1.59
HLA-DMBP28068 FBXO16-208ENST00000519471 398 ntTSL 2 BASIC5.15□□□□□ -1.59
HLA-DMBP28068 AC087752.2-201ENST00000521219 281 ntBASIC5.15□□□□□ -1.59
HLA-DMBP28068 AC018953.1-201ENST00000523265 730 ntTSL 2 BASIC5.15□□□□□ -1.59
HLA-DMBP28068 AC079089.1-203ENST00000533300 431 ntTSL 5 BASIC5.15□□□□□ -1.59
HLA-DMBP28068 AC073896.2-202ENST00000549860 437 ntTSL 2 BASIC5.15□□□□□ -1.59
HLA-DMBP28068 AL161757.4-202ENST00000557467 737 ntTSL 3 BASIC5.15□□□□□ -1.59
HLA-DMBP28068 AL133297.1-201ENST00000568149 404 ntTSL 2 BASIC5.15□□□□□ -1.59
HLA-DMBP28068 AC015908.3-202ENST00000579367 457 ntTSL 2 BASIC5.15□□□□□ -1.59
HLA-DMBP28068 AC068418.1-201ENST00000582990 404 ntTSL 3 BASIC5.15□□□□□ -1.59
HLA-DMBP28068 OR7E19P-202ENST00000589942 844 ntBASIC5.15□□□□□ -1.59
HLA-DMBP28068 AC020914.7-201ENST00000594477 545 ntBASIC5.15□□□□□ -1.59
HLA-DMBP28068 AC092032.1-201ENST00000603090 165 ntBASIC5.15□□□□□ -1.59
HLA-DMBP28068 ACTG1P22-201ENST00000603793 1099 ntBASIC5.15□□□□□ -1.59
HLA-DMBP28068 PPP3CB-AS1-215ENST00000620559 656 ntTSL 5 BASIC5.15□□□□□ -1.59
HLA-DMBP28068 AC026108.1-201ENST00000635444 547 ntBASIC5.15□□□□□ -1.59
HLA-DMBP28068 AC005618.1-201ENST00000606901 3148 ntBASIC5.15□□□□□ -1.59
HLA-DMBP28068 ATP5BP1-201ENST00000411980 1574 ntBASIC5.15□□□□□ -1.59
HLA-DMBP28068 ZNF160-202ENST00000418871 4219 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
HLA-DMBP28068 ATAD1-202ENST00000328142 2939 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
HLA-DMBP28068 IL31RA-202ENST00000354961 2658 ntAPPRIS ALT2 TSL 5 BASIC5.15□□□□□ -1.59
HLA-DMBP28068 IMPG1-201ENST00000369950 3558 ntAPPRIS P3 TSL 1 (best) BASIC5.15□□□□□ -1.59
HLA-DMBP28068 TRIM34-204ENST00000514226 2493 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
HLA-DMBP28068 AC093844.1-201ENST00000514910 1361 ntBASIC5.15□□□□□ -1.59
HLA-DMBP28068 TRAF5-201ENST00000261464 3972 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
HLA-DMBP28068 TPRG1-204ENST00000433971 2296 ntAPPRIS P1 TSL 2 BASIC5.14□□□□□ -1.59
HLA-DMBP28068 ZNF766-201ENST00000439461 6298 ntAPPRIS P2 TSL 1 (best) BASIC5.14□□□□□ -1.59
HLA-DMBP28068 AC010329.1-201ENST00000593903 8328 ntBASIC5.14□□□□□ -1.59
HLA-DMBP28068 AC244100.3-202ENST00000617328 1721 ntTSL 2 BASIC5.14□□□□□ -1.59
HLA-DMBP28068 AC009812.3-201ENST00000523871 3766 ntTSL 4 BASIC5.14□□□□□ -1.59
HLA-DMBP28068 LINC01684-203ENST00000453784 2908 ntTSL 2 BASIC5.14□□□□□ -1.59
HLA-DMBP28068 BICD1-204ENST00000548411 8811 ntAPPRIS ALT1 TSL 1 (best) BASIC5.14□□□□□ -1.59
HLA-DMBP28068 SEPT7-AS1-203ENST00000437235 3810 ntTSL 5 BASIC5.14□□□□□ -1.59
HLA-DMBP28068 EIF5AL1-201ENST00000520547 3840 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
HLA-DMBP28068 VPS35-201ENST00000299138 6790 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
HLA-DMBP28068 AGXT2-201ENST00000231420 2364 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
HLA-DMBP28068 ARHGEF6-201ENST00000250617 6019 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
HLA-DMBP28068 LINC01297-204ENST00000621052 4222 ntTSL 5 BASIC5.14□□□□□ -1.59
HLA-DMBP28068 FAM186A-203ENST00000543096 2116 ntAPPRIS ALT2 TSL 2 BASIC5.14□□□□□ -1.59
HLA-DMBP28068 DTNA-206ENST00000399121 6490 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
HLA-DMBP28068 AP000547.3-204ENST00000588548 2523 ntBASIC5.14□□□□□ -1.59
HLA-DMBP28068 OCM2-201ENST00000257627 696 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
HLA-DMBP28068 MAPK14-203ENST00000310795 1066 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
HLA-DMBP28068 S100A1-202ENST00000368696 522 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
HLA-DMBP28068 SPRR2D-202ENST00000368756 788 ntAPPRIS P1 TSL 2 BASIC5.14□□□□□ -1.59
HLA-DMBP28068 OR2H1-204ENST00000396792 1294 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
HLA-DMBP28068 RPL7P58-201ENST00000402913 758 ntBASIC5.14□□□□□ -1.59
HLA-DMBP28068 TEX38-202ENST00000415500 566 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
HLA-DMBP28068 AL121983.2-201ENST00000426899 688 ntTSL 3 BASIC5.14□□□□□ -1.59
HLA-DMBP28068 HSFX3-201ENST00000431993 1264 ntAPPRIS P1 TSL 3 BASIC5.14□□□□□ -1.59
HLA-DMBP28068 AC099796.1-201ENST00000433377 683 ntTSL 3 BASIC5.14□□□□□ -1.59
HLA-DMBP28068 GTF2A1-202ENST00000434192 1199 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
HLA-DMBP28068 ZNF138-205ENST00000440155 1066 ntAPPRIS P3 TSL 2 BASIC5.14□□□□□ -1.59
HLA-DMBP28068 RBMY2EP-202ENST00000456360 940 ntBASIC5.14□□□□□ -1.59
HLA-DMBP28068 SULT1D1P-201ENST00000458020 882 ntBASIC5.14□□□□□ -1.59
HLA-DMBP28068 RPSAP48-201ENST00000466509 889 ntBASIC5.14□□□□□ -1.59
HLA-DMBP28068 AL079303.1-201ENST00000486611 463 ntBASIC5.14□□□□□ -1.59
HLA-DMBP28068 ZNF525-204ENST00000491101 569 ntTSL 4 BASIC5.14□□□□□ -1.59
HLA-DMBP28068 TECRP2-201ENST00000503270 928 ntBASIC5.14□□□□□ -1.59
HLA-DMBP28068 RPL7L1P7-201ENST00000509986 724 ntBASIC5.14□□□□□ -1.59
HLA-DMBP28068 C8orf37-AS1-201ENST00000517437 456 ntTSL 3 BASIC5.14□□□□□ -1.59
HLA-DMBP28068 OR4A13P-201ENST00000529316 942 ntBASIC5.14□□□□□ -1.59
HLA-DMBP28068 GLYAT-203ENST00000529732 1070 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
HLA-DMBP28068 ELK3-206ENST00000552142 1242 ntTSL 5 BASIC5.14□□□□□ -1.59
HLA-DMBP28068 AC104574.1-201ENST00000561182 925 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
HLA-DMBP28068 AC018767.3-201ENST00000564185 481 ntTSL 3 BASIC5.14□□□□□ -1.59
HLA-DMBP28068 AC138811.2-201ENST00000567078 764 ntAPPRIS P1 TSL 3 BASIC5.14□□□□□ -1.59
HLA-DMBP28068 AC091932.1-201ENST00000569381 427 ntBASIC5.14□□□□□ -1.59
HLA-DMBP28068 AC004034.1-201ENST00000573260 510 ntTSL 3 BASIC5.14□□□□□ -1.59
HLA-DMBP28068 AC008551.1-201ENST00000575612 405 ntTSL 5 BASIC5.14□□□□□ -1.59
HLA-DMBP28068 MIR4301-201ENST00000577203 66 ntBASIC5.14□□□□□ -1.59
HLA-DMBP28068 LINC01028-201ENST00000586373 1045 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
HLA-DMBP28068 AC011447.2-201ENST00000592921 283 ntBASIC5.14□□□□□ -1.59
HLA-DMBP28068 AL591222.2-201ENST00000604443 754 ntBASIC5.14□□□□□ -1.59
HLA-DMBP28068 AC092960.1-201ENST00000604762 351 ntBASIC5.14□□□□□ -1.59
HLA-DMBP28068 AC004908.1-201ENST00000606572 541 ntBASIC5.14□□□□□ -1.59
HLA-DMBP28068 AC091768.1-201ENST00000609258 930 ntBASIC5.14□□□□□ -1.59
HLA-DMBP28068 OR1N1-202ENST00000619659 939 ntBASIC5.14□□□□□ -1.59
HLA-DMBP28068 AC025287.2-201ENST00000621911 668 ntBASIC5.14□□□□□ -1.59
HLA-DMBP28068 ANGPT2-201ENST00000325203 5416 ntAPPRIS P3 TSL 1 (best) BASIC5.14□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 66.7 ms