Protein–RNA interactions for Protein: P09429

HMGB1, High mobility group protein B1, humanhuman

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P09429 MYL6P4-201ENST00000477911 453 ntBASIC8.38□□□□□ -1.07
HMGB1P09429 AC018475.1-201ENST00000478358 465 ntBASIC8.38□□□□□ -1.07
HMGB1P09429 LARP7P4-201ENST00000481075 878 ntBASIC8.38□□□□□ -1.07
HMGB1P09429 PCNAP1-201ENST00000505363 709 ntBASIC8.38□□□□□ -1.07
HMGB1P09429 AC097460.2-201ENST00000511857 741 ntBASIC8.38□□□□□ -1.07
HMGB1P09429 TGFB3-AS1-201ENST00000553732 580 ntTSL 4 BASIC8.38□□□□□ -1.07
HMGB1P09429 AC013652.1-202ENST00000561058 570 ntTSL 4 BASIC8.38□□□□□ -1.07
HMGB1P09429 IGLJCOR18-201ENST00000584002 424 ntBASIC8.38□□□□□ -1.07
HMGB1P09429 IZUMO3-203ENST00000604921 743 ntAPPRIS P2 TSL 5 BASIC8.38□□□□□ -1.07
HMGB1P09429 AL591686.2-201ENST00000608241 475 ntTSL 4 BASIC8.38□□□□□ -1.07
HMGB1P09429 pRNA.9-201ENST00000618609 89 ntBASIC8.38□□□□□ -1.07
HMGB1P09429 RPSAP68-201ENST00000625020 438 ntBASIC8.38□□□□□ -1.07
HMGB1P09429 AC021079.1-201ENST00000625268 907 ntTSL 3 BASIC8.38□□□□□ -1.07
HMGB1P09429 AL139254.3-201ENST00000641097 674 ntBASIC8.38□□□□□ -1.07
HMGB1P09429 AC119674.1-220ENST00000641502 1048 ntBASIC8.38□□□□□ -1.07
HMGB1P09429 SPATA31C2-201ENST00000324915 3777 ntBASIC8.38□□□□□ -1.07
HMGB1P09429 SSH1-202ENST00000326495 13040 ntAPPRIS P3 TSL 1 (best) BASIC8.38□□□□□ -1.07
HMGB1P09429 MAPK10-383ENST00000642032 3390 ntBASIC8.38□□□□□ -1.07
HMGB1P09429 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
HMGB1P09429 AC096921.2-201ENST00000561507 1916 ntBASIC8.38□□□□□ -1.07
HMGB1P09429 TRAF5-202ENST00000336184 3972 ntAPPRIS P1 TSL 5 BASIC8.38□□□□□ -1.07
HMGB1P09429 DNHD1-212ENST00000527990 14298 ntAPPRIS P1 TSL 5 BASIC8.38□□□□□ -1.07
HMGB1P09429 TGFBR3-202ENST00000370399 4550 ntAPPRIS ALT1 TSL 1 (best) BASIC8.38□□□□□ -1.07
HMGB1P09429 GRIK2-206ENST00000413795 4876 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
HMGB1P09429 SUPT7L-202ENST00000404798 4114 ntTSL 2 BASIC8.38□□□□□ -1.07
HMGB1P09429 AL161912.4-201ENST00000623889 2468 ntBASIC8.38□□□□□ -1.07
HMGB1P09429 TPTE2P2-201ENST00000403471 1466 ntBASIC8.38□□□□□ -1.07
HMGB1P09429 SORBS2-230ENST00000448662 4356 ntTSL 2 BASIC8.38□□□□□ -1.07
HMGB1P09429 DZANK1-203ENST00000357236 3739 ntAPPRIS ALT2 TSL 5 BASIC8.38□□□□□ -1.07
HMGB1P09429 PROX1-AS1-202ENST00000433082 5266 ntTSL 5 BASIC8.38□□□□□ -1.07
HMGB1P09429 ALPK2-201ENST00000361673 7303 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
HMGB1P09429 DNA2-203ENST00000399180 3207 ntTSL 2 BASIC8.37□□□□□ -1.07
HMGB1P09429 C1D-202ENST00000407324 1379 ntTSL 3 BASIC8.37□□□□□ -1.07
HMGB1P09429 ZBED3-AS1-216ENST00000515356 1987 ntTSL 2 BASIC8.37□□□□□ -1.07
HMGB1P09429 ASCC1-203ENST00000342444 2270 ntTSL 2 BASIC8.37□□□□□ -1.07
HMGB1P09429 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC8.37□□□□□ -1.07
HMGB1P09429 NRCAM-203ENST00000379024 5782 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
HMGB1P09429 EPG5-201ENST00000282041 12633 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
HMGB1P09429 ZC3H14-205ENST00000393514 2195 ntTSL 5 BASIC8.37□□□□□ -1.07
HMGB1P09429 NFAT5-202ENST00000354436 13229 ntAPPRIS P4 TSL 1 (best) BASIC8.37□□□□□ -1.07
HMGB1P09429 SCGB1A1-201ENST00000278282 441 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
HMGB1P09429 KIF16B-202ENST00000355755 606 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
HMGB1P09429 RNU11-6P-201ENST00000391127 133 ntBASIC8.37□□□□□ -1.07
HMGB1P09429 AC104297.1-201ENST00000393779 870 ntBASIC8.37□□□□□ -1.07
HMGB1P09429 FAUP2-201ENST00000394301 401 ntBASIC8.37□□□□□ -1.07
HMGB1P09429 AC008171.1-201ENST00000395058 200 ntBASIC8.37□□□□□ -1.07
HMGB1P09429 SNX24-202ENST00000395451 1050 ntTSL 3 BASIC8.37□□□□□ -1.07
HMGB1P09429 AC023469.1-201ENST00000409243 469 ntTSL 3 BASIC8.37□□□□□ -1.07
HMGB1P09429 UNC50-203ENST00000409347 1276 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
HMGB1P09429 RNA5SP177-201ENST00000410122 107 ntBASIC8.37□□□□□ -1.07
HMGB1P09429 RNU2-5P-201ENST00000410533 180 ntBASIC8.37□□□□□ -1.07
HMGB1P09429 AC097713.1-201ENST00000418025 562 ntTSL 4 BASIC8.37□□□□□ -1.07
HMGB1P09429 MTCO1P57-201ENST00000432182 261 ntBASIC8.37□□□□□ -1.07
HMGB1P09429 OR51P1P-201ENST00000447547 942 ntBASIC8.37□□□□□ -1.07
HMGB1P09429 CEACAMP5-201ENST00000448037 961 ntBASIC8.37□□□□□ -1.07
HMGB1P09429 AC019080.2-201ENST00000453859 394 ntBASIC8.37□□□□□ -1.07
HMGB1P09429 WBP1LP1-201ENST00000460451 896 ntBASIC8.37□□□□□ -1.07
HMGB1P09429 AL928654.1-201ENST00000476081 354 ntBASIC8.37□□□□□ -1.07
HMGB1P09429 LINC01184-206ENST00000508878 968 ntTSL 5 BASIC8.37□□□□□ -1.07
HMGB1P09429 AC067904.2-201ENST00000517322 1283 ntBASIC8.37□□□□□ -1.07
HMGB1P09429 LINC01603-202ENST00000519557 712 ntTSL 3 BASIC8.37□□□□□ -1.07
HMGB1P09429 AC018442.3-201ENST00000523025 183 ntBASIC8.37□□□□□ -1.07
HMGB1P09429 AF117829.1-209ENST00000523995 767 ntTSL 2 BASIC8.37□□□□□ -1.07
HMGB1P09429 AC055860.1-201ENST00000525523 688 ntTSL 5 BASIC8.37□□□□□ -1.07
HMGB1P09429 NDUFA3P2-201ENST00000531434 232 ntBASIC8.37□□□□□ -1.07
HMGB1P09429 TAS2R46-201ENST00000533467 930 ntAPPRIS P1 BASIC8.37□□□□□ -1.07
HMGB1P09429 HPS5-207ENST00000537258 1275 ntTSL 5 BASIC8.37□□□□□ -1.07
HMGB1P09429 DDIT3-204ENST00000551116 1067 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
HMGB1P09429 AC090971.3-201ENST00000557871 1041 ntBASIC8.37□□□□□ -1.07
HMGB1P09429 AC092868.3-201ENST00000560515 784 ntBASIC8.37□□□□□ -1.07
HMGB1P09429 AC025430.1-201ENST00000561324 498 ntTSL 3 BASIC8.37□□□□□ -1.07
HMGB1P09429 C16orf62-224ENST00000567245 573 ntTSL 5 BASIC8.37□□□□□ -1.07
HMGB1P09429 AC111186.1-201ENST00000604684 130 ntBASIC8.37□□□□□ -1.07
HMGB1P09429 LINC00458-206ENST00000607494 849 ntTSL 3 BASIC8.37□□□□□ -1.07
HMGB1P09429 ELMO2P1-201ENST00000611569 473 ntTSL 5 BASIC8.37□□□□□ -1.07
HMGB1P09429 FRG2MP-201ENST00000613317 856 ntBASIC8.37□□□□□ -1.07
HMGB1P09429 PPP3CB-AS1-215ENST00000620559 656 ntTSL 5 BASIC8.37□□□□□ -1.07
HMGB1P09429 PSMD10P2-202ENST00000626135 819 ntTSL 5 BASIC8.37□□□□□ -1.07
HMGB1P09429 CORIN-201ENST00000273857 4852 ntAPPRIS P2 TSL 1 (best) BASIC8.37□□□□□ -1.07
HMGB1P09429 MUC4-209ENST00000463781 17110 ntAPPRIS ALT2 TSL 5 BASIC8.37□□□□□ -1.07
HMGB1P09429 PPP4R3CP-201ENST00000412172 3131 ntAPPRIS P1 BASIC8.37□□□□□ -1.07
HMGB1P09429 ESRRG-201ENST00000359162 5197 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
HMGB1P09429 SETD5-205ENST00000407969 6463 ntTSL 5 BASIC8.37□□□□□ -1.07
HMGB1P09429 AL117339.5-201ENST00000640275 3955 ntAPPRIS P1 TSL 5 BASIC8.37□□□□□ -1.07
HMGB1P09429 SIPA1L1-201ENST00000358550 6539 ntAPPRIS ALT1 TSL 2 BASIC8.37□□□□□ -1.07
HMGB1P09429 NSD3-206ENST00000527502 4471 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
HMGB1P09429 SLC2A14-201ENST00000340749 3699 ntAPPRIS ALT2 TSL 2 BASIC8.36□□□□□ -1.07
HMGB1P09429 AC010168.2-201ENST00000562691 5428 ntBASIC8.36□□□□□ -1.07
HMGB1P09429 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
HMGB1P09429 SORBS1-219ENST00000607232 4374 ntAPPRIS ALT2 TSL 5 BASIC8.36□□□□□ -1.07
HMGB1P09429 NPIPB5-205ENST00000424340 3801 ntAPPRIS P2 TSL 1 (best) BASIC8.36□□□□□ -1.07
HMGB1P09429 HYDIN-215ENST00000541601 3058 ntAPPRIS ALT2 TSL 2 BASIC8.36□□□□□ -1.07
HMGB1P09429 ATP10D-203ENST00000504445 2550 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
HMGB1P09429 ARNT-201ENST00000354396 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC8.36□□□□□ -1.07
HMGB1P09429 AC009095.1-201ENST00000388909 1326 ntTSL 5 BASIC8.36□□□□□ -1.07
HMGB1P09429 LINC01677-204ENST00000635342 1329 ntTSL 5 BASIC8.36□□□□□ -1.07
HMGB1P09429 MAP3K20-AS1-203ENST00000423106 2538 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
HMGB1P09429 AC091045.1-201ENST00000561460 2277 ntTSL 5 BASIC8.36□□□□□ -1.07
HMGB1P09429 LINC01222-201ENST00000427439 1785 ntTSL 2 BASIC8.36□□□□□ -1.07
HMGB1P09429 ZCCHC8-201ENST00000536306 2904 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
Retrieved 100 of 98,524 protein–RNA pairs in 96.6 ms