Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 MALAT1-212ENST00000618132 725 ntTSL 2 BASIC7.25□□□□□ -1.25
RB1P06400 EDRF1-AS1-214ENST00000622798 526 ntTSL 5 BASIC7.25□□□□□ -1.25
RB1P06400 OR8D2-201ENST00000624618 1051 ntAPPRIS P1 BASIC7.25□□□□□ -1.25
RB1P06400 SCML1-203ENST00000380045 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC7.25□□□□□ -1.25
RB1P06400 ZNF462-201ENST00000277225 10414 ntAPPRIS P2 TSL 1 (best) BASIC7.25□□□□□ -1.25
RB1P06400 API5P1-201ENST00000424316 1510 ntBASIC7.25□□□□□ -1.25
RB1P06400 NPHP1-201ENST00000316534 3756 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
RB1P06400 MITF-201ENST00000314557 1798 ntAPPRIS ALT1 TSL 1 (best) BASIC7.25□□□□□ -1.25
RB1P06400 CATSPER2-202ENST00000381761 1758 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
RB1P06400 ZFP37-201ENST00000374227 6266 ntAPPRIS P3 TSL 1 (best) BASIC7.25□□□□□ -1.25
RB1P06400 CASP5-201ENST00000260315 1414 ntTSL 5 BASIC7.25□□□□□ -1.25
RB1P06400 KIDINS220-201ENST00000256707 7361 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
RB1P06400 ANO6-201ENST00000320560 5975 ntAPPRIS P3 TSL 1 (best) BASIC7.25□□□□□ -1.25
RB1P06400 HUWE1-203ENST00000342160 14796 ntAPPRIS P1 TSL 5 BASIC7.25□□□□□ -1.25
RB1P06400 NRCAM-203ENST00000379024 5782 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
RB1P06400 SIPA1L1-201ENST00000358550 6539 ntAPPRIS ALT1 TSL 2 BASIC7.25□□□□□ -1.25
RB1P06400 CPB2-AS1-202ENST00000606243 2185 ntTSL 2 BASIC7.25□□□□□ -1.25
RB1P06400 AL359922.2-201ENST00000581788 3017 ntBASIC7.25□□□□□ -1.25
RB1P06400 TMEM170B-201ENST00000379426 8362 ntAPPRIS P1 TSL 4 BASIC7.25□□□□□ -1.25
RB1P06400 ADAM2-201ENST00000265708 2672 ntAPPRIS P3 TSL 1 (best) BASIC7.24□□□□□ -1.25
RB1P06400 ATAD1-202ENST00000328142 2939 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
RB1P06400 ERICH3-202ENST00000420661 2068 ntAPPRIS ALT2 TSL 1 (best) BASIC7.24□□□□□ -1.25
RB1P06400 SPATA31A1-201ENST00000377647 4256 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
RB1P06400 SPATA31A7-206ENST00000619167 4256 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
RB1P06400 CCDC93-201ENST00000319432 6896 ntAPPRIS ALT1 TSL 5 BASIC7.24□□□□□ -1.25
RB1P06400 CCDC93-202ENST00000376300 6899 ntAPPRIS P2 TSL 1 (best) BASIC7.24□□□□□ -1.25
RB1P06400 ALG13-224ENST00000610588 4175 ntTSL 2 BASIC7.24□□□□□ -1.25
RB1P06400 ZHX3-205ENST00000432768 3551 ntAPPRIS P1 TSL 2 BASIC7.24□□□□□ -1.25
RB1P06400 ELMO1-202ENST00000396040 1982 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
RB1P06400 NSUN6-201ENST00000377304 2201 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
RB1P06400 AC019197.1-202ENST00000414885 2639 ntTSL 5 BASIC7.24□□□□□ -1.25
RB1P06400 TRRAP-207ENST00000628380 12644 ntAPPRIS ALT2 TSL 5 BASIC7.24□□□□□ -1.25
RB1P06400 FAM227A-205ENST00000535113 10322 ntAPPRIS ALT2 TSL 5 BASIC7.24□□□□□ -1.25
RB1P06400 AP003175.1-201ENST00000641383 6658 ntBASIC7.24□□□□□ -1.25
RB1P06400 TRIM5-203ENST00000396847 3170 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
RB1P06400 PPIAP24-201ENST00000328558 471 ntBASIC7.24□□□□□ -1.25
RB1P06400 HSPB11-202ENST00000371376 765 ntTSL 3 BASIC7.24□□□□□ -1.25
RB1P06400 CD52-201ENST00000374213 468 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
RB1P06400 SERHL2-204ENST00000407614 521 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
RB1P06400 LINC01687-201ENST00000416327 795 ntTSL 3 BASIC7.24□□□□□ -1.25
RB1P06400 DSCR4-IT1-201ENST00000417138 424 ntTSL 5 BASIC7.24□□□□□ -1.25
RB1P06400 ZEB2-AS1-203ENST00000428623 436 ntTSL 2 BASIC7.24□□□□□ -1.25
RB1P06400 PAICSP2-201ENST00000429118 1150 ntBASIC7.24□□□□□ -1.25
RB1P06400 OSTN-AS1-201ENST00000430375 515 ntTSL 5 BASIC7.24□□□□□ -1.25
RB1P06400 NFIA-AS2-203ENST00000438559 1275 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
RB1P06400 MIR4432HG-201ENST00000441598 470 ntTSL 3 BASIC7.24□□□□□ -1.25
RB1P06400 BCAP29-207ENST00000445771 1157 ntTSL 5 BASIC7.24□□□□□ -1.25
RB1P06400 Z83838.1-202ENST00000456225 839 ntBASIC7.24□□□□□ -1.25
RB1P06400 RPL7AP23-201ENST00000482625 776 ntBASIC7.24□□□□□ -1.25
RB1P06400 CBX1-205ENST00000495350 550 ntTSL 2 BASIC7.24□□□□□ -1.25
RB1P06400 AC007106.1-201ENST00000509666 600 ntTSL 4 BASIC7.24□□□□□ -1.25
RB1P06400 AC108063.1-201ENST00000513586 414 ntTSL 3 BASIC7.24□□□□□ -1.25
RB1P06400 AC008663.1-201ENST00000519821 455 ntTSL 4 BASIC7.24□□□□□ -1.25
RB1P06400 AP003059.1-201ENST00000526206 432 ntTSL 5 BASIC7.24□□□□□ -1.25
RB1P06400 AC078864.1-201ENST00000547538 512 ntTSL 4 BASIC7.24□□□□□ -1.25
RB1P06400 AC023827.2-201ENST00000566880 1061 ntBASIC7.24□□□□□ -1.25
RB1P06400 MIR4502-201ENST00000580432 81 ntBASIC7.24□□□□□ -1.25
RB1P06400 AC010327.2-201ENST00000587647 488 ntBASIC7.24□□□□□ -1.25
RB1P06400 PCA3_2.1-201ENST00000612507 409 ntBASIC7.24□□□□□ -1.25
RB1P06400 AC130456.6-201ENST00000623745 765 ntBASIC7.24□□□□□ -1.25
RB1P06400 SNORA16A-202ENST00000628458 135 ntBASIC7.24□□□□□ -1.25
RB1P06400 OPALIN-202ENST00000393870 3578 ntTSL 3 BASIC7.24□□□□□ -1.25
RB1P06400 ACACA-226ENST00000612895 9624 ntTSL 5 BASIC7.24□□□□□ -1.25
RB1P06400 GPR1-209ENST00000612892 2565 ntAPPRIS P1 TSL 4 BASIC7.24□□□□□ -1.25
RB1P06400 AL512624.2-201ENST00000621705 2566 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
RB1P06400 SLC16A4-210ENST00000541986 2496 ntTSL 2 BASIC7.24□□□□□ -1.25
RB1P06400 PSMC6-218ENST00000606149 1560 ntAPPRIS ALT1 TSL 1 (best) BASIC7.24□□□□□ -1.25
RB1P06400 NPIPB13-201ENST00000520915 3584 ntAPPRIS P1 TSL 5 BASIC7.24□□□□□ -1.25
RB1P06400 RAB14-201ENST00000373840 4145 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
RB1P06400 ATP13A4-204ENST00000400270 1458 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
RB1P06400 TP63-207ENST00000418709 2810 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
RB1P06400 OR6C75-202ENST00000641576 4569 ntAPPRIS P1 BASIC7.23□□□□□ -1.25
RB1P06400 MLH1-206ENST00000435176 2428 ntTSL 2 BASIC7.23□□□□□ -1.25
RB1P06400 WDR89-202ENST00000394942 2993 ntAPPRIS P1 TSL 5 BASIC7.23□□□□□ -1.25
RB1P06400 SYCP1-202ENST00000369522 3522 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
RB1P06400 LRRTM3-201ENST00000361320 4358 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
RB1P06400 MAPK10-379ENST00000642013 1385 ntBASIC7.23□□□□□ -1.25
RB1P06400 ZNF521-203ENST00000538137 4253 ntAPPRIS P1 TSL 2 BASIC7.23□□□□□ -1.25
RB1P06400 IBTK-201ENST00000306270 6054 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
RB1P06400 IPCEF1-201ENST00000265198 6689 ntAPPRIS P3 TSL 1 (best) BASIC7.23□□□□□ -1.25
RB1P06400 DEUP1-209ENST00000531792 1656 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
RB1P06400 ADAL-202ENST00000422466 3767 ntTSL 5 BASIC7.23□□□□□ -1.25
RB1P06400 FZD3-204ENST00000537916 13740 ntAPPRIS P1 TSL 2 BASIC7.23□□□□□ -1.25
RB1P06400 KCNMA1-266ENST00000639601 11920 ntAPPRIS ALT2 TSL 5 BASIC7.23□□□□□ -1.25
RB1P06400 RAET1L-201ENST00000286380 802 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
RB1P06400 OR4F5-201ENST00000335137 1054 ntAPPRIS P1 BASIC7.23□□□□□ -1.25
RB1P06400 RNA5SP188-201ENST00000362916 129 ntBASIC7.23□□□□□ -1.25
RB1P06400 AP004243.1-202ENST00000398983 969 ntTSL 5 BASIC7.23□□□□□ -1.25
RB1P06400 YWHAZP6-201ENST00000399764 738 ntBASIC7.23□□□□□ -1.25
RB1P06400 RPL31-202ENST00000409000 641 ntTSL 2 BASIC7.23□□□□□ -1.25
RB1P06400 RANP6-201ENST00000413691 644 ntBASIC7.23□□□□□ -1.25
RB1P06400 AKR1D1-203ENST00000432161 1236 ntTSL 2 BASIC7.23□□□□□ -1.25
RB1P06400 CDK7P1-201ENST00000434574 693 ntBASIC7.23□□□□□ -1.25
RB1P06400 AL445465.1-204ENST00000440220 447 ntTSL 3 BASIC7.23□□□□□ -1.25
RB1P06400 RPL26P30-201ENST00000453533 435 ntBASIC7.23□□□□□ -1.25
RB1P06400 AC094085.1-201ENST00000468914 584 ntBASIC7.23□□□□□ -1.25
RB1P06400 AC083806.1-201ENST00000468934 316 ntBASIC7.23□□□□□ -1.25
RB1P06400 RPL24-206ENST00000495401 478 ntTSL 2 BASIC7.23□□□□□ -1.25
RB1P06400 AC022973.4-201ENST00000524100 917 ntTSL 2 BASIC7.23□□□□□ -1.25
RB1P06400 CRYAB-207ENST00000527950 887 ntAPPRIS P1 TSL 5 BASIC7.23□□□□□ -1.25
Retrieved 100 of 98,524 protein–RNA pairs in 12 ms