Protein–RNA interactions for Protein: P02549

SPTA1, Spectrin alpha chain, erythrocytic 1, humanhuman

Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1P02549 OR52H2P-201ENST00000514607 902 ntBASIC6.18□□□□□ -1.42
SPTA1P02549 AC109830.1-202ENST00000515491 860 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
SPTA1P02549 AC135983.3-201ENST00000528049 1226 ntBASIC6.18□□□□□ -1.42
SPTA1P02549 GPRC5D-AS1-208ENST00000545914 566 ntTSL 3 BASIC6.18□□□□□ -1.42
SPTA1P02549 RACGAP1-216ENST00000548961 387 ntTSL 3 BASIC6.18□□□□□ -1.42
SPTA1P02549 CBLN2-208ENST00000584764 543 ntTSL 4 BASIC6.18□□□□□ -1.42
SPTA1P02549 AC026898.1-201ENST00000586404 571 ntBASIC6.18□□□□□ -1.42
SPTA1P02549 AC005546.1-201ENST00000591837 391 ntTSL 3 BASIC6.18□□□□□ -1.42
SPTA1P02549 AL590032.1-201ENST00000604920 252 ntBASIC6.18□□□□□ -1.42
SPTA1P02549 EDRF1-AS1-210ENST00000613304 569 ntTSL 5 BASIC6.18□□□□□ -1.42
SPTA1P02549 CCT5-215ENST00000625723 135 ntTSL 5 BASIC6.18□□□□□ -1.42
SPTA1P02549 IL1RAP-202ENST00000317757 5413 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
SPTA1P02549 ADAM28-202ENST00000437154 2085 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
SPTA1P02549 SLF2-202ENST00000370269 3712 ntAPPRIS ALT2 TSL 1 (best) BASIC6.18□□□□□ -1.42
SPTA1P02549 GPR89A-213ENST00000534502 1644 ntTSL 2 BASIC6.18□□□□□ -1.42
SPTA1P02549 LINC00652-201ENST00000412553 3299 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
SPTA1P02549 DNAH3-201ENST00000261383 12394 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
SPTA1P02549 TCL6-201ENST00000352367 3398 ntTSL 2 BASIC6.18□□□□□ -1.42
SPTA1P02549 OR52K3P-202ENST00000641797 1729 ntBASIC6.18□□□□□ -1.42
SPTA1P02549 CHD2-208ENST00000626874 7764 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
SPTA1P02549 NEMP2-202ENST00000409150 6168 ntAPPRIS P1 TSL 2 BASIC6.17□□□□□ -1.42
SPTA1P02549 MC2R-201ENST00000327606 3656 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
SPTA1P02549 KIDINS220-201ENST00000256707 7361 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
SPTA1P02549 TMPRSS11D-201ENST00000283916 2817 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
SPTA1P02549 BBX-207ENST00000416476 2178 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
SPTA1P02549 WDR48-201ENST00000302313 3707 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
SPTA1P02549 GPATCH2L-201ENST00000261530 14007 ntTSL 2 BASIC6.17□□□□□ -1.42
SPTA1P02549 LINC01442-201ENST00000414201 704 ntTSL 2 BASIC6.17□□□□□ -1.42
SPTA1P02549 RPL21P50-201ENST00000417698 477 ntBASIC6.17□□□□□ -1.42
SPTA1P02549 AL358394.1-201ENST00000422807 535 ntTSL 2 BASIC6.17□□□□□ -1.42
SPTA1P02549 AC016766.1-201ENST00000429636 714 ntTSL 3 BASIC6.17□□□□□ -1.42
SPTA1P02549 PTCSC2-201ENST00000430058 204 ntTSL 2 BASIC6.17□□□□□ -1.42
SPTA1P02549 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC6.17□□□□□ -1.42
SPTA1P02549 AC099328.2-201ENST00000465347 455 ntTSL 3 BASIC6.17□□□□□ -1.42
SPTA1P02549 RNA5SP287-201ENST00000516358 103 ntBASIC6.17□□□□□ -1.42
SPTA1P02549 AC104109.4-202ENST00000518409 1082 ntTSL 2 BASIC6.17□□□□□ -1.42
SPTA1P02549 STRADA-207ENST00000578008 1153 ntTSL 5 BASIC6.17□□□□□ -1.42
SPTA1P02549 ZNF790-AS1-201ENST00000587278 653 ntTSL 5 BASIC6.17□□□□□ -1.42
SPTA1P02549 AC104184.1-201ENST00000607513 721 ntBASIC6.17□□□□□ -1.42
SPTA1P02549 MIR6811-201ENST00000620409 58 ntBASIC6.17□□□□□ -1.42
SPTA1P02549 OR7E91P-202ENST00000642062 1198 ntBASIC6.17□□□□□ -1.42
SPTA1P02549 TMBIM6-202ENST00000395006 2598 ntAPPRIS P3 TSL 1 (best) BASIC6.17□□□□□ -1.42
SPTA1P02549 TCL6-203ENST00000459662 3307 ntTSL 2 BASIC6.17□□□□□ -1.42
SPTA1P02549 AC010487.3-201ENST00000634278 1966 ntAPPRIS P1 TSL 2 BASIC6.17□□□□□ -1.42
SPTA1P02549 ECD-205ENST00000454759 2084 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
SPTA1P02549 ASPH-230ENST00000541428 2550 ntAPPRIS ALT2 TSL 2 BASIC6.17□□□□□ -1.42
SPTA1P02549 ZNF396-201ENST00000306346 2788 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
SPTA1P02549 HKR1-223ENST00000591471 3472 ntTSL 2 BASIC6.17□□□□□ -1.42
SPTA1P02549 COLCA1-205ENST00000620864 8098 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
SPTA1P02549 CHRDL1-203ENST00000394797 2413 ntAPPRIS P3 TSL 5 BASIC6.17□□□□□ -1.42
SPTA1P02549 AL590143.1-201ENST00000405071 138 ntBASIC6.17□□□□□ -1.42
SPTA1P02549 KIAA0232-202ENST00000425103 7771 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
SPTA1P02549 RPS10P21-201ENST00000430654 475 ntBASIC6.17□□□□□ -1.42
SPTA1P02549 GTF2A1-202ENST00000434192 1199 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
SPTA1P02549 RN7SL610P-201ENST00000463845 291 ntBASIC6.17□□□□□ -1.42
SPTA1P02549 PSMA2P2-201ENST00000504319 686 ntBASIC6.17□□□□□ -1.42
SPTA1P02549 AC244502.1-201ENST00000514473 1951 ntTSL 2 BASIC6.17□□□□□ -1.42
SPTA1P02549 AC106882.1-201ENST00000515789 2371 ntTSL 2 BASIC6.17□□□□□ -1.42
SPTA1P02549 AP001831.1-201ENST00000524610 411 ntTSL 3 BASIC6.17□□□□□ -1.42
SPTA1P02549 MYPN-204ENST00000540630 5707 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
SPTA1P02549 ZNF525-206ENST00000593918 590 ntTSL 5 BASIC6.17□□□□□ -1.42
SPTA1P02549 AC068802.1-201ENST00000603420 732 ntBASIC6.17□□□□□ -1.42
SPTA1P02549 AL512662.1-201ENST00000624850 2251 ntBASIC6.17□□□□□ -1.42
SPTA1P02549 AL450990.1-201ENST00000632868 582 ntTSL 4 BASIC6.17□□□□□ -1.42
SPTA1P02549 DICER1-202ENST00000393063 10220 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
SPTA1P02549 ZNF502-204ENST00000449836 3173 ntAPPRIS P1 TSL 3 BASIC6.17□□□□□ -1.42
SPTA1P02549 STAU1-210ENST00000614381 3054 ntAPPRIS ALT2 TSL 5 BASIC6.17□□□□□ -1.42
SPTA1P02549 GTF2E1-201ENST00000283875 3012 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
SPTA1P02549 AL358394.2-201ENST00000427229 3637 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
SPTA1P02549 ARIH1-201ENST00000379887 21681 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
SPTA1P02549 RBFOX2-205ENST00000405409 6932 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
SPTA1P02549 ZNF716-201ENST00000420713 5197 ntAPPRIS P1 TSL 4 BASIC6.16□□□□□ -1.42
SPTA1P02549 EIF1B-201ENST00000232905 1010 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
SPTA1P02549 AC023490.2-201ENST00000359859 470 ntBASIC6.16□□□□□ -1.42
SPTA1P02549 AL157884.1-201ENST00000424561 454 ntBASIC6.16□□□□□ -1.42
SPTA1P02549 AC083862.1-201ENST00000427378 1242 ntBASIC6.16□□□□□ -1.42
SPTA1P02549 RPSAP65-201ENST00000429660 595 ntBASIC6.16□□□□□ -1.42
SPTA1P02549 PNKDP1-201ENST00000435914 430 ntBASIC6.16□□□□□ -1.42
SPTA1P02549 KRTAP8-2P-201ENST00000440620 186 ntBASIC6.16□□□□□ -1.42
SPTA1P02549 AL049651.1-201ENST00000440798 719 ntTSL 5 BASIC6.16□□□□□ -1.42
SPTA1P02549 AC004870.2-201ENST00000445615 831 ntTSL 3 BASIC6.16□□□□□ -1.42
SPTA1P02549 AC108688.1-201ENST00000485817 713 ntBASIC6.16□□□□□ -1.42
SPTA1P02549 OSMR-AS1-201ENST00000506463 800 ntTSL 3 BASIC6.16□□□□□ -1.42
SPTA1P02549 AC120036.3-201ENST00000517826 292 ntBASIC6.16□□□□□ -1.42
SPTA1P02549 AC008680.1-201ENST00000523398 283 ntTSL 3 BASIC6.16□□□□□ -1.42
SPTA1P02549 AP001011.1-202ENST00000581172 667 ntTSL 3 BASIC6.16□□□□□ -1.42
SPTA1P02549 AL357140.4-201ENST00000636827 412 ntBASIC6.16□□□□□ -1.42
SPTA1P02549 BRDT-205ENST00000399546 3357 ntAPPRIS ALT2 TSL 2 BASIC6.16□□□□□ -1.42
SPTA1P02549 RIF1-205ENST00000444746 7897 ntAPPRIS P3 TSL 1 (best) BASIC6.16□□□□□ -1.42
SPTA1P02549 ARPP21-207ENST00000417925 3086 ntTSL 2 BASIC6.16□□□□□ -1.42
SPTA1P02549 AC008676.2-202ENST00000509655 1992 ntTSL 2 BASIC6.16□□□□□ -1.42
SPTA1P02549 MUC5AC-201ENST00000621226 17448 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
SPTA1P02549 AC078880.4-201ENST00000617627 1749 ntBASIC6.16□□□□□ -1.42
SPTA1P02549 DNAH10-210ENST00000638045 13678 ntAPPRIS P2 TSL 5 BASIC6.16□□□□□ -1.42
SPTA1P02549 AC079753.1-201ENST00000623243 3868 ntBASIC6.16□□□□□ -1.42
SPTA1P02549 LRP2BP-203ENST00000510776 3055 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
SPTA1P02549 TSHZ2-203ENST00000603338 3803 ntTSL 2 BASIC6.16□□□□□ -1.42
SPTA1P02549 CLEC12A-201ENST00000304361 1549 ntAPPRIS P4 TSL 1 (best) BASIC6.16□□□□□ -1.42
SPTA1P02549 C1GALT1-201ENST00000223122 6078 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
SPTA1P02549 SLC25A12-202ENST00000422440 2979 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 129.5 ms