Protein–RNA interactions for Protein: O60224

SSX4, Protein SSX4, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX4O60224 AC233280.20-201ENST00000637412 416 ntBASIC6.23□□□□□ -1.41
SSX4O60224 OR8A1-204ENST00000642111 1145 ntBASIC6.23□□□□□ -1.41
SSX4O60224 GBP1-201ENST00000370473 3035 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
SSX4O60224 APOL6-201ENST00000409652 10121 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
SSX4O60224 CASP10-203ENST00000313728 1521 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
SSX4O60224 MT-CO1-201ENST00000361624 1542 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
SSX4O60224 LINC01297-204ENST00000621052 4222 ntTSL 5 BASIC6.23□□□□□ -1.41
SSX4O60224 USP1-202ENST00000371146 3507 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
SSX4O60224 KLHL41-201ENST00000284669 2464 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
SSX4O60224 POT1-AS1-203ENST00000435452 2147 ntTSL 2 BASIC6.23□□□□□ -1.41
SSX4O60224 NARS2-204ENST00000528850 2137 ntTSL 5 BASIC6.23□□□□□ -1.41
SSX4O60224 ZNF107-206ENST00000620827 5685 ntAPPRIS P4 TSL 4 BASIC6.23□□□□□ -1.41
SSX4O60224 IL5RA-201ENST00000256452 2001 ntAPPRIS P4 TSL 1 (best) BASIC6.23□□□□□ -1.41
SSX4O60224 FAM160A1-203ENST00000505231 4156 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
SSX4O60224 TBC1D32-204ENST00000398212 3824 ntAPPRIS P2 TSL 5 BASIC6.23□□□□□ -1.41
SSX4O60224 CFI-205ENST00000512148 1914 ntAPPRIS ALT2 TSL 5 BASIC6.23□□□□□ -1.41
SSX4O60224 THEMIS-206ENST00000630369 2786 ntAPPRIS ALT2 TSL 1 (best) BASIC6.23□□□□□ -1.41
SSX4O60224 AC007159.1-201ENST00000566529 4706 ntBASIC6.23□□□□□ -1.41
SSX4O60224 IL31RA-202ENST00000354961 2658 ntAPPRIS ALT2 TSL 5 BASIC6.22□□□□□ -1.41
SSX4O60224 LINC01994-201ENST00000496220 1808 ntTSL 2 BASIC6.22□□□□□ -1.41
SSX4O60224 PPP1R11-201ENST00000376758 1723 ntTSL 2 BASIC6.22□□□□□ -1.41
SSX4O60224 MECOM-209ENST00000472280 3593 ntTSL 5 BASIC6.22□□□□□ -1.41
SSX4O60224 ELMO1-202ENST00000396040 1982 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
SSX4O60224 DEPDC1B-201ENST00000265036 2499 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
SSX4O60224 SGO2-201ENST00000357799 4214 ntAPPRIS P2 TSL 1 (best) BASIC6.22□□□□□ -1.41
SSX4O60224 ELOVL6-202ENST00000394607 6454 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
SSX4O60224 MS4A6A-213ENST00000530839 1383 ntAPPRIS P1 TSL 2 BASIC6.22□□□□□ -1.41
SSX4O60224 LINC01606-203ENST00000519160 2292 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
SSX4O60224 CEACAM1-203ENST00000352591 3170 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
SSX4O60224 AC022826.2-201ENST00000358757 776 ntAPPRIS P1 TSL 4 BASIC6.22□□□□□ -1.41
SSX4O60224 AC012358.1-201ENST00000366153 916 ntTSL 3 BASIC6.22□□□□□ -1.41
SSX4O60224 OR10R2-201ENST00000368152 1008 ntAPPRIS P2 BASIC6.22□□□□□ -1.41
SSX4O60224 TRBV19-201ENST00000390393 552 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
SSX4O60224 FAUP2-201ENST00000394301 401 ntBASIC6.22□□□□□ -1.41
SSX4O60224 AC240504.1-201ENST00000395709 845 ntBASIC6.22□□□□□ -1.41
SSX4O60224 OR2H1-204ENST00000396792 1294 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
SSX4O60224 AL353626.3-201ENST00000413399 657 ntBASIC6.22□□□□□ -1.41
SSX4O60224 AP006748.1-201ENST00000418874 346 ntTSL 3 BASIC6.22□□□□□ -1.41
SSX4O60224 AC009495.3-201ENST00000425688 779 ntTSL 3 BASIC6.22□□□□□ -1.41
SSX4O60224 AL158212.1-201ENST00000428766 315 ntTSL 5 BASIC6.22□□□□□ -1.41
SSX4O60224 AL604028.2-201ENST00000437848 788 ntBASIC6.22□□□□□ -1.41
SSX4O60224 AL161626.1-201ENST00000441480 490 ntBASIC6.22□□□□□ -1.41
SSX4O60224 DBIL5P2-201ENST00000443827 253 ntBASIC6.22□□□□□ -1.41
SSX4O60224 PPIAP32-201ENST00000449940 472 ntBASIC6.22□□□□□ -1.41
SSX4O60224 LINC01431-203ENST00000452395 505 ntTSL 2 BASIC6.22□□□□□ -1.41
SSX4O60224 AC006026.3-201ENST00000454029 143 ntTSL 3 BASIC6.22□□□□□ -1.41
SSX4O60224 OR7L1P-201ENST00000456181 380 ntBASIC6.22□□□□□ -1.41
SSX4O60224 RN7SL251P-201ENST00000464175 297 ntBASIC6.22□□□□□ -1.41
SSX4O60224 PGAP2-210ENST00000464441 699 ntTSL 5 BASIC6.22□□□□□ -1.41
SSX4O60224 RN7SL160P-201ENST00000468558 284 ntBASIC6.22□□□□□ -1.41
SSX4O60224 AC009269.1-201ENST00000470368 833 ntTSL 3 BASIC6.22□□□□□ -1.41
SSX4O60224 RPS14P8-201ENST00000478778 369 ntBASIC6.22□□□□□ -1.41
SSX4O60224 AC098799.1-201ENST00000504752 800 ntBASIC6.22□□□□□ -1.41
SSX4O60224 OR7E163P-201ENST00000505943 894 ntBASIC6.22□□□□□ -1.41
SSX4O60224 NACAP6-201ENST00000509572 622 ntBASIC6.22□□□□□ -1.41
SSX4O60224 AC010451.2-201ENST00000511514 545 ntTSL 4 BASIC6.22□□□□□ -1.41
SSX4O60224 SCARNA11.1-201ENST00000516918 132 ntBASIC6.22□□□□□ -1.41
SSX4O60224 AC107952.1-201ENST00000524200 376 ntBASIC6.22□□□□□ -1.41
SSX4O60224 LINC01559-203ENST00000531049 683 ntTSL 3 BASIC6.22□□□□□ -1.41
SSX4O60224 AC044839.3-201ENST00000532068 860 ntTSL 3 BASIC6.22□□□□□ -1.41
SSX4O60224 RPL27A-211ENST00000532359 406 ntTSL 2 BASIC6.22□□□□□ -1.41
SSX4O60224 AC079089.1-203ENST00000533300 431 ntTSL 5 BASIC6.22□□□□□ -1.41
SSX4O60224 PRR13-204ENST00000547368 688 ntAPPRIS ALT2 TSL 3 BASIC6.22□□□□□ -1.41
SSX4O60224 BMS1P15-201ENST00000554269 1141 ntBASIC6.22□□□□□ -1.41
SSX4O60224 C15orf41-204ENST00000562877 764 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
SSX4O60224 AC105020.2-201ENST00000564683 572 ntTSL 5 BASIC6.22□□□□□ -1.41
SSX4O60224 AC005899.3-201ENST00000580360 271 ntTSL 3 BASIC6.22□□□□□ -1.41
SSX4O60224 AC130324.2-201ENST00000580873 638 ntTSL 2 BASIC6.22□□□□□ -1.41
SSX4O60224 LAMTOR5-AS1-207ENST00000590826 574 ntTSL 4 BASIC6.22□□□□□ -1.41
SSX4O60224 AC011468.2-202ENST00000594362 579 ntTSL 5 BASIC6.22□□□□□ -1.41
SSX4O60224 AC010618.2-201ENST00000596192 460 ntTSL 3 BASIC6.22□□□□□ -1.41
SSX4O60224 AC005479.3-201ENST00000602790 431 ntBASIC6.22□□□□□ -1.41
SSX4O60224 LINC02112-203ENST00000606169 419 ntTSL 5 BASIC6.22□□□□□ -1.41
SSX4O60224 AC005899.6-201ENST00000620729 297 ntBASIC6.22□□□□□ -1.41
SSX4O60224 MIR6813-201ENST00000621638 56 ntBASIC6.22□□□□□ -1.41
SSX4O60224 AC018659.2-201ENST00000624690 715 ntBASIC6.22□□□□□ -1.41
SSX4O60224 NPLOC4-221ENST00000625705 405 ntTSL 5 BASIC6.22□□□□□ -1.41
SSX4O60224 LINC01232-205ENST00000630421 1002 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
SSX4O60224 AL590396.3-201ENST00000636334 300 ntBASIC6.22□□□□□ -1.41
SSX4O60224 AC008147.2-201ENST00000552061 4713 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
SSX4O60224 ARHGAP28-201ENST00000262227 5369 ntAPPRIS ALT2 TSL 1 (best) BASIC6.22□□□□□ -1.41
SSX4O60224 SLC9A6-212ENST00000637195 4858 ntTSL 5 BASIC6.22□□□□□ -1.41
SSX4O60224 NLRP4-203ENST00000587891 3201 ntTSL 2 BASIC6.22□□□□□ -1.41
SSX4O60224 CDY1-201ENST00000306609 2321 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
SSX4O60224 CDY1B-201ENST00000306882 2321 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
SSX4O60224 LSM8-204ENST00000424702 4030 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
SSX4O60224 TCF4-278ENST00000636400 8343 ntTSL 5 BASIC6.22□□□□□ -1.41
SSX4O60224 ZNF184-202ENST00000377419 2899 ntAPPRIS P1 TSL 4 BASIC6.22□□□□□ -1.41
SSX4O60224 DICER1-202ENST00000393063 10220 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
SSX4O60224 AC104837.1-201ENST00000444644 1587 ntBASIC6.22□□□□□ -1.41
SSX4O60224 HTR2A-202ENST00000542664 5429 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
SSX4O60224 LINC01677-204ENST00000635342 1329 ntTSL 5 BASIC6.22□□□□□ -1.41
SSX4O60224 GRIK2-205ENST00000369138 4921 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
SSX4O60224 IAPP-205ENST00000542023 2015 ntTSL 2 BASIC6.21□□□□□ -1.41
SSX4O60224 OLFM3-201ENST00000338858 2189 ntAPPRIS ALT1 TSL 1 (best) BASIC6.21□□□□□ -1.41
SSX4O60224 BTG4-203ENST00000525791 1394 ntTSL 1 (best) BASIC6.21□□□□□ -1.41
SSX4O60224 CASP10-202ENST00000286186 5928 ntAPPRIS P4 TSL 1 (best) BASIC6.21□□□□□ -1.41
SSX4O60224 CSDE1-205ENST00000438362 4167 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
SSX4O60224 LINC01013-201ENST00000422700 1831 ntTSL 5 BASIC6.21□□□□□ -1.42
SSX4O60224 TMCC1P1-201ENST00000518897 1980 ntBASIC6.21□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 75.8 ms