Protein–RNA interactions for Protein: Q99909

SSX3, Protein SSX3, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3Q99909 AC073900.1-201ENST00000429766 776 ntBASIC5.88□□□□□ -1.47
SSX3Q99909 GAPDHP75-201ENST00000433910 943 ntBASIC5.88□□□□□ -1.47
SSX3Q99909 AL731892.1-201ENST00000437364 1192 ntBASIC5.88□□□□□ -1.47
SSX3Q99909 AC079781.1-201ENST00000441505 394 ntBASIC5.88□□□□□ -1.47
SSX3Q99909 RPL36AP55-201ENST00000454114 305 ntBASIC5.88□□□□□ -1.47
SSX3Q99909 RN7SL834P-201ENST00000461450 286 ntBASIC5.88□□□□□ -1.47
SSX3Q99909 SSR1-206ENST00000479365 1118 ntTSL 5 BASIC5.88□□□□□ -1.47
SSX3Q99909 DPH5-211ENST00000488176 1034 ntAPPRIS P4 TSL 3 BASIC5.88□□□□□ -1.47
SSX3Q99909 RN7SL776P-201ENST00000493390 268 ntBASIC5.88□□□□□ -1.47
SSX3Q99909 ABHD10-204ENST00000494817 801 ntTSL 3 BASIC5.88□□□□□ -1.47
SSX3Q99909 AC105420.1-201ENST00000504389 582 ntBASIC5.88□□□□□ -1.47
SSX3Q99909 LINC01603-202ENST00000519557 712 ntTSL 3 BASIC5.88□□□□□ -1.47
SSX3Q99909 NDUFA3P2-201ENST00000531434 232 ntBASIC5.88□□□□□ -1.47
SSX3Q99909 AL355102.4-201ENST00000553638 738 ntTSL 2 BASIC5.88□□□□□ -1.47
SSX3Q99909 AC023908.2-201ENST00000558616 318 ntTSL 3 BASIC5.88□□□□□ -1.47
SSX3Q99909 AC007611.1-202ENST00000564212 854 ntTSL 3 BASIC5.88□□□□□ -1.47
SSX3Q99909 AC090518.1-202ENST00000568246 578 ntTSL 4 BASIC5.88□□□□□ -1.47
SSX3Q99909 DLGAP1-AS3-201ENST00000577649 1258 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
SSX3Q99909 YTHDC1-207ENST00000579690 2983 ntAPPRIS ALT2 TSL 5 BASIC5.88□□□□□ -1.47
SSX3Q99909 AC090403.1-202ENST00000582108 833 ntTSL 3 BASIC5.88□□□□□ -1.47
SSX3Q99909 AC018521.2-202ENST00000582142 473 ntTSL 2 BASIC5.88□□□□□ -1.47
SSX3Q99909 MIR3159-201ENST00000584572 74 ntBASIC5.88□□□□□ -1.47
SSX3Q99909 ZNF397-211ENST00000592264 1104 ntTSL 3 BASIC5.88□□□□□ -1.47
SSX3Q99909 ZNF525-206ENST00000593918 590 ntTSL 5 BASIC5.88□□□□□ -1.47
SSX3Q99909 ZNF677-211ENST00000601828 719 ntTSL 2 BASIC5.88□□□□□ -1.47
SSX3Q99909 AL023806.2-201ENST00000603042 263 ntBASIC5.88□□□□□ -1.47
SSX3Q99909 COX6CP16-201ENST00000603667 216 ntBASIC5.88□□□□□ -1.47
SSX3Q99909 AC009237.12-201ENST00000604755 742 ntBASIC5.88□□□□□ -1.47
SSX3Q99909 STARD13-AS-240ENST00000609608 865 ntTSL 5 BASIC5.88□□□□□ -1.47
SSX3Q99909 AC015574.1-205ENST00000611285 524 ntTSL 5 BASIC5.88□□□□□ -1.47
SSX3Q99909 DNAJC10-209ENST00000613960 1010 ntTSL 5 BASIC5.88□□□□□ -1.47
SSX3Q99909 AC078909.2-201ENST00000620584 398 ntBASIC5.88□□□□□ -1.47
SSX3Q99909 AL121985.2-201ENST00000621192 555 ntBASIC5.88□□□□□ -1.47
SSX3Q99909 AC027506.1-201ENST00000621395 198 ntBASIC5.88□□□□□ -1.47
SSX3Q99909 AC087821.1-201ENST00000623639 567 ntBASIC5.88□□□□□ -1.47
SSX3Q99909 NPLOC4-221ENST00000625705 405 ntTSL 5 BASIC5.88□□□□□ -1.47
SSX3Q99909 LINC01173-201ENST00000629370 331 ntTSL 3 BASIC5.88□□□□□ -1.47
SSX3Q99909 ASB8-218ENST00000629941 278 ntTSL 5 BASIC5.88□□□□□ -1.47
SSX3Q99909 AC087565.2-201ENST00000637695 952 ntTSL 5 BASIC5.88□□□□□ -1.47
SSX3Q99909 ZNF93-209ENST00000638737 1020 ntTSL 5 BASIC5.88□□□□□ -1.47
SSX3Q99909 C16orf62-202ENST00000417362 3115 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
SSX3Q99909 ZNF761-202ENST00000432094 4061 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
SSX3Q99909 TMEM257-201ENST00000408967 2441 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
SSX3Q99909 ZCCHC6-206ENST00000375963 5379 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
SSX3Q99909 SERPINA11-201ENST00000334708 1476 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
SSX3Q99909 DPYD-202ENST00000370192 4412 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
SSX3Q99909 ARHGEF12-213ENST00000532993 8753 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
SSX3Q99909 SYTL4-203ENST00000372981 4847 ntTSL 2 BASIC5.88□□□□□ -1.47
SSX3Q99909 PIGN-217ENST00000591238 1622 ntTSL 5 BASIC5.88□□□□□ -1.47
SSX3Q99909 AL359263.1-201ENST00000441188 2796 ntBASIC5.88□□□□□ -1.47
SSX3Q99909 ERVH48-1-201ENST00000447535 2790 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
SSX3Q99909 AC004988.1-201ENST00000415237 1771 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
SSX3Q99909 VNN3-207ENST00000425515 1761 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
SSX3Q99909 RRS1-AS1-201ENST00000499642 4366 ntTSL 2 BASIC5.88□□□□□ -1.47
SSX3Q99909 INTS4-209ENST00000534064 3156 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
SSX3Q99909 RBMS2-201ENST00000262031 8382 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
SSX3Q99909 RMDN2-201ENST00000234195 1985 ntTSL 2 BASIC5.87□□□□□ -1.47
SSX3Q99909 NCOA4-206ENST00000585056 2124 ntTSL 2 BASIC5.87□□□□□ -1.47
SSX3Q99909 AC015871.3-201ENST00000618835 2261 ntBASIC5.87□□□□□ -1.47
SSX3Q99909 USP37-203ENST00000415516 4516 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
SSX3Q99909 FRAS1-207ENST00000512123 15624 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
SSX3Q99909 CEP41-213ENST00000489512 3161 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
SSX3Q99909 OAS2-201ENST00000342315 3613 ntAPPRIS P3 TSL 1 (best) BASIC5.87□□□□□ -1.47
SSX3Q99909 TCF7L2-222ENST00000627217 3680 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
SSX3Q99909 MAPK10-344ENST00000641718 3746 ntBASIC5.87□□□□□ -1.47
SSX3Q99909 AKR1C2-201ENST00000380753 3756 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
SSX3Q99909 FAM205C-201ENST00000340783 983 ntAPPRIS ALT2 TSL 4 BASIC5.87□□□□□ -1.47
SSX3Q99909 HYPM-201ENST00000341016 501 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
SSX3Q99909 RNU4-81P-201ENST00000363561 144 ntBASIC5.87□□□□□ -1.47
SSX3Q99909 RNA5SP442-201ENST00000365050 107 ntBASIC5.87□□□□□ -1.47
SSX3Q99909 NUDT5-202ENST00000378937 919 ntTSL 3 BASIC5.87□□□□□ -1.47
SSX3Q99909 RPS3AP5-201ENST00000389400 821 ntBASIC5.87□□□□□ -1.47
SSX3Q99909 TRAV38-1-201ENST00000390464 353 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
SSX3Q99909 AL589994.1-201ENST00000404962 340 ntBASIC5.87□□□□□ -1.47
SSX3Q99909 AL359633.1-201ENST00000421403 310 ntBASIC5.87□□□□□ -1.47
SSX3Q99909 MTND1P10-201ENST00000426108 832 ntBASIC5.87□□□□□ -1.47
SSX3Q99909 HNRNPA1P57-201ENST00000431359 530 ntTSL 4 BASIC5.87□□□□□ -1.47
SSX3Q99909 PHB2P1-201ENST00000434943 890 ntBASIC5.87□□□□□ -1.47
SSX3Q99909 RPS19P6-201ENST00000441327 433 ntBASIC5.87□□□□□ -1.47
SSX3Q99909 AL161626.1-201ENST00000441480 490 ntBASIC5.87□□□□□ -1.47
SSX3Q99909 LINC01013-203ENST00000443303 569 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
SSX3Q99909 DLG5-AS1-201ENST00000449852 487 ntTSL 2 BASIC5.87□□□□□ -1.47
SSX3Q99909 AL359839.1-201ENST00000451975 1160 ntBASIC5.87□□□□□ -1.47
SSX3Q99909 LINC00533-201ENST00000456103 537 ntTSL 3 BASIC5.87□□□□□ -1.47
SSX3Q99909 VN1R6P-201ENST00000458417 907 ntBASIC5.87□□□□□ -1.47
SSX3Q99909 AC104849.1-201ENST00000462623 405 ntBASIC5.87□□□□□ -1.47
SSX3Q99909 RN7SL456P-201ENST00000469290 295 ntBASIC5.87□□□□□ -1.47
SSX3Q99909 AC068522.1-201ENST00000482895 345 ntBASIC5.87□□□□□ -1.47
SSX3Q99909 AF305872.1-201ENST00000485217 471 ntBASIC5.87□□□□□ -1.47
SSX3Q99909 PABPC1P1-201ENST00000506347 591 ntBASIC5.87□□□□□ -1.47
SSX3Q99909 AC008417.1-201ENST00000510014 565 ntBASIC5.87□□□□□ -1.47
SSX3Q99909 RNU2-45P-201ENST00000516068 187 ntBASIC5.87□□□□□ -1.47
SSX3Q99909 AC113423.2-201ENST00000517582 545 ntTSL 2 BASIC5.87□□□□□ -1.47
SSX3Q99909 SLC25A51P2-201ENST00000535708 889 ntBASIC5.87□□□□□ -1.47
SSX3Q99909 LINC02384-207ENST00000542875 551 ntTSL 4 BASIC5.87□□□□□ -1.47
SSX3Q99909 AP000619.2-201ENST00000546014 969 ntBASIC5.87□□□□□ -1.47
SSX3Q99909 MTND2P17-201ENST00000550281 688 ntBASIC5.87□□□□□ -1.47
SSX3Q99909 AC126177.6-201ENST00000550420 1009 ntBASIC5.87□□□□□ -1.47
SSX3Q99909 AC023080.1-201ENST00000551663 931 ntBASIC5.87□□□□□ -1.47
SSX3Q99909 DAAM1-208ENST00000556135 582 ntTSL 3 BASIC5.87□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 78.2 ms