Protein–RNA interactions for Protein: P84243

H3F3A, Histone H3.3, humanhuman

Predictions only

Length 136 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3AP84243 TMED2-203ENST00000509052 1975 ntTSL 2 BASIC6.06□□□□□ -1.44
H3F3AP84243 AC092701.1-201ENST00000623627 1551 ntBASIC6.06□□□□□ -1.44
H3F3AP84243 NAV3-201ENST00000397909 9821 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
H3F3AP84243 BROX-201ENST00000340934 4124 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
H3F3AP84243 RNGTT-203ENST00000538899 1374 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
H3F3AP84243 CACNA1E-210ENST00000621791 16171 ntAPPRIS ALT2 TSL 1 (best) BASIC6.05□□□□□ -1.44
H3F3AP84243 LRP2BP-202ENST00000505916 2302 ntAPPRIS P1 TSL 2 BASIC6.05□□□□□ -1.44
H3F3AP84243 SCN2A-209ENST00000636071 8881 ntAPPRIS ALT1 TSL 5 BASIC6.05□□□□□ -1.44
H3F3AP84243 SCN2A-214ENST00000636985 8856 ntTSL 5 BASIC6.05□□□□□ -1.44
H3F3AP84243 AC083806.2-201ENST00000617795 2685 ntBASIC6.05□□□□□ -1.44
H3F3AP84243 MTPAP-201ENST00000263063 5601 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
H3F3AP84243 TMED10-201ENST00000303575 4127 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
H3F3AP84243 ANKRD46-201ENST00000335659 2649 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
H3F3AP84243 BPIFC-204ENST00000534972 1809 ntTSL 5 BASIC6.05□□□□□ -1.44
H3F3AP84243 GRIK2-205ENST00000369138 4921 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
H3F3AP84243 RERGL-201ENST00000229002 1147 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
H3F3AP84243 SULT1C3-201ENST00000329106 915 ntAPPRIS P1 TSL 2 BASIC6.05□□□□□ -1.44
H3F3AP84243 SEC61G-201ENST00000352861 462 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
H3F3AP84243 RNA5SP65-201ENST00000363166 119 ntBASIC6.05□□□□□ -1.44
H3F3AP84243 RN7SKP191-201ENST00000364713 306 ntBASIC6.05□□□□□ -1.44
H3F3AP84243 NOX4-203ENST00000375979 816 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
H3F3AP84243 UBBP1-201ENST00000392399 473 ntBASIC6.05□□□□□ -1.44
H3F3AP84243 AL121759.1-202ENST00000425746 387 ntTSL 3 BASIC6.05□□□□□ -1.44
H3F3AP84243 RPL3P11-201ENST00000434028 1146 ntBASIC6.05□□□□□ -1.44
H3F3AP84243 DSCAM-IT1-201ENST00000440363 720 ntTSL 3 BASIC6.05□□□□□ -1.44
H3F3AP84243 LINC00349-201ENST00000448748 841 ntTSL 5 BASIC6.05□□□□□ -1.44
H3F3AP84243 VNN3-210ENST00000450865 596 ntTSL 4 BASIC6.05□□□□□ -1.44
H3F3AP84243 DIRC3-AS1-201ENST00000452813 557 ntTSL 3 BASIC6.05□□□□□ -1.44
H3F3AP84243 BBOF1-202ENST00000463558 550 ntAPPRIS ALT2 TSL 2 BASIC6.05□□□□□ -1.44
H3F3AP84243 RN7SL216P-201ENST00000471607 298 ntBASIC6.05□□□□□ -1.44
H3F3AP84243 AC012158.1-202ENST00000482431 1132 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
H3F3AP84243 AC016642.1-202ENST00000509476 641 ntTSL 3 BASIC6.05□□□□□ -1.44
H3F3AP84243 AC094105.1-201ENST00000509745 560 ntTSL 4 BASIC6.05□□□□□ -1.44
H3F3AP84243 AC026785.3-201ENST00000511182 285 ntTSL 2 BASIC6.05□□□□□ -1.44
H3F3AP84243 AC137549.1-201ENST00000514243 533 ntBASIC6.05□□□□□ -1.44
H3F3AP84243 AC093878.1-201ENST00000515630 432 ntBASIC6.05□□□□□ -1.44
H3F3AP84243 SCARNA11.1-201ENST00000516918 132 ntBASIC6.05□□□□□ -1.44
H3F3AP84243 AP000426.1-201ENST00000518749 361 ntTSL 3 BASIC6.05□□□□□ -1.44
H3F3AP84243 AC087273.2-201ENST00000519038 634 ntTSL 3 BASIC6.05□□□□□ -1.44
H3F3AP84243 AC023866.2-201ENST00000521378 387 ntTSL 3 BASIC6.05□□□□□ -1.44
H3F3AP84243 AC091096.2-201ENST00000523284 587 ntTSL 3 BASIC6.05□□□□□ -1.44
H3F3AP84243 SOX9-AS1-208ENST00000529667 340 ntTSL 3 BASIC6.05□□□□□ -1.44
H3F3AP84243 AP001107.4-201ENST00000533576 539 ntTSL 3 BASIC6.05□□□□□ -1.44
H3F3AP84243 ELK3-206ENST00000552142 1242 ntTSL 5 BASIC6.05□□□□□ -1.44
H3F3AP84243 FLVCR2-204ENST00000553587 584 ntTSL 2 BASIC6.05□□□□□ -1.44
H3F3AP84243 AC009269.5-201ENST00000557800 755 ntTSL 3 BASIC6.05□□□□□ -1.44
H3F3AP84243 AC020892.1-201ENST00000559918 855 ntTSL 2 BASIC6.05□□□□□ -1.44
H3F3AP84243 AC126323.5-201ENST00000569913 592 ntTSL 3 BASIC6.05□□□□□ -1.44
H3F3AP84243 DIMT1P1-201ENST00000603970 763 ntBASIC6.05□□□□□ -1.44
H3F3AP84243 MIR6070-201ENST00000613967 103 ntBASIC6.05□□□□□ -1.44
H3F3AP84243 AC092683.1-202ENST00000620023 754 ntTSL 3 BASIC6.05□□□□□ -1.44
H3F3AP84243 AC159540.2-201ENST00000621110 754 ntTSL 3 BASIC6.05□□□□□ -1.44
H3F3AP84243 OR4X2-201ENST00000624868 1025 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
H3F3AP84243 CTNNA2-202ENST00000361291 3071 ntTSL 5 BASIC6.05□□□□□ -1.44
H3F3AP84243 C2CD6-203ENST00000439802 1639 ntAPPRIS ALT2 TSL 2 BASIC6.05□□□□□ -1.44
H3F3AP84243 DCSTAMP-201ENST00000297581 1953 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
H3F3AP84243 LRRFIP2-201ENST00000336686 3208 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
H3F3AP84243 SLC26A7-202ENST00000309536 2656 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
H3F3AP84243 VDAC2-214ENST00000543351 1424 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
H3F3AP84243 PRDX6-201ENST00000340385 1751 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
H3F3AP84243 AC009220.2-201ENST00000489759 1751 ntBASIC6.05□□□□□ -1.44
H3F3AP84243 LRFN5-203ENST00000554120 2121 ntAPPRIS ALT2 TSL 5 BASIC6.05□□□□□ -1.44
H3F3AP84243 SYTL2-220ENST00000529581 1910 ntTSL 2 BASIC6.05□□□□□ -1.44
H3F3AP84243 AC087477.2-202ENST00000558499 4856 ntTSL 4 BASIC6.05□□□□□ -1.44
H3F3AP84243 PRND-201ENST00000305817 3980 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
H3F3AP84243 AC007255.1-201ENST00000450540 1376 ntTSL 3 BASIC6.05□□□□□ -1.44
H3F3AP84243 ZNF91-202ENST00000397082 3572 ntAPPRIS ALT2 TSL 2 BASIC6.05□□□□□ -1.44
H3F3AP84243 FAT4-202ENST00000394329 16123 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
H3F3AP84243 CYP4A22-206ENST00000619754 2351 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
H3F3AP84243 ZNF763-202ENST00000358987 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
H3F3AP84243 AF064860.2-201ENST00000457325 1542 ntTSL 3 BASIC6.04□□□□□ -1.44
H3F3AP84243 RAB9B-201ENST00000243298 3748 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
H3F3AP84243 SLF2-202ENST00000370269 3712 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
H3F3AP84243 MEF2C-249ENST00000637481 6088 ntTSL 5 BASIC6.04□□□□□ -1.44
H3F3AP84243 AC099062.1-202ENST00000640362 3864 ntTSL 5 BASIC6.04□□□□□ -1.44
H3F3AP84243 IL5RA-209ENST00000446632 2514 ntAPPRIS P4 TSL 5 BASIC6.04□□□□□ -1.44
H3F3AP84243 KCNJ15-201ENST00000328656 8399 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
H3F3AP84243 METTL21EP-202ENST00000605100 2312 ntTSL 2 BASIC6.04□□□□□ -1.44
H3F3AP84243 NEK2P4-201ENST00000425793 1329 ntBASIC6.04□□□□□ -1.44
H3F3AP84243 AL512310.3-201ENST00000547023 1335 ntBASIC6.04□□□□□ -1.44
H3F3AP84243 CALB1-208ENST00000518457 1490 ntTSL 2 BASIC6.04□□□□□ -1.44
H3F3AP84243 NRCAM-202ENST00000379022 3900 ntTSL 5 BASIC6.04□□□□□ -1.44
H3F3AP84243 CLCA3P-203ENST00000490028 2781 ntBASIC6.04□□□□□ -1.44
H3F3AP84243 AC007359.1-202ENST00000419158 2939 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
H3F3AP84243 ZHX3-205ENST00000432768 3551 ntAPPRIS P1 TSL 2 BASIC6.04□□□□□ -1.44
H3F3AP84243 AC008175.1-201ENST00000446299 2939 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
H3F3AP84243 LARS-212ENST00000510191 3737 ntTSL 2 BASIC6.04□□□□□ -1.44
H3F3AP84243 PLCH1-206ENST00000494598 3525 ntTSL 5 BASIC6.04□□□□□ -1.44
H3F3AP84243 OR56B1-201ENST00000317121 2075 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
H3F3AP84243 LALBA-201ENST00000301046 728 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
H3F3AP84243 RNA5SP382-201ENST00000363355 112 ntBASIC6.04□□□□□ -1.44
H3F3AP84243 RNU1-55P-201ENST00000365510 158 ntBASIC6.04□□□□□ -1.44
H3F3AP84243 CD200R1L-201ENST00000398214 1296 ntAPPRIS P3 TSL 1 (best) BASIC6.04□□□□□ -1.44
H3F3AP84243 AC010082.1-201ENST00000411797 546 ntTSL 2 BASIC6.04□□□□□ -1.44
H3F3AP84243 RPS21P8-201ENST00000413365 247 ntBASIC6.04□□□□□ -1.44
H3F3AP84243 BX284668.3-201ENST00000414128 882 ntTSL 5 BASIC6.04□□□□□ -1.44
H3F3AP84243 AHCYP8-201ENST00000425108 209 ntBASIC6.04□□□□□ -1.44
H3F3AP84243 E2F6P1-201ENST00000428850 745 ntBASIC6.04□□□□□ -1.44
H3F3AP84243 PAICSP2-201ENST00000429118 1150 ntBASIC6.04□□□□□ -1.44
H3F3AP84243 AC245452.2-201ENST00000435222 392 ntBASIC6.04□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 87.8 ms