Protein–RNA interactions for Protein: P29973

CNGA1, cGMP-gated cation channel alpha-1, humanhuman

Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1P29973 AC008967.1-201ENST00000504843 163 ntBASIC8.06□□□□□ -1.12
CNGA1P29973 IGLC4-201ENST00000517690 248 ntBASIC8.06□□□□□ -1.12
CNGA1P29973 AP005902.2-201ENST00000518393 307 ntBASIC8.06□□□□□ -1.12
CNGA1P29973 MTND1P36-201ENST00000522384 936 ntBASIC8.06□□□□□ -1.12
CNGA1P29973 AC107032.2-201ENST00000551082 386 ntTSL 3 BASIC8.06□□□□□ -1.12
CNGA1P29973 AC015853.3-201ENST00000570974 478 ntTSL 4 BASIC8.06□□□□□ -1.12
CNGA1P29973 AL512605.1-201ENST00000588215 1263 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
CNGA1P29973 RPS4XP21-201ENST00000603814 750 ntBASIC8.06□□□□□ -1.12
CNGA1P29973 FP325318.1-201ENST00000616097 1263 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
CNGA1P29973 RN7SL126P-201ENST00000616400 299 ntBASIC8.06□□□□□ -1.12
CNGA1P29973 HP1BP3-201ENST00000312239 3938 ntAPPRIS P1 TSL 2 BASIC8.06□□□□□ -1.12
CNGA1P29973 ZNF426-201ENST00000253115 7085 ntAPPRIS P3 TSL 1 (best) BASIC8.06□□□□□ -1.12
CNGA1P29973 GOLGA6L6-201ENST00000619213 4013 ntAPPRIS P1 TSL 5 BASIC8.06□□□□□ -1.12
CNGA1P29973 PJA2-201ENST00000361189 4889 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
CNGA1P29973 FZD3-204ENST00000537916 13740 ntAPPRIS P1 TSL 2 BASIC8.06□□□□□ -1.12
CNGA1P29973 DDX60-201ENST00000393743 6071 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
CNGA1P29973 NRCAM-204ENST00000379028 6685 ntAPPRIS ALT2 TSL 5 BASIC8.06□□□□□ -1.12
CNGA1P29973 EPPIN-202ENST00000354280 1987 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
CNGA1P29973 DRP2-204ENST00000538510 6852 ntAPPRIS P3 TSL 2 BASIC8.06□□□□□ -1.12
CNGA1P29973 PGAP1-201ENST00000354764 11114 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
CNGA1P29973 ERICH3-202ENST00000420661 2068 ntAPPRIS ALT2 TSL 1 (best) BASIC8.06□□□□□ -1.12
CNGA1P29973 LINC00310-204ENST00000430922 2086 ntTSL 2 BASIC8.06□□□□□ -1.12
CNGA1P29973 CHCHD7-203ENST00000396723 1550 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
CNGA1P29973 BLNK-203ENST00000413476 1599 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
CNGA1P29973 CD86-209ENST00000493101 1572 ntTSL 2 BASIC8.05□□□□□ -1.12
CNGA1P29973 ALG13-202ENST00000371979 2770 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
CNGA1P29973 CDH2-202ENST00000399380 3737 ntTSL 2 BASIC8.05□□□□□ -1.12
CNGA1P29973 ZNF812P-201ENST00000457674 1694 ntBASIC8.05□□□□□ -1.12
CNGA1P29973 RORA-203ENST00000335670 10844 ntAPPRIS P3 TSL 1 (best) BASIC8.05□□□□□ -1.12
CNGA1P29973 DYNC2LI1-203ENST00000398823 2903 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
CNGA1P29973 ZNF474-201ENST00000296600 1964 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
CNGA1P29973 PSORS1C1-201ENST00000259881 908 ntAPPRIS P2 TSL 1 (best) BASIC8.05□□□□□ -1.12
CNGA1P29973 BCL2A1-201ENST00000267953 1033 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
CNGA1P29973 MAPK14-203ENST00000310795 1066 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
CNGA1P29973 OR51L1-201ENST00000321543 948 ntAPPRIS P1 BASIC8.05□□□□□ -1.12
CNGA1P29973 RPL7A-202ENST00000323345 891 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
CNGA1P29973 LINC01620-202ENST00000372910 649 ntTSL 5 BASIC8.05□□□□□ -1.12
CNGA1P29973 RPL12P1-201ENST00000374520 498 ntBASIC8.05□□□□□ -1.12
CNGA1P29973 CASP10-206ENST00000374650 1126 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
CNGA1P29973 TRBV6-7-201ENST00000390373 344 ntAPPRIS P1 BASIC8.05□□□□□ -1.12
CNGA1P29973 AC009500.1-201ENST00000420684 583 ntBASIC8.05□□□□□ -1.12
CNGA1P29973 AC114752.2-201ENST00000424119 404 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
CNGA1P29973 HNRNPA1P30-201ENST00000424329 751 ntTSL 3 BASIC8.05□□□□□ -1.12
CNGA1P29973 AC000089.1-201ENST00000424559 801 ntBASIC8.05□□□□□ -1.12
CNGA1P29973 AL445623.1-201ENST00000440888 237 ntTSL 3 BASIC8.05□□□□□ -1.12
CNGA1P29973 AC245291.3-201ENST00000443400 292 ntBASIC8.05□□□□□ -1.12
CNGA1P29973 LINC01851-201ENST00000443419 637 ntTSL 3 BASIC8.05□□□□□ -1.12
CNGA1P29973 LINC01638-202ENST00000444114 637 ntTSL 2 BASIC8.05□□□□□ -1.12
CNGA1P29973 LINC00867-203ENST00000445161 580 ntTSL 2 BASIC8.05□□□□□ -1.12
CNGA1P29973 RPL5P10-201ENST00000445207 894 ntBASIC8.05□□□□□ -1.12
CNGA1P29973 ATP5J2-205ENST00000449683 460 ntTSL 3 BASIC8.05□□□□□ -1.12
CNGA1P29973 AC234771.3-201ENST00000454984 622 ntBASIC8.05□□□□□ -1.12
CNGA1P29973 RPS7P10-201ENST00000464254 603 ntBASIC8.05□□□□□ -1.12
CNGA1P29973 AC239584.1-201ENST00000510419 732 ntTSL 5 BASIC8.05□□□□□ -1.12
CNGA1P29973 Vault.2-201ENST00000516519 98 ntBASIC8.05□□□□□ -1.12
CNGA1P29973 RN7SKP70-201ENST00000516655 271 ntBASIC8.05□□□□□ -1.12
CNGA1P29973 KCNU1-202ENST00000518904 334 ntTSL 2 BASIC8.05□□□□□ -1.12
CNGA1P29973 AC245519.1-201ENST00000522799 512 ntTSL 4 BASIC8.05□□□□□ -1.12
CNGA1P29973 AC108136.1-201ENST00000530350 631 ntTSL 5 BASIC8.05□□□□□ -1.12
CNGA1P29973 LINC02310-201ENST00000556762 572 ntTSL 4 BASIC8.05□□□□□ -1.12
CNGA1P29973 AC026458.1-201ENST00000564330 438 ntBASIC8.05□□□□□ -1.12
CNGA1P29973 MIR4271-201ENST00000582451 67 ntBASIC8.05□□□□□ -1.12
CNGA1P29973 AC022916.2-201ENST00000590144 559 ntTSL 4 BASIC8.05□□□□□ -1.12
CNGA1P29973 ZNF137P-202ENST00000597158 308 ntTSL 3 BASIC8.05□□□□□ -1.12
CNGA1P29973 AC068802.1-201ENST00000603420 732 ntBASIC8.05□□□□□ -1.12
CNGA1P29973 AL359094.1-211ENST00000608350 335 ntTSL 5 BASIC8.05□□□□□ -1.12
CNGA1P29973 OR7M1P-201ENST00000608946 533 ntBASIC8.05□□□□□ -1.12
CNGA1P29973 EAPP-205ENST00000618169 1237 ntTSL 5 BASIC8.05□□□□□ -1.12
CNGA1P29973 AC073857.1-201ENST00000625082 1054 ntBASIC8.05□□□□□ -1.12
CNGA1P29973 ADA2-201ENST00000262607 3925 ntAPPRIS P3 TSL 1 (best) BASIC8.05□□□□□ -1.12
CNGA1P29973 MTIF2-201ENST00000263629 2528 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
CNGA1P29973 KIAA0040-202ENST00000444639 4494 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
CNGA1P29973 FAM122C-201ENST00000370784 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC8.05□□□□□ -1.12
CNGA1P29973 VEPH1-201ENST00000362010 4202 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
CNGA1P29973 ZNF793-207ENST00000587986 3869 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
CNGA1P29973 TSHZ2-201ENST00000329613 3093 ntTSL 4 BASIC8.05□□□□□ -1.12
CNGA1P29973 IARS-205ENST00000443024 4341 ntTSL 5 BASIC8.05□□□□□ -1.12
CNGA1P29973 ZNF770-201ENST00000356321 5439 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
CNGA1P29973 EHBP1-203ENST00000405289 3591 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
CNGA1P29973 ENTPD1-205ENST00000453258 5044 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
CNGA1P29973 SLC4A4-204ENST00000425175 7596 ntTSL 5 BASIC8.05□□□□□ -1.12
CNGA1P29973 GON4L-204ENST00000437809 7713 ntAPPRIS P3 TSL 5 BASIC8.04□□□□□ -1.12
CNGA1P29973 OSBPL1A-202ENST00000357041 1869 ntTSL 2 BASIC8.04□□□□□ -1.12
CNGA1P29973 OTX2-AS1-201ENST00000534909 2428 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
CNGA1P29973 AC097478.1-207ENST00000612706 2422 ntTSL 5 BASIC8.04□□□□□ -1.12
CNGA1P29973 UBE2V1-201ENST00000340309 2536 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
CNGA1P29973 RND3-201ENST00000263895 2711 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
CNGA1P29973 CAST-228ENST00000509903 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC8.04□□□□□ -1.12
CNGA1P29973 IL1RAP-201ENST00000072516 4697 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
CNGA1P29973 CFHR5-201ENST00000256785 2810 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
CNGA1P29973 TMEM138-209ENST00000542946 2839 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
CNGA1P29973 STARD4-AS1-201ENST00000500779 5525 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
CNGA1P29973 C8orf34-AS1-201ENST00000512294 1600 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
CNGA1P29973 AL359694.2-201ENST00000567753 1615 ntBASIC8.04□□□□□ -1.12
CNGA1P29973 SEC62-201ENST00000337002 6568 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
CNGA1P29973 NRK-201ENST00000243300 8062 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
CNGA1P29973 FBXW10-201ENST00000301938 3221 ntAPPRIS ALT2 TSL 1 (best) BASIC8.04□□□□□ -1.12
CNGA1P29973 SLC12A1-202ENST00000380993 4707 ntAPPRIS P3 TSL 5 BASIC8.04□□□□□ -1.12
CNGA1P29973 RBM46-201ENST00000281722 2583 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
CNGA1P29973 SH3D19-210ENST00000514152 5107 ntAPPRIS ALT1 TSL 2 BASIC8.04□□□□□ -1.12
Retrieved 100 of 98,524 protein–RNA pairs in 85.5 ms