Protein–RNA interactions for Protein: P20908

COL5A1, Collagen alpha-1(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,838 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1P20908 AC010978.1-202ENST00000427050 893 ntTSL 3 BASIC6.38□□□□□ -1.39
COL5A1P20908 AC133965.1-201ENST00000452984 354 ntBASIC6.38□□□□□ -1.39
COL5A1P20908 SSBP1-205ENST00000465582 731 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
COL5A1P20908 AC078788.1-201ENST00000498457 634 ntTSL 3 BASIC6.38□□□□□ -1.39
COL5A1P20908 AC010181.1-202ENST00000509191 798 ntTSL 3 BASIC6.38□□□□□ -1.39
COL5A1P20908 AC005699.1-204ENST00000509244 747 ntTSL 5 BASIC6.38□□□□□ -1.39
COL5A1P20908 AC105389.1-201ENST00000510602 561 ntTSL 4 BASIC6.38□□□□□ -1.39
COL5A1P20908 COX6B1P4-201ENST00000519826 484 ntBASIC6.38□□□□□ -1.39
COL5A1P20908 OR9L1P-201ENST00000529493 933 ntBASIC6.38□□□□□ -1.39
COL5A1P20908 NPIPB14P-203ENST00000532298 987 ntBASIC6.38□□□□□ -1.39
COL5A1P20908 AC016144.1-201ENST00000548175 1087 ntBASIC6.38□□□□□ -1.39
COL5A1P20908 AC022558.1-201ENST00000560450 454 ntTSL 3 BASIC6.38□□□□□ -1.39
COL5A1P20908 NR2F2-AS1-209ENST00000560800 549 ntTSL 4 BASIC6.38□□□□□ -1.39
COL5A1P20908 AC139099.3-202ENST00000574856 439 ntTSL 2 BASIC6.38□□□□□ -1.39
COL5A1P20908 AC008521.2-201ENST00000591021 259 ntBASIC6.38□□□□□ -1.39
COL5A1P20908 AP001264.1-201ENST00000620602 703 ntBASIC6.38□□□□□ -1.39
COL5A1P20908 AC074387.1-201ENST00000632044 823 ntTSL 2 BASIC6.38□□□□□ -1.39
COL5A1P20908 PPP2R5C-205ENST00000445439 1526 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
COL5A1P20908 AL590004.4-201ENST00000566733 7060 ntBASIC6.38□□□□□ -1.39
COL5A1P20908 GDPD4-202ENST00000376217 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC6.38□□□□□ -1.39
COL5A1P20908 AC008467.1-201ENST00000512693 5471 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
COL5A1P20908 CNTRL-212ENST00000613863 2418 ntTSL 5 BASIC6.38□□□□□ -1.39
COL5A1P20908 CTNNA2-218ENST00000541047 2870 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
COL5A1P20908 EBLN2-201ENST00000533473 1679 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
COL5A1P20908 ASAH1-267ENST00000637991 2399 ntTSL 5 BASIC6.38□□□□□ -1.39
COL5A1P20908 LEPR-203ENST00000371058 2805 ntTSL 5 BASIC6.38□□□□□ -1.39
COL5A1P20908 ZNF716-201ENST00000420713 5197 ntAPPRIS P1 TSL 4 BASIC6.38□□□□□ -1.39
COL5A1P20908 AC107398.3-201ENST00000562284 7000 ntBASIC6.38□□□□□ -1.39
COL5A1P20908 L3MBTL3-209ENST00000533560 3165 ntAPPRIS ALT2 TSL 1 (best) BASIC6.37□□□□□ -1.39
COL5A1P20908 C1QTNF7-201ENST00000295297 4516 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
COL5A1P20908 ENPP5-202ENST00000371383 3834 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
COL5A1P20908 DGKK-201ENST00000611977 7407 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
COL5A1P20908 CELF2-209ENST00000631460 5538 ntTSL 5 BASIC6.37□□□□□ -1.39
COL5A1P20908 ZMYND11-209ENST00000402736 3950 ntTSL 5 BASIC6.37□□□□□ -1.39
COL5A1P20908 TMC5-208ENST00000564959 2434 ntTSL 2 BASIC6.37□□□□□ -1.39
COL5A1P20908 AC124045.1-201ENST00000606008 1953 ntBASIC6.37□□□□□ -1.39
COL5A1P20908 CLEC12A-201ENST00000304361 1549 ntAPPRIS P4 TSL 1 (best) BASIC6.37□□□□□ -1.39
COL5A1P20908 RN7SKP23-201ENST00000625159 4301 ntBASIC6.37□□□□□ -1.39
COL5A1P20908 DUXAP8-203ENST00000437781 2398 ntTSL 2 BASIC6.37□□□□□ -1.39
COL5A1P20908 PDIK1L-202ENST00000374271 4279 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
COL5A1P20908 PAGE2-202ENST00000374968 551 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
COL5A1P20908 TRAV5-201ENST00000390427 352 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
COL5A1P20908 LYPLA1P3-201ENST00000402650 695 ntBASIC6.37□□□□□ -1.39
COL5A1P20908 SLC8A1-204ENST00000405269 2965 ntTSL 5 BASIC6.37□□□□□ -1.39
COL5A1P20908 AL663061.1-201ENST00000416625 580 ntBASIC6.37□□□□□ -1.39
COL5A1P20908 AC066692.1-201ENST00000421721 457 ntBASIC6.37□□□□□ -1.39
COL5A1P20908 AC096669.1-201ENST00000422203 648 ntTSL 5 BASIC6.37□□□□□ -1.39
COL5A1P20908 AL035701.1-202ENST00000437249 371 ntTSL 3 BASIC6.37□□□□□ -1.39
COL5A1P20908 CRYGGP-201ENST00000443337 145 ntBASIC6.37□□□□□ -1.39
COL5A1P20908 AC002486.2-201ENST00000447806 590 ntBASIC6.37□□□□□ -1.39
COL5A1P20908 PPIAP27-201ENST00000453800 265 ntBASIC6.37□□□□□ -1.39
COL5A1P20908 RN7SL369P-201ENST00000477138 299 ntBASIC6.37□□□□□ -1.39
COL5A1P20908 AP002453.1-201ENST00000492327 668 ntBASIC6.37□□□□□ -1.39
COL5A1P20908 LINC02059-201ENST00000503843 452 ntTSL 3 BASIC6.37□□□□□ -1.39
COL5A1P20908 OR7E99P-201ENST00000505750 922 ntBASIC6.37□□□□□ -1.39
COL5A1P20908 LECT2-203ENST00000512872 762 ntTSL 5 BASIC6.37□□□□□ -1.39
COL5A1P20908 AC106800.2-201ENST00000514009 1103 ntBASIC6.37□□□□□ -1.39
COL5A1P20908 AC090022.1-201ENST00000546569 311 ntBASIC6.37□□□□□ -1.39
COL5A1P20908 AC008055.1-201ENST00000547032 609 ntBASIC6.37□□□□□ -1.39
COL5A1P20908 AC009121.2-202ENST00000572706 505 ntTSL 3 BASIC6.37□□□□□ -1.39
COL5A1P20908 AC005899.5-201ENST00000584721 552 ntTSL 5 BASIC6.37□□□□□ -1.39
COL5A1P20908 RPSAP75-201ENST00000605848 301 ntBASIC6.37□□□□□ -1.39
COL5A1P20908 AC183089.2-201ENST00000637931 916 ntBASIC6.37□□□□□ -1.39
COL5A1P20908 OR7E25P-202ENST00000641088 5937 ntBASIC6.37□□□□□ -1.39
COL5A1P20908 AP000688.2-201ENST00000422473 2336 ntTSL 2 BASIC6.37□□□□□ -1.39
COL5A1P20908 RACGAP1P-201ENST00000550663 1879 ntBASIC6.37□□□□□ -1.39
COL5A1P20908 ZNF37A-202ENST00000361085 8738 ntAPPRIS P1 TSL 2 BASIC6.37□□□□□ -1.39
COL5A1P20908 CPM-201ENST00000338356 6636 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
COL5A1P20908 BMPR1B-201ENST00000264568 1807 ntAPPRIS P1 TSL 2 BASIC6.37□□□□□ -1.39
COL5A1P20908 SYNE1-206ENST00000367253 5189 ntTSL 5 BASIC6.37□□□□□ -1.39
COL5A1P20908 CDC7-201ENST00000234626 3173 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
COL5A1P20908 NPL-212ENST00000614468 2376 ntTSL 5 BASIC6.37□□□□□ -1.39
COL5A1P20908 AC087392.3-202ENST00000358446 1754 ntBASIC6.37□□□□□ -1.39
COL5A1P20908 TIAL1-203ENST00000369093 5072 ntTSL 2 BASIC6.37□□□□□ -1.39
COL5A1P20908 AFG1L-201ENST00000368977 5208 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
COL5A1P20908 ZNF23-204ENST00000428724 1932 ntAPPRIS P3 TSL 1 (best) BASIC6.37□□□□□ -1.39
COL5A1P20908 BMPR1A-201ENST00000372037 11255 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
COL5A1P20908 CHORDC1-201ENST00000320585 2654 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
COL5A1P20908 ZNF337-202ENST00000376436 3613 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
COL5A1P20908 MFSD8-217ENST00000641178 4374 ntBASIC6.37□□□□□ -1.39
COL5A1P20908 RUNX1T1-234ENST00000521553 1346 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
COL5A1P20908 MAPK10-298ENST00000641297 3040 ntAPPRIS P2 BASIC6.37□□□□□ -1.39
COL5A1P20908 ZNF770-201ENST00000356321 5439 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
COL5A1P20908 LPIN1-202ENST00000396097 5690 ntTSL 5 BASIC6.36□□□□□ -1.39
COL5A1P20908 SMR3B-201ENST00000304915 785 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
COL5A1P20908 TAF13-201ENST00000338366 813 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
COL5A1P20908 RN7SKP69-201ENST00000365390 305 ntBASIC6.36□□□□□ -1.39
COL5A1P20908 AC009518.1-202ENST00000415393 1229 ntTSL 2 BASIC6.36□□□□□ -1.39
COL5A1P20908 AL355339.1-202ENST00000417542 458 ntTSL 2 BASIC6.36□□□□□ -1.39
COL5A1P20908 CD33-203ENST00000421133 1023 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
COL5A1P20908 AL355339.1-201ENST00000434386 435 ntTSL 2 BASIC6.36□□□□□ -1.39
COL5A1P20908 AF127936.1-201ENST00000435315 695 ntTSL 3 BASIC6.36□□□□□ -1.39
COL5A1P20908 SMIM30-204ENST00000441359 962 ntAPPRIS P1 TSL 2 BASIC6.36□□□□□ -1.39
COL5A1P20908 AC114814.1-201ENST00000444926 691 ntTSL 3 BASIC6.36□□□□□ -1.39
COL5A1P20908 RPS26P39-201ENST00000469206 341 ntBASIC6.36□□□□□ -1.39
COL5A1P20908 LINC02270-202ENST00000515691 541 ntTSL 3 BASIC6.36□□□□□ -1.39
COL5A1P20908 IGHVIII-67-4-201ENST00000524281 296 ntBASIC6.36□□□□□ -1.39
COL5A1P20908 APAF1-211ENST00000552268 1143 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
COL5A1P20908 AC005632.2-201ENST00000564271 828 ntBASIC6.36□□□□□ -1.39
COL5A1P20908 AC023813.1-201ENST00000565055 306 ntTSL 5 BASIC6.36□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 87.5 ms