Protein–RNA interactions for Protein: Q9NWF9

RNF216, E3 ubiquitin-protein ligase RNF216, humanhuman

Predicted RBP Predictions only

Length 866 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF216Q9NWF9 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
RNF216Q9NWF9 AL513128.1-201ENST00000422675 469 ntTSL 5 BASIC22.64■■□□□ 1.21
RNF216Q9NWF9 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC22.64■■□□□ 1.21
RNF216Q9NWF9 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC22.64■■□□□ 1.21
RNF216Q9NWF9 MMAB-206ENST00000540016 945 ntTSL 3 BASIC22.64■■□□□ 1.21
RNF216Q9NWF9 AC020656.1-201ENST00000548900 599 ntTSL 3 BASIC22.64■■□□□ 1.21
RNF216Q9NWF9 AC025265.3-201ENST00000550175 468 ntTSL 3 BASIC22.64■■□□□ 1.21
RNF216Q9NWF9 DET1-205ENST00000558413 583 ntTSL 4 BASIC22.64■■□□□ 1.21
RNF216Q9NWF9 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC22.64■■□□□ 1.21
RNF216Q9NWF9 AL589743.5-201ENST00000616611 1050 ntBASIC22.64■■□□□ 1.21
RNF216Q9NWF9 LINC01521-201ENST00000504184 1943 ntBASIC22.64■■□□□ 1.21
RNF216Q9NWF9 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC22.64■■□□□ 1.21
RNF216Q9NWF9 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
RNF216Q9NWF9 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
RNF216Q9NWF9 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC22.64■■□□□ 1.21
RNF216Q9NWF9 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC22.63■■□□□ 1.21
RNF216Q9NWF9 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC22.63■■□□□ 1.21
RNF216Q9NWF9 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
RNF216Q9NWF9 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC22.63■■□□□ 1.21
RNF216Q9NWF9 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC22.63■■□□□ 1.21
RNF216Q9NWF9 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC22.63■■□□□ 1.21
RNF216Q9NWF9 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
RNF216Q9NWF9 LINC01006-201ENST00000333319 2292 ntBASIC22.63■■□□□ 1.21
RNF216Q9NWF9 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
RNF216Q9NWF9 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
RNF216Q9NWF9 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
RNF216Q9NWF9 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
RNF216Q9NWF9 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC22.63■■□□□ 1.21
RNF216Q9NWF9 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
RNF216Q9NWF9 MCRIP2P1-201ENST00000394346 511 ntBASIC22.63■■□□□ 1.21
RNF216Q9NWF9 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC22.63■■□□□ 1.21
RNF216Q9NWF9 AL139294.1-201ENST00000435739 512 ntTSL 2 BASIC22.63■■□□□ 1.21
RNF216Q9NWF9 MTCO2P3-201ENST00000442543 421 ntBASIC22.63■■□□□ 1.21
RNF216Q9NWF9 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC22.63■■□□□ 1.21
RNF216Q9NWF9 AC018635.1-201ENST00000468292 1030 ntBASIC22.63■■□□□ 1.21
RNF216Q9NWF9 AP003041.2-201ENST00000525666 1180 ntBASIC22.63■■□□□ 1.21
RNF216Q9NWF9 UNC93B5-201ENST00000530315 699 ntBASIC22.63■■□□□ 1.21
RNF216Q9NWF9 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC22.63■■□□□ 1.21
RNF216Q9NWF9 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC22.63■■□□□ 1.21
RNF216Q9NWF9 PLSCR2-207ENST00000613069 1208 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
RNF216Q9NWF9 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC22.63■■□□□ 1.21
RNF216Q9NWF9 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC22.63■■□□□ 1.21
RNF216Q9NWF9 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
RNF216Q9NWF9 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
RNF216Q9NWF9 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC22.63■■□□□ 1.21
RNF216Q9NWF9 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
RNF216Q9NWF9 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
RNF216Q9NWF9 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC22.62■■□□□ 1.21
RNF216Q9NWF9 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC22.62■■□□□ 1.21
RNF216Q9NWF9 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC22.62■■□□□ 1.21
RNF216Q9NWF9 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
RNF216Q9NWF9 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
RNF216Q9NWF9 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC22.62■■□□□ 1.21
RNF216Q9NWF9 MGST1-204ENST00000396209 979 ntAPPRIS P1 TSL 2 BASIC22.62■■□□□ 1.21
RNF216Q9NWF9 ATG10-IT1-201ENST00000396880 487 ntBASIC22.62■■□□□ 1.21
RNF216Q9NWF9 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC22.62■■□□□ 1.21
RNF216Q9NWF9 AC026366.1-201ENST00000488803 879 ntBASIC22.62■■□□□ 1.21
RNF216Q9NWF9 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC22.62■■□□□ 1.21
RNF216Q9NWF9 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
RNF216Q9NWF9 CYP2T3P-201ENST00000601990 817 ntBASIC22.62■■□□□ 1.21
RNF216Q9NWF9 AC005520.3-201ENST00000602874 370 ntBASIC22.62■■□□□ 1.21
RNF216Q9NWF9 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
RNF216Q9NWF9 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC22.62■■□□□ 1.21
RNF216Q9NWF9 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC22.62■■□□□ 1.21
RNF216Q9NWF9 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
RNF216Q9NWF9 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
RNF216Q9NWF9 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
RNF216Q9NWF9 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
RNF216Q9NWF9 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC22.62■■□□□ 1.21
RNF216Q9NWF9 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
RNF216Q9NWF9 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC22.61■■□□□ 1.21
RNF216Q9NWF9 AIRN-202ENST00000609176 1489 ntTSL 5 BASIC22.61■■□□□ 1.21
RNF216Q9NWF9 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC22.61■■□□□ 1.21
RNF216Q9NWF9 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC22.61■■□□□ 1.21
RNF216Q9NWF9 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
RNF216Q9NWF9 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
RNF216Q9NWF9 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC22.61■■□□□ 1.21
RNF216Q9NWF9 LINC00469-201ENST00000321800 708 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
RNF216Q9NWF9 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
RNF216Q9NWF9 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
RNF216Q9NWF9 AL356476.1-201ENST00000421481 480 ntTSL 5 BASIC22.61■■□□□ 1.21
RNF216Q9NWF9 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC22.61■■□□□ 1.21
RNF216Q9NWF9 OR2A1-AS1-201ENST00000462305 773 ntBASIC22.61■■□□□ 1.21
RNF216Q9NWF9 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC22.61■■□□□ 1.21
RNF216Q9NWF9 AC139491.3-201ENST00000509643 684 ntTSL 3 BASIC22.61■■□□□ 1.21
RNF216Q9NWF9 AC140125.1-201ENST00000515739 684 ntTSL 5 BASIC22.61■■□□□ 1.21
RNF216Q9NWF9 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC22.61■■□□□ 1.21
RNF216Q9NWF9 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
RNF216Q9NWF9 ZNF826P-202ENST00000542380 1067 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
RNF216Q9NWF9 AC006058.3-201ENST00000606217 1069 ntBASIC22.61■■□□□ 1.21
RNF216Q9NWF9 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
RNF216Q9NWF9 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
RNF216Q9NWF9 AC083899.2-201ENST00000423285 1376 ntBASIC22.61■■□□□ 1.21
RNF216Q9NWF9 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
RNF216Q9NWF9 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
RNF216Q9NWF9 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
RNF216Q9NWF9 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
RNF216Q9NWF9 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC22.6■■□□□ 1.21
RNF216Q9NWF9 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
RNF216Q9NWF9 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms