Protein–RNA interactions for Protein: Q96FZ7

CHMP6, Charged multivesicular body protein 6, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6Q96FZ7 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC19.98■□□□□ 0.79
CHMP6Q96FZ7 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CHMP6Q96FZ7 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
CHMP6Q96FZ7 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CHMP6Q96FZ7 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC19.98■□□□□ 0.79
CHMP6Q96FZ7 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CHMP6Q96FZ7 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CHMP6Q96FZ7 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
CHMP6Q96FZ7 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
CHMP6Q96FZ7 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC19.98■□□□□ 0.79
CHMP6Q96FZ7 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
CHMP6Q96FZ7 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CHMP6Q96FZ7 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CHMP6Q96FZ7 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
CHMP6Q96FZ7 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CHMP6Q96FZ7 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CHMP6Q96FZ7 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
CHMP6Q96FZ7 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC19.98■□□□□ 0.79
CHMP6Q96FZ7 AICDA-202ENST00000537228 667 ntTSL 5 BASIC19.98■□□□□ 0.79
CHMP6Q96FZ7 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
CHMP6Q96FZ7 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
CHMP6Q96FZ7 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
CHMP6Q96FZ7 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC19.98■□□□□ 0.79
CHMP6Q96FZ7 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CHMP6Q96FZ7 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CHMP6Q96FZ7 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CHMP6Q96FZ7 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CHMP6Q96FZ7 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
CHMP6Q96FZ7 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CHMP6Q96FZ7 TP73-202ENST00000354437 2140 ntTSL 5 BASIC19.97■□□□□ 0.79
CHMP6Q96FZ7 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CHMP6Q96FZ7 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC19.97■□□□□ 0.79
CHMP6Q96FZ7 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CHMP6Q96FZ7 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC19.97■□□□□ 0.79
CHMP6Q96FZ7 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
CHMP6Q96FZ7 EDA-201ENST00000338901 1233 ntBASIC19.97■□□□□ 0.79
CHMP6Q96FZ7 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CHMP6Q96FZ7 IGHV3-19-201ENST00000521488 291 ntBASIC19.97■□□□□ 0.79
CHMP6Q96FZ7 MAG-206ENST00000597035 542 ntTSL 4 BASIC19.97■□□□□ 0.79
CHMP6Q96FZ7 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC19.97■□□□□ 0.79
CHMP6Q96FZ7 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CHMP6Q96FZ7 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
CHMP6Q96FZ7 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CHMP6Q96FZ7 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CHMP6Q96FZ7 AC079598.2-202ENST00000546624 1451 ntBASIC19.97■□□□□ 0.79
CHMP6Q96FZ7 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC19.97■□□□□ 0.79
CHMP6Q96FZ7 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CHMP6Q96FZ7 TSPY26P-201ENST00000476365 1326 ntBASIC19.97■□□□□ 0.79
CHMP6Q96FZ7 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CHMP6Q96FZ7 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
CHMP6Q96FZ7 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
CHMP6Q96FZ7 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
CHMP6Q96FZ7 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
CHMP6Q96FZ7 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC19.96■□□□□ 0.79
CHMP6Q96FZ7 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CHMP6Q96FZ7 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CHMP6Q96FZ7 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC19.96■□□□□ 0.79
CHMP6Q96FZ7 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC19.96■□□□□ 0.79
CHMP6Q96FZ7 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC19.96■□□□□ 0.79
CHMP6Q96FZ7 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CHMP6Q96FZ7 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC19.96■□□□□ 0.79
CHMP6Q96FZ7 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC19.96■□□□□ 0.79
CHMP6Q96FZ7 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CHMP6Q96FZ7 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC19.96■□□□□ 0.79
CHMP6Q96FZ7 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
CHMP6Q96FZ7 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC19.96■□□□□ 0.79
CHMP6Q96FZ7 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC19.96■□□□□ 0.79
CHMP6Q96FZ7 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CHMP6Q96FZ7 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC19.96■□□□□ 0.79
CHMP6Q96FZ7 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
CHMP6Q96FZ7 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CHMP6Q96FZ7 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
CHMP6Q96FZ7 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
CHMP6Q96FZ7 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC19.95■□□□□ 0.78
CHMP6Q96FZ7 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
CHMP6Q96FZ7 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CHMP6Q96FZ7 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC19.95■□□□□ 0.78
CHMP6Q96FZ7 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC19.95■□□□□ 0.78
CHMP6Q96FZ7 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
CHMP6Q96FZ7 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC19.95■□□□□ 0.78
CHMP6Q96FZ7 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
CHMP6Q96FZ7 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CHMP6Q96FZ7 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CHMP6Q96FZ7 AF213884.3-201ENST00000563833 479 ntBASIC19.95■□□□□ 0.78
CHMP6Q96FZ7 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC19.95■□□□□ 0.78
CHMP6Q96FZ7 AL355001.2-201ENST00000620617 1191 ntBASIC19.95■□□□□ 0.78
CHMP6Q96FZ7 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
CHMP6Q96FZ7 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
CHMP6Q96FZ7 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CHMP6Q96FZ7 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC19.95■□□□□ 0.78
CHMP6Q96FZ7 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
CHMP6Q96FZ7 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC19.95■□□□□ 0.78
CHMP6Q96FZ7 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC19.95■□□□□ 0.78
CHMP6Q96FZ7 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CHMP6Q96FZ7 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC19.95■□□□□ 0.78
CHMP6Q96FZ7 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CHMP6Q96FZ7 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CHMP6Q96FZ7 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC19.95■□□□□ 0.78
CHMP6Q96FZ7 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CHMP6Q96FZ7 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 57.6 ms