Protein–RNA interactions for Protein: Q5SXM2

SNAPC4, snRNA-activating protein complex subunit 4, humanhuman

Predictions only

Length 1,469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC4Q5SXM2 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC32.75■■■□□ 2.83
SNAPC4Q5SXM2 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC32.75■■■□□ 2.83
SNAPC4Q5SXM2 AP006587.1-201ENST00000534129 1502 ntBASIC32.75■■■□□ 2.83
SNAPC4Q5SXM2 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC32.75■■■□□ 2.83
SNAPC4Q5SXM2 YBX1P10-201ENST00000444752 975 ntBASIC32.75■■■□□ 2.83
SNAPC4Q5SXM2 CCR12P-201ENST00000446203 998 ntBASIC32.75■■■□□ 2.83
SNAPC4Q5SXM2 AC130371.2-201ENST00000619443 611 ntBASIC32.75■■■□□ 2.83
SNAPC4Q5SXM2 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC32.75■■■□□ 2.83
SNAPC4Q5SXM2 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC32.75■■■□□ 2.83
SNAPC4Q5SXM2 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC32.75■■■□□ 2.83
SNAPC4Q5SXM2 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC32.75■■■□□ 2.83
SNAPC4Q5SXM2 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC32.75■■■□□ 2.83
SNAPC4Q5SXM2 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC32.75■■■□□ 2.83
SNAPC4Q5SXM2 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC32.75■■■□□ 2.83
SNAPC4Q5SXM2 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC32.74■■■□□ 2.83
SNAPC4Q5SXM2 KRT18P38-201ENST00000449496 1282 ntBASIC32.74■■■□□ 2.83
SNAPC4Q5SXM2 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC32.74■■■□□ 2.83
SNAPC4Q5SXM2 CYGB-204ENST00000589342 815 ntTSL 3 BASIC32.74■■■□□ 2.83
SNAPC4Q5SXM2 AL691432.3-201ENST00000621860 400 ntBASIC32.74■■■□□ 2.83
SNAPC4Q5SXM2 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC32.74■■■□□ 2.83
SNAPC4Q5SXM2 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC32.74■■■□□ 2.83
SNAPC4Q5SXM2 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC32.74■■■□□ 2.83
SNAPC4Q5SXM2 KRT8P20-201ENST00000423953 1409 ntBASIC32.74■■■□□ 2.83
SNAPC4Q5SXM2 AC092338.2-201ENST00000568827 1415 ntBASIC32.74■■■□□ 2.83
SNAPC4Q5SXM2 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC32.74■■■□□ 2.83
SNAPC4Q5SXM2 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC32.74■■■□□ 2.83
SNAPC4Q5SXM2 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC32.74■■■□□ 2.83
SNAPC4Q5SXM2 KRT18P16-201ENST00000510337 1294 ntBASIC32.74■■■□□ 2.83
SNAPC4Q5SXM2 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC32.74■■■□□ 2.83
SNAPC4Q5SXM2 AC083849.1-201ENST00000615227 514 ntBASIC32.74■■■□□ 2.83
SNAPC4Q5SXM2 AC011298.2-201ENST00000617989 482 ntBASIC32.74■■■□□ 2.83
SNAPC4Q5SXM2 AC131212.4-201ENST00000623606 975 ntBASIC32.74■■■□□ 2.83
SNAPC4Q5SXM2 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC32.74■■■□□ 2.83
SNAPC4Q5SXM2 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC32.73■■■□□ 2.83
SNAPC4Q5SXM2 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC32.73■■■□□ 2.83
SNAPC4Q5SXM2 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC32.73■■■□□ 2.83
SNAPC4Q5SXM2 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC32.73■■■□□ 2.83
SNAPC4Q5SXM2 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC32.73■■■□□ 2.83
SNAPC4Q5SXM2 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC32.73■■■□□ 2.83
SNAPC4Q5SXM2 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC32.73■■■□□ 2.83
SNAPC4Q5SXM2 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC32.73■■■□□ 2.83
SNAPC4Q5SXM2 SLC25A1P2-201ENST00000430693 912 ntBASIC32.73■■■□□ 2.83
SNAPC4Q5SXM2 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC32.73■■■□□ 2.83
SNAPC4Q5SXM2 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC32.73■■■□□ 2.83
SNAPC4Q5SXM2 HOMER2P1-201ENST00000455653 964 ntBASIC32.73■■■□□ 2.83
SNAPC4Q5SXM2 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC32.73■■■□□ 2.83
SNAPC4Q5SXM2 AL441883.1-201ENST00000566170 1045 ntBASIC32.73■■■□□ 2.83
SNAPC4Q5SXM2 NDUFV2-AS1-203ENST00000608008 779 ntBASIC32.73■■■□□ 2.83
SNAPC4Q5SXM2 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC32.73■■■□□ 2.83
SNAPC4Q5SXM2 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC32.72■■■□□ 2.83
SNAPC4Q5SXM2 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC32.72■■■□□ 2.83
SNAPC4Q5SXM2 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC32.72■■■□□ 2.83
SNAPC4Q5SXM2 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC32.72■■■□□ 2.83
SNAPC4Q5SXM2 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC32.72■■■□□ 2.83
SNAPC4Q5SXM2 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC32.72■■■□□ 2.83
SNAPC4Q5SXM2 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC32.72■■■□□ 2.83
SNAPC4Q5SXM2 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC32.72■■■□□ 2.83
SNAPC4Q5SXM2 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC32.72■■■□□ 2.83
SNAPC4Q5SXM2 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC32.72■■■□□ 2.83
SNAPC4Q5SXM2 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC32.71■■■□□ 2.83
SNAPC4Q5SXM2 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC32.71■■■□□ 2.83
SNAPC4Q5SXM2 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC32.71■■■□□ 2.83
SNAPC4Q5SXM2 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC32.71■■■□□ 2.83
SNAPC4Q5SXM2 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC32.71■■■□□ 2.83
SNAPC4Q5SXM2 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC32.71■■■□□ 2.83
SNAPC4Q5SXM2 GOLGA2P6-201ENST00000340929 2049 ntBASIC32.71■■■□□ 2.83
SNAPC4Q5SXM2 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC32.71■■■□□ 2.83
SNAPC4Q5SXM2 PVRIG2P-201ENST00000435460 978 ntBASIC32.71■■■□□ 2.83
SNAPC4Q5SXM2 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC32.71■■■□□ 2.83
SNAPC4Q5SXM2 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC32.71■■■□□ 2.83
SNAPC4Q5SXM2 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC32.71■■■□□ 2.83
SNAPC4Q5SXM2 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC32.71■■■□□ 2.83
SNAPC4Q5SXM2 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC32.7■■■□□ 2.83
SNAPC4Q5SXM2 STK25-204ENST00000405585 1643 ntTSL 2 BASIC32.7■■■□□ 2.83
SNAPC4Q5SXM2 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC32.7■■■□□ 2.83
SNAPC4Q5SXM2 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC32.7■■■□□ 2.83
SNAPC4Q5SXM2 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC32.7■■■□□ 2.83
SNAPC4Q5SXM2 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC32.7■■■□□ 2.83
SNAPC4Q5SXM2 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC32.7■■■□□ 2.83
SNAPC4Q5SXM2 PTK2-216ENST00000519881 863 ntTSL 3 BASIC32.7■■■□□ 2.83
SNAPC4Q5SXM2 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC32.7■■■□□ 2.83
SNAPC4Q5SXM2 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC32.7■■■□□ 2.83
SNAPC4Q5SXM2 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC32.7■■■□□ 2.83
SNAPC4Q5SXM2 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC32.7■■■□□ 2.83
SNAPC4Q5SXM2 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC32.7■■■□□ 2.82
SNAPC4Q5SXM2 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC32.7■■■□□ 2.82
SNAPC4Q5SXM2 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC32.7■■■□□ 2.82
SNAPC4Q5SXM2 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC32.69■■■□□ 2.82
SNAPC4Q5SXM2 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC32.69■■■□□ 2.82
SNAPC4Q5SXM2 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC32.69■■■□□ 2.82
SNAPC4Q5SXM2 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC32.69■■■□□ 2.82
SNAPC4Q5SXM2 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC32.69■■■□□ 2.82
SNAPC4Q5SXM2 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC32.69■■■□□ 2.82
SNAPC4Q5SXM2 TSPY21P-201ENST00000433481 731 ntBASIC32.69■■■□□ 2.82
SNAPC4Q5SXM2 TSPY23P-201ENST00000440136 739 ntBASIC32.69■■■□□ 2.82
SNAPC4Q5SXM2 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC32.69■■■□□ 2.82
SNAPC4Q5SXM2 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC32.69■■■□□ 2.82
SNAPC4Q5SXM2 IRF5-214ENST00000613821 595 ntTSL 5 BASIC32.69■■■□□ 2.82
SNAPC4Q5SXM2 AL023973.1-201ENST00000624619 620 ntBASIC32.69■■■□□ 2.82
SNAPC4Q5SXM2 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC32.69■■■□□ 2.82
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms