Protein–RNA interactions for Protein: P59108

Cpne2, Copine-2, mousemouse

Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne2P59108 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
Cpne2P59108 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Cpne2P59108 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Cpne2P59108 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Cpne2P59108 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Cpne2P59108 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
Cpne2P59108 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Cpne2P59108 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
Cpne2P59108 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Cpne2P59108 Gm42642-201ENSMUST00000200683 355 ntBASIC14.52□□□□□ -0.09
Cpne2P59108 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
Cpne2P59108 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
Cpne2P59108 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
Cpne2P59108 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC14.52□□□□□ -0.09
Cpne2P59108 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Cpne2P59108 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
Cpne2P59108 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Cpne2P59108 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Cpne2P59108 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Cpne2P59108 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cpne2P59108 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cpne2P59108 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cpne2P59108 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC14.51□□□□□ -0.09
Cpne2P59108 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Cpne2P59108 Gm9867-201ENSMUST00000192212 2647 ntBASIC14.51□□□□□ -0.09
Cpne2P59108 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cpne2P59108 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cpne2P59108 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cpne2P59108 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC14.51□□□□□ -0.09
Cpne2P59108 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cpne2P59108 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cpne2P59108 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cpne2P59108 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Cpne2P59108 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cpne2P59108 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Cpne2P59108 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cpne2P59108 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Cpne2P59108 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cpne2P59108 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cpne2P59108 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cpne2P59108 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cpne2P59108 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cpne2P59108 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cpne2P59108 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cpne2P59108 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC14.5□□□□□ -0.09
Cpne2P59108 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC14.5□□□□□ -0.09
Cpne2P59108 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC14.5□□□□□ -0.09
Cpne2P59108 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cpne2P59108 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Cpne2P59108 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Cpne2P59108 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cpne2P59108 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cpne2P59108 Gm37166-201ENSMUST00000195473 2474 ntBASIC14.5□□□□□ -0.09
Cpne2P59108 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Cpne2P59108 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cpne2P59108 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Cpne2P59108 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC14.5□□□□□ -0.09
Cpne2P59108 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC14.5□□□□□ -0.09
Cpne2P59108 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cpne2P59108 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cpne2P59108 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cpne2P59108 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cpne2P59108 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cpne2P59108 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cpne2P59108 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cpne2P59108 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cpne2P59108 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cpne2P59108 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cpne2P59108 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cpne2P59108 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cpne2P59108 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cpne2P59108 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC14.49□□□□□ -0.09
Cpne2P59108 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Cpne2P59108 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cpne2P59108 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cpne2P59108 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cpne2P59108 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cpne2P59108 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cpne2P59108 Gm44443-201ENSMUST00000204396 5633 ntBASIC14.48□□□□□ -0.09
Cpne2P59108 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cpne2P59108 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cpne2P59108 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cpne2P59108 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Cpne2P59108 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC14.48□□□□□ -0.09
Cpne2P59108 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cpne2P59108 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cpne2P59108 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cpne2P59108 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cpne2P59108 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Cpne2P59108 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cpne2P59108 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
Cpne2P59108 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC14.48□□□□□ -0.09
Cpne2P59108 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cpne2P59108 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC14.48□□□□□ -0.09
Cpne2P59108 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Cpne2P59108 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cpne2P59108 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Cpne2P59108 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC14.48□□□□□ -0.09
Cpne2P59108 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cpne2P59108 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 39.7 ms