Protein–RNA interactions for Protein: P53671

LIMK2, LIM domain kinase 2, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2P53671 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
LIMK2P53671 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
LIMK2P53671 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
LIMK2P53671 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
LIMK2P53671 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
LIMK2P53671 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC20.04■□□□□ 0.8
LIMK2P53671 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC20.04■□□□□ 0.8
LIMK2P53671 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC20.04■□□□□ 0.8
LIMK2P53671 BET1L-207ENST00000529614 560 ntTSL 5 BASIC20.04■□□□□ 0.8
LIMK2P53671 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC20.04■□□□□ 0.8
LIMK2P53671 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
LIMK2P53671 ITM2C-210ENST00000620962 501 ntBASIC20.04■□□□□ 0.8
LIMK2P53671 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC20.04■□□□□ 0.8
LIMK2P53671 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC20.04■□□□□ 0.8
LIMK2P53671 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
LIMK2P53671 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC20.04■□□□□ 0.8
LIMK2P53671 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
LIMK2P53671 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC20.03■□□□□ 0.8
LIMK2P53671 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
LIMK2P53671 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
LIMK2P53671 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
LIMK2P53671 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
LIMK2P53671 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
LIMK2P53671 DUSP5P2-201ENST00000426873 1033 ntBASIC20.03■□□□□ 0.8
LIMK2P53671 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC20.03■□□□□ 0.8
LIMK2P53671 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC20.03■□□□□ 0.8
LIMK2P53671 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC20.03■□□□□ 0.8
LIMK2P53671 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
LIMK2P53671 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
LIMK2P53671 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC20.03■□□□□ 0.8
LIMK2P53671 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC20.03■□□□□ 0.8
LIMK2P53671 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
LIMK2P53671 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
LIMK2P53671 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC20.02■□□□□ 0.8
LIMK2P53671 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
LIMK2P53671 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
LIMK2P53671 STK25-205ENST00000405883 1904 ntTSL 2 BASIC20.02■□□□□ 0.8
LIMK2P53671 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC20.02■□□□□ 0.8
LIMK2P53671 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
LIMK2P53671 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC20.02■□□□□ 0.8
LIMK2P53671 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
LIMK2P53671 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
LIMK2P53671 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
LIMK2P53671 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC20.02■□□□□ 0.8
LIMK2P53671 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC20.02■□□□□ 0.8
LIMK2P53671 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC20.02■□□□□ 0.8
LIMK2P53671 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC20.02■□□□□ 0.8
LIMK2P53671 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
LIMK2P53671 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
LIMK2P53671 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
LIMK2P53671 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
LIMK2P53671 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC20.02■□□□□ 0.8
LIMK2P53671 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC20.02■□□□□ 0.8
LIMK2P53671 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
LIMK2P53671 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
LIMK2P53671 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
LIMK2P53671 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
LIMK2P53671 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC20.02■□□□□ 0.79
LIMK2P53671 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.79
LIMK2P53671 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
LIMK2P53671 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
LIMK2P53671 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
LIMK2P53671 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
LIMK2P53671 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
LIMK2P53671 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
LIMK2P53671 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
LIMK2P53671 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC20.01■□□□□ 0.79
LIMK2P53671 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC20.01■□□□□ 0.79
LIMK2P53671 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC20.01■□□□□ 0.79
LIMK2P53671 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
LIMK2P53671 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
LIMK2P53671 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
LIMK2P53671 KRT18P29-201ENST00000397031 1267 ntBASIC20.01■□□□□ 0.79
LIMK2P53671 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC20.01■□□□□ 0.79
LIMK2P53671 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC20.01■□□□□ 0.79
LIMK2P53671 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
LIMK2P53671 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC20.01■□□□□ 0.79
LIMK2P53671 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
LIMK2P53671 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC20.01■□□□□ 0.79
LIMK2P53671 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
LIMK2P53671 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC20.01■□□□□ 0.79
LIMK2P53671 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
LIMK2P53671 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
LIMK2P53671 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
LIMK2P53671 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC20.01■□□□□ 0.79
LIMK2P53671 AC116562.4-201ENST00000641316 2276 ntBASIC20.01■□□□□ 0.79
LIMK2P53671 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC20.01■□□□□ 0.79
LIMK2P53671 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
LIMK2P53671 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC20■□□□□ 0.79
LIMK2P53671 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
LIMK2P53671 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC20■□□□□ 0.79
LIMK2P53671 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
LIMK2P53671 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC20■□□□□ 0.79
LIMK2P53671 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC20■□□□□ 0.79
LIMK2P53671 LSM12P1-201ENST00000411836 588 ntBASIC20■□□□□ 0.79
LIMK2P53671 SERPINH1P1-201ENST00000419794 1249 ntBASIC20■□□□□ 0.79
LIMK2P53671 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC20■□□□□ 0.79
LIMK2P53671 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC20■□□□□ 0.79
LIMK2P53671 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
LIMK2P53671 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC20■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms