Protein–RNA interactions for Protein: P50220

Nkx2-1, Homeobox protein Nkx-2.1, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-1P50220 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Nkx2-1P50220 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Nkx2-1P50220 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
Nkx2-1P50220 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Nkx2-1P50220 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Nkx2-1P50220 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Nkx2-1P50220 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Nkx2-1P50220 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Nkx2-1P50220 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Nkx2-1P50220 Gm13216-201ENSMUST00000117145 591 ntBASIC14.27□□□□□ -0.13
Nkx2-1P50220 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Nkx2-1P50220 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC14.27□□□□□ -0.13
Nkx2-1P50220 Gm5874-201ENSMUST00000096101 508 ntBASIC14.27□□□□□ -0.13
Nkx2-1P50220 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Nkx2-1P50220 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC14.27□□□□□ -0.13
Nkx2-1P50220 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC14.27□□□□□ -0.13
Nkx2-1P50220 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Nkx2-1P50220 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Nkx2-1P50220 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC14.27□□□□□ -0.13
Nkx2-1P50220 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Nkx2-1P50220 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Nkx2-1P50220 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Nkx2-1P50220 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nkx2-1P50220 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC14.26□□□□□ -0.13
Nkx2-1P50220 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nkx2-1P50220 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nkx2-1P50220 AC125311.2-201ENSMUST00000227477 1940 ntBASIC14.26□□□□□ -0.13
Nkx2-1P50220 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC14.26□□□□□ -0.13
Nkx2-1P50220 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Nkx2-1P50220 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC14.26□□□□□ -0.13
Nkx2-1P50220 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC14.26□□□□□ -0.13
Nkx2-1P50220 Gm18671-201ENSMUST00000214826 683 ntBASIC14.26□□□□□ -0.13
Nkx2-1P50220 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC14.26□□□□□ -0.13
Nkx2-1P50220 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nkx2-1P50220 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nkx2-1P50220 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC14.26□□□□□ -0.13
Nkx2-1P50220 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nkx2-1P50220 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Nkx2-1P50220 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nkx2-1P50220 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nkx2-1P50220 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nkx2-1P50220 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nkx2-1P50220 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nkx2-1P50220 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Nkx2-1P50220 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Nkx2-1P50220 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC14.25□□□□□ -0.13
Nkx2-1P50220 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nkx2-1P50220 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nkx2-1P50220 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nkx2-1P50220 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC14.25□□□□□ -0.13
Nkx2-1P50220 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC14.25□□□□□ -0.13
Nkx2-1P50220 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Nkx2-1P50220 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nkx2-1P50220 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Nkx2-1P50220 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nkx2-1P50220 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nkx2-1P50220 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nkx2-1P50220 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nkx2-1P50220 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nkx2-1P50220 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nkx2-1P50220 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Nkx2-1P50220 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Nkx2-1P50220 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nkx2-1P50220 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nkx2-1P50220 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nkx2-1P50220 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nkx2-1P50220 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Nkx2-1P50220 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nkx2-1P50220 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nkx2-1P50220 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nkx2-1P50220 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Nkx2-1P50220 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Nkx2-1P50220 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nkx2-1P50220 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nkx2-1P50220 Mir8112-201ENSMUST00000184382 131 ntBASIC14.24□□□□□ -0.13
Nkx2-1P50220 Gm29791-202ENSMUST00000207888 369 ntBASIC14.24□□□□□ -0.13
Nkx2-1P50220 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nkx2-1P50220 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC14.24□□□□□ -0.13
Nkx2-1P50220 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nkx2-1P50220 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nkx2-1P50220 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nkx2-1P50220 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nkx2-1P50220 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nkx2-1P50220 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nkx2-1P50220 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nkx2-1P50220 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Nkx2-1P50220 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC14.23□□□□□ -0.13
Nkx2-1P50220 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nkx2-1P50220 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nkx2-1P50220 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nkx2-1P50220 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
Nkx2-1P50220 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nkx2-1P50220 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nkx2-1P50220 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nkx2-1P50220 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nkx2-1P50220 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC14.23□□□□□ -0.13
Nkx2-1P50220 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC14.23□□□□□ -0.13
Nkx2-1P50220 Gm42642-201ENSMUST00000200683 355 ntBASIC14.23□□□□□ -0.13
Nkx2-1P50220 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC14.23□□□□□ -0.13
Nkx2-1P50220 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 16.4 ms