Protein–RNA interactions for Protein: P49840

GSK3A, Glycogen synthase kinase-3 alpha, humanhuman

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GSK3AP49840 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC17.33■□□□□ 0.36
GSK3AP49840 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC17.33■□□□□ 0.36
GSK3AP49840 AC073111.5-205ENST00000641717 521 ntBASIC17.33■□□□□ 0.36
GSK3AP49840 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
GSK3AP49840 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
GSK3AP49840 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
GSK3AP49840 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
GSK3AP49840 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
GSK3AP49840 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
GSK3AP49840 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC17.33■□□□□ 0.36
GSK3AP49840 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
GSK3AP49840 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
GSK3AP49840 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
GSK3AP49840 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
GSK3AP49840 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC17.32■□□□□ 0.36
GSK3AP49840 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
GSK3AP49840 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
GSK3AP49840 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC17.32■□□□□ 0.36
GSK3AP49840 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
GSK3AP49840 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
GSK3AP49840 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
GSK3AP49840 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC17.32■□□□□ 0.36
GSK3AP49840 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC17.32■□□□□ 0.36
GSK3AP49840 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC17.32■□□□□ 0.36
GSK3AP49840 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
GSK3AP49840 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
GSK3AP49840 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
GSK3AP49840 AL512625.2-201ENST00000417533 625 ntBASIC17.32■□□□□ 0.36
GSK3AP49840 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
GSK3AP49840 AC093787.1-201ENST00000450396 207 ntBASIC17.32■□□□□ 0.36
GSK3AP49840 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
GSK3AP49840 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
GSK3AP49840 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC17.32■□□□□ 0.36
GSK3AP49840 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
GSK3AP49840 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
GSK3AP49840 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
GSK3AP49840 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC17.32■□□□□ 0.36
GSK3AP49840 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC17.32■□□□□ 0.36
GSK3AP49840 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
GSK3AP49840 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC17.32■□□□□ 0.36
GSK3AP49840 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC17.31■□□□□ 0.36
GSK3AP49840 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC17.31■□□□□ 0.36
GSK3AP49840 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC17.31■□□□□ 0.36
GSK3AP49840 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
GSK3AP49840 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC17.31■□□□□ 0.36
GSK3AP49840 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC17.31■□□□□ 0.36
GSK3AP49840 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
GSK3AP49840 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
GSK3AP49840 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC17.31■□□□□ 0.36
GSK3AP49840 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC17.31■□□□□ 0.36
GSK3AP49840 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
GSK3AP49840 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC17.31■□□□□ 0.36
GSK3AP49840 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
GSK3AP49840 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
GSK3AP49840 CDCA4P2-201ENST00000441182 718 ntBASIC17.31■□□□□ 0.36
GSK3AP49840 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC17.31■□□□□ 0.36
GSK3AP49840 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
GSK3AP49840 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC17.31■□□□□ 0.36
GSK3AP49840 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
GSK3AP49840 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
GSK3AP49840 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC17.31■□□□□ 0.36
GSK3AP49840 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
GSK3AP49840 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
GSK3AP49840 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC17.31■□□□□ 0.36
GSK3AP49840 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
GSK3AP49840 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
GSK3AP49840 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC17.3■□□□□ 0.36
GSK3AP49840 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
GSK3AP49840 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
GSK3AP49840 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
GSK3AP49840 PTBP1P-201ENST00000554374 1601 ntBASIC17.3■□□□□ 0.36
GSK3AP49840 TMEM179-206ENST00000616017 1645 ntBASIC17.3■□□□□ 0.36
GSK3AP49840 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
GSK3AP49840 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC17.3■□□□□ 0.36
GSK3AP49840 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
GSK3AP49840 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC17.3■□□□□ 0.36
GSK3AP49840 AC133552.2-202ENST00000575694 574 ntBASIC17.3■□□□□ 0.36
GSK3AP49840 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC17.3■□□□□ 0.36
GSK3AP49840 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC17.3■□□□□ 0.36
GSK3AP49840 AL589743.5-201ENST00000616611 1050 ntBASIC17.3■□□□□ 0.36
GSK3AP49840 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC17.3■□□□□ 0.36
GSK3AP49840 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
GSK3AP49840 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
GSK3AP49840 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
GSK3AP49840 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
GSK3AP49840 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC17.3■□□□□ 0.36
GSK3AP49840 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC17.3■□□□□ 0.36
GSK3AP49840 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC17.3■□□□□ 0.36
GSK3AP49840 AC116562.4-201ENST00000641316 2276 ntBASIC17.3■□□□□ 0.36
GSK3AP49840 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
GSK3AP49840 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
GSK3AP49840 CD37-204ENST00000535669 1674 ntTSL 2 BASIC17.29■□□□□ 0.36
GSK3AP49840 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
GSK3AP49840 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
GSK3AP49840 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC17.29■□□□□ 0.36
GSK3AP49840 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
GSK3AP49840 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
GSK3AP49840 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
GSK3AP49840 LBX2-AS1-202ENST00000603175 2083 ntBASIC17.29■□□□□ 0.36
GSK3AP49840 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 49.3 ms