Protein–RNA interactions for Protein: P42581

Hmx3, Homeobox protein HMX3, mousemouse

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmx3P42581 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hmx3P42581 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC14.34□□□□□ -0.11
Hmx3P42581 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hmx3P42581 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hmx3P42581 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hmx3P42581 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hmx3P42581 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hmx3P42581 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hmx3P42581 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hmx3P42581 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hmx3P42581 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Hmx3P42581 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hmx3P42581 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hmx3P42581 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Hmx3P42581 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Hmx3P42581 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hmx3P42581 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Hmx3P42581 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hmx3P42581 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hmx3P42581 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hmx3P42581 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hmx3P42581 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hmx3P42581 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Hmx3P42581 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Hmx3P42581 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hmx3P42581 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hmx3P42581 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hmx3P42581 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Hmx3P42581 Gm37805-201ENSMUST00000192612 1094 ntBASIC14.33□□□□□ -0.12
Hmx3P42581 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC14.33□□□□□ -0.12
Hmx3P42581 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hmx3P42581 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Hmx3P42581 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Hmx3P42581 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Hmx3P42581 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hmx3P42581 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hmx3P42581 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Hmx3P42581 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hmx3P42581 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hmx3P42581 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hmx3P42581 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hmx3P42581 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hmx3P42581 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hmx3P42581 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hmx3P42581 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hmx3P42581 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Hmx3P42581 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC14.33□□□□□ -0.12
Hmx3P42581 Gm10710-201ENSMUST00000047876 3971 ntBASIC14.32□□□□□ -0.12
Hmx3P42581 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hmx3P42581 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hmx3P42581 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hmx3P42581 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Hmx3P42581 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hmx3P42581 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hmx3P42581 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hmx3P42581 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC14.32□□□□□ -0.12
Hmx3P42581 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hmx3P42581 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Hmx3P42581 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Hmx3P42581 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC14.32□□□□□ -0.12
Hmx3P42581 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hmx3P42581 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC14.32□□□□□ -0.12
Hmx3P42581 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hmx3P42581 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hmx3P42581 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hmx3P42581 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hmx3P42581 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Hmx3P42581 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hmx3P42581 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC14.32□□□□□ -0.12
Hmx3P42581 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Hmx3P42581 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Hmx3P42581 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hmx3P42581 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Hmx3P42581 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Hmx3P42581 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hmx3P42581 Gm8309-201ENSMUST00000206627 1448 ntBASIC14.32□□□□□ -0.12
Hmx3P42581 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Hmx3P42581 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Hmx3P42581 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Hmx3P42581 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Hmx3P42581 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Hmx3P42581 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC14.31□□□□□ -0.12
Hmx3P42581 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC14.31□□□□□ -0.12
Hmx3P42581 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Hmx3P42581 Gm8969-201ENSMUST00000199694 526 ntBASIC14.31□□□□□ -0.12
Hmx3P42581 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Hmx3P42581 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Hmx3P42581 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Hmx3P42581 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Hmx3P42581 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC14.31□□□□□ -0.12
Hmx3P42581 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Hmx3P42581 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Hmx3P42581 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC14.31□□□□□ -0.12
Hmx3P42581 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC14.31□□□□□ -0.12
Hmx3P42581 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Hmx3P42581 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Hmx3P42581 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Hmx3P42581 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Hmx3P42581 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Hmx3P42581 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 21.2 ms