Protein–RNA interactions for Protein: O60925

PFDN1, Prefoldin subunit 1, humanhuman

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1O60925 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC17.86■□□□□ 0.45
PFDN1O60925 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
PFDN1O60925 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC17.85■□□□□ 0.45
PFDN1O60925 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PFDN1O60925 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PFDN1O60925 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
PFDN1O60925 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PFDN1O60925 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PFDN1O60925 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PFDN1O60925 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
PFDN1O60925 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
PFDN1O60925 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
PFDN1O60925 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
PFDN1O60925 BOD1-206ENST00000480951 814 ntTSL 2 BASIC17.85■□□□□ 0.45
PFDN1O60925 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC17.85■□□□□ 0.45
PFDN1O60925 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
PFDN1O60925 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC17.85■□□□□ 0.45
PFDN1O60925 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PFDN1O60925 AC067852.2-201ENST00000590513 2313 ntBASIC17.85■□□□□ 0.45
PFDN1O60925 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
PFDN1O60925 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
PFDN1O60925 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
PFDN1O60925 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
PFDN1O60925 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PFDN1O60925 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
PFDN1O60925 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PFDN1O60925 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PFDN1O60925 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC17.84■□□□□ 0.45
PFDN1O60925 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC17.84■□□□□ 0.45
PFDN1O60925 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PFDN1O60925 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PFDN1O60925 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
PFDN1O60925 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
PFDN1O60925 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PFDN1O60925 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
PFDN1O60925 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
PFDN1O60925 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PFDN1O60925 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC17.84■□□□□ 0.45
PFDN1O60925 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
PFDN1O60925 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
PFDN1O60925 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC17.84■□□□□ 0.45
PFDN1O60925 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PFDN1O60925 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC17.84■□□□□ 0.45
PFDN1O60925 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC17.84■□□□□ 0.45
PFDN1O60925 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
PFDN1O60925 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PFDN1O60925 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PFDN1O60925 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.45
PFDN1O60925 MKRN4P-201ENST00000444706 1521 ntBASIC17.83■□□□□ 0.45
PFDN1O60925 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC17.83■□□□□ 0.45
PFDN1O60925 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
PFDN1O60925 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC17.83■□□□□ 0.45
PFDN1O60925 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.45
PFDN1O60925 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
PFDN1O60925 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC17.83■□□□□ 0.45
PFDN1O60925 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
PFDN1O60925 PCDHA12-202ENST00000613593 2588 ntBASIC17.83■□□□□ 0.44
PFDN1O60925 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.44
PFDN1O60925 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
PFDN1O60925 AC025884.2-201ENST00000553429 711 ntBASIC17.83■□□□□ 0.44
PFDN1O60925 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
PFDN1O60925 FP700111.2-201ENST00000619190 1892 ntBASIC17.83■□□□□ 0.44
PFDN1O60925 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
PFDN1O60925 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
PFDN1O60925 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
PFDN1O60925 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
PFDN1O60925 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
PFDN1O60925 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC17.83■□□□□ 0.44
PFDN1O60925 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
PFDN1O60925 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
PFDN1O60925 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
PFDN1O60925 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
PFDN1O60925 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC17.83■□□□□ 0.44
PFDN1O60925 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
PFDN1O60925 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC17.82■□□□□ 0.44
PFDN1O60925 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PFDN1O60925 AL513477.1-201ENST00000602865 2407 ntBASIC17.82■□□□□ 0.44
PFDN1O60925 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC17.82■□□□□ 0.44
PFDN1O60925 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PFDN1O60925 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PFDN1O60925 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC17.82■□□□□ 0.44
PFDN1O60925 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC17.82■□□□□ 0.44
PFDN1O60925 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
PFDN1O60925 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PFDN1O60925 AC087741.3-201ENST00000624270 1347 ntBASIC17.82■□□□□ 0.44
PFDN1O60925 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
PFDN1O60925 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
PFDN1O60925 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
PFDN1O60925 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC17.82■□□□□ 0.44
PFDN1O60925 EML3-212ENST00000494176 2901 ntTSL 2 BASIC17.82■□□□□ 0.44
PFDN1O60925 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PFDN1O60925 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
PFDN1O60925 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC17.82■□□□□ 0.44
PFDN1O60925 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
PFDN1O60925 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC17.82■□□□□ 0.44
PFDN1O60925 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PFDN1O60925 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
PFDN1O60925 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PFDN1O60925 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PFDN1O60925 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms