Protein–RNA interactions for Protein: A0A075B6C2

Trav13-4-dv7, T cell receptor alpha variable 13-4-DV7 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13-4-dv7A0A075B6C2 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Trav13-4-dv7A0A075B6C2 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav13-4-dv7A0A075B6C2 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav13-4-dv7A0A075B6C2 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav13-4-dv7A0A075B6C2 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav13-4-dv7A0A075B6C2 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav13-4-dv7A0A075B6C2 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Trav13-4-dv7A0A075B6C2 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC11.86□□□□□ -0.51
Trav13-4-dv7A0A075B6C2 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC11.86□□□□□ -0.51
Trav13-4-dv7A0A075B6C2 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC11.86□□□□□ -0.51
Trav13-4-dv7A0A075B6C2 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC11.86□□□□□ -0.51
Trav13-4-dv7A0A075B6C2 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Trav13-4-dv7A0A075B6C2 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Trav13-4-dv7A0A075B6C2 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
Trav13-4-dv7A0A075B6C2 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Trav13-4-dv7A0A075B6C2 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav13-4-dv7A0A075B6C2 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav13-4-dv7A0A075B6C2 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav13-4-dv7A0A075B6C2 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav13-4-dv7A0A075B6C2 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav13-4-dv7A0A075B6C2 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav13-4-dv7A0A075B6C2 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav13-4-dv7A0A075B6C2 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Trav13-4-dv7A0A075B6C2 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Trav13-4-dv7A0A075B6C2 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav13-4-dv7A0A075B6C2 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav13-4-dv7A0A075B6C2 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav13-4-dv7A0A075B6C2 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav13-4-dv7A0A075B6C2 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav13-4-dv7A0A075B6C2 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav13-4-dv7A0A075B6C2 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav13-4-dv7A0A075B6C2 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav13-4-dv7A0A075B6C2 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC11.85□□□□□ -0.51
Trav13-4-dv7A0A075B6C2 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav13-4-dv7A0A075B6C2 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav13-4-dv7A0A075B6C2 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC11.85□□□□□ -0.51
Trav13-4-dv7A0A075B6C2 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
Trav13-4-dv7A0A075B6C2 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav13-4-dv7A0A075B6C2 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav13-4-dv7A0A075B6C2 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC11.85□□□□□ -0.51
Trav13-4-dv7A0A075B6C2 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Trav13-4-dv7A0A075B6C2 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC11.85□□□□□ -0.51
Trav13-4-dv7A0A075B6C2 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav13-4-dv7A0A075B6C2 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav13-4-dv7A0A075B6C2 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav13-4-dv7A0A075B6C2 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav13-4-dv7A0A075B6C2 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav13-4-dv7A0A075B6C2 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC11.85□□□□□ -0.51
Trav13-4-dv7A0A075B6C2 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav13-4-dv7A0A075B6C2 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav13-4-dv7A0A075B6C2 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Trav13-4-dv7A0A075B6C2 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC11.85□□□□□ -0.51
Trav13-4-dv7A0A075B6C2 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav13-4-dv7A0A075B6C2 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC11.84□□□□□ -0.51
Trav13-4-dv7A0A075B6C2 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav13-4-dv7A0A075B6C2 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav13-4-dv7A0A075B6C2 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav13-4-dv7A0A075B6C2 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Trav13-4-dv7A0A075B6C2 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC11.84□□□□□ -0.51
Trav13-4-dv7A0A075B6C2 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Trav13-4-dv7A0A075B6C2 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav13-4-dv7A0A075B6C2 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav13-4-dv7A0A075B6C2 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Trav13-4-dv7A0A075B6C2 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav13-4-dv7A0A075B6C2 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Trav13-4-dv7A0A075B6C2 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav13-4-dv7A0A075B6C2 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav13-4-dv7A0A075B6C2 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC11.84□□□□□ -0.51
Trav13-4-dv7A0A075B6C2 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Trav13-4-dv7A0A075B6C2 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC11.84□□□□□ -0.51
Trav13-4-dv7A0A075B6C2 Gm29791-202ENSMUST00000207888 369 ntBASIC11.84□□□□□ -0.51
Trav13-4-dv7A0A075B6C2 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC11.84□□□□□ -0.51
Trav13-4-dv7A0A075B6C2 AC140264.2-202ENSMUST00000218746 817 ntBASIC11.84□□□□□ -0.51
Trav13-4-dv7A0A075B6C2 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav13-4-dv7A0A075B6C2 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
Trav13-4-dv7A0A075B6C2 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav13-4-dv7A0A075B6C2 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav13-4-dv7A0A075B6C2 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Trav13-4-dv7A0A075B6C2 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Trav13-4-dv7A0A075B6C2 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav13-4-dv7A0A075B6C2 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav13-4-dv7A0A075B6C2 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Trav13-4-dv7A0A075B6C2 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav13-4-dv7A0A075B6C2 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav13-4-dv7A0A075B6C2 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Trav13-4-dv7A0A075B6C2 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Trav13-4-dv7A0A075B6C2 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.51
Trav13-4-dv7A0A075B6C2 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
Trav13-4-dv7A0A075B6C2 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav13-4-dv7A0A075B6C2 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav13-4-dv7A0A075B6C2 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav13-4-dv7A0A075B6C2 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav13-4-dv7A0A075B6C2 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Trav13-4-dv7A0A075B6C2 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav13-4-dv7A0A075B6C2 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Trav13-4-dv7A0A075B6C2 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav13-4-dv7A0A075B6C2 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC11.83□□□□□ -0.52
Trav13-4-dv7A0A075B6C2 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav13-4-dv7A0A075B6C2 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Trav13-4-dv7A0A075B6C2 Gm37820-201ENSMUST00000194021 2147 ntBASIC11.83□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms