Protein–RNA interactions for Protein: Q9Y6Z2

LINC01558, Uncharacterized protein encoded by LINC01558, humanhuman

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01558Q9Y6Z2 HNRNPCP9-201ENST00000426952 859 ntBASIC3.28□□□□□ -1.88
LINC01558Q9Y6Z2 PCBP1-AS1-224ENST00000429599 1045 ntTSL 5 BASIC3.28□□□□□ -1.88
LINC01558Q9Y6Z2 AP001476.2-201ENST00000435738 355 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
LINC01558Q9Y6Z2 AC004771.1-201ENST00000438266 583 ntTSL 2 BASIC3.28□□□□□ -1.88
LINC01558Q9Y6Z2 LMCD1-AS1-202ENST00000439407 576 ntTSL 4 BASIC3.28□□□□□ -1.88
LINC01558Q9Y6Z2 AL096855.1-202ENST00000444276 439 ntTSL 2 BASIC3.28□□□□□ -1.88
LINC01558Q9Y6Z2 AL161646.1-201ENST00000447860 1013 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
LINC01558Q9Y6Z2 RPSAP7-201ENST00000456871 885 ntBASIC3.28□□□□□ -1.88
LINC01558Q9Y6Z2 TMEM222-204ENST00000466759 368 ntTSL 3 BASIC3.28□□□□□ -1.88
LINC01558Q9Y6Z2 RN7SL554P-201ENST00000468197 292 ntBASIC3.28□□□□□ -1.88
LINC01558Q9Y6Z2 AC010181.2-201ENST00000483759 482 ntTSL 3 BASIC3.28□□□□□ -1.88
LINC01558Q9Y6Z2 AC008799.2-201ENST00000484429 647 ntBASIC3.28□□□□□ -1.88
LINC01558Q9Y6Z2 DMKN-253ENST00000488892 414 ntAPPRIS ALT2 TSL 2 BASIC3.28□□□□□ -1.88
LINC01558Q9Y6Z2 PDCL3P4-201ENST00000489621 720 ntBASIC3.28□□□□□ -1.88
LINC01558Q9Y6Z2 AC106895.1-202ENST00000502956 777 ntTSL 3 BASIC3.28□□□□□ -1.88
LINC01558Q9Y6Z2 ASS1P8-201ENST00000504437 647 ntBASIC3.28□□□□□ -1.88
LINC01558Q9Y6Z2 AC098680.1-201ENST00000506010 367 ntTSL 3 BASIC3.28□□□□□ -1.88
LINC01558Q9Y6Z2 AC008496.1-201ENST00000509131 295 ntBASIC3.28□□□□□ -1.88
LINC01558Q9Y6Z2 AC002401.2-201ENST00000511361 430 ntTSL 3 BASIC3.28□□□□□ -1.88
LINC01558Q9Y6Z2 AC116345.1-202ENST00000513379 941 ntTSL 5 BASIC3.28□□□□□ -1.88
LINC01558Q9Y6Z2 AC037450.1-201ENST00000518129 647 ntTSL 3 BASIC3.28□□□□□ -1.88
LINC01558Q9Y6Z2 AC087273.2-201ENST00000519038 634 ntTSL 3 BASIC3.28□□□□□ -1.88
LINC01558Q9Y6Z2 COX6C-205ENST00000520468 1098 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
LINC01558Q9Y6Z2 AC104248.1-201ENST00000522244 481 ntTSL 3 BASIC3.28□□□□□ -1.88
LINC01558Q9Y6Z2 COX6C-210ENST00000524245 513 ntAPPRIS P1 TSL 2 BASIC3.28□□□□□ -1.88
LINC01558Q9Y6Z2 NPIPB14P-203ENST00000532298 987 ntBASIC3.28□□□□□ -1.88
LINC01558Q9Y6Z2 AC026894.1-201ENST00000532930 850 ntTSL 3 BASIC3.28□□□□□ -1.88
LINC01558Q9Y6Z2 AC018523.1-201ENST00000534211 512 ntBASIC3.28□□□□□ -1.88
LINC01558Q9Y6Z2 MAGOHB-204ENST00000539554 666 ntTSL 3 BASIC3.28□□□□□ -1.88
LINC01558Q9Y6Z2 AC008250.1-201ENST00000539874 522 ntTSL 3 BASIC3.28□□□□□ -1.88
LINC01558Q9Y6Z2 PPIAL4D-201ENST00000544708 495 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
LINC01558Q9Y6Z2 AL139353.2-201ENST00000549844 699 ntTSL 3 BASIC3.28□□□□□ -1.88
LINC01558Q9Y6Z2 AC137800.1-202ENST00000562098 446 ntBASIC3.28□□□□□ -1.88
LINC01558Q9Y6Z2 AC106785.4-201ENST00000569492 412 ntBASIC3.28□□□□□ -1.88
LINC01558Q9Y6Z2 AC005736.2-201ENST00000571302 774 ntTSL 2 BASIC3.28□□□□□ -1.88
LINC01558Q9Y6Z2 AC012447.1-201ENST00000577914 682 ntTSL 3 BASIC3.28□□□□□ -1.88
LINC01558Q9Y6Z2 AP001021.2-201ENST00000577935 544 ntTSL 5 BASIC3.28□□□□□ -1.88
LINC01558Q9Y6Z2 PPIAL4F-202ENST00000581138 660 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
LINC01558Q9Y6Z2 PPIAL4E-201ENST00000581164 785 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
LINC01558Q9Y6Z2 AC005154.1-225ENST00000581665 564 ntTSL 4 BASIC3.28□□□□□ -1.88
LINC01558Q9Y6Z2 AC011120.1-201ENST00000583916 624 ntTSL 5 BASIC3.28□□□□□ -1.88
LINC01558Q9Y6Z2 RN7SL262P-201ENST00000584590 294 ntBASIC3.28□□□□□ -1.88
LINC01558Q9Y6Z2 ZNF223-202ENST00000585552 541 ntTSL 4 BASIC3.28□□□□□ -1.88
LINC01558Q9Y6Z2 RPARP-AS1-204ENST00000594818 445 ntTSL 3 BASIC3.28□□□□□ -1.88
LINC01558Q9Y6Z2 ZNF738-205ENST00000597810 747 ntAPPRIS ALT2 TSL 3 BASIC3.28□□□□□ -1.88
LINC01558Q9Y6Z2 LSP1P1-201ENST00000599825 133 ntBASIC3.28□□□□□ -1.88
LINC01558Q9Y6Z2 HCG18-247ENST00000602698 573 ntTSL 3 BASIC3.28□□□□□ -1.88
LINC01558Q9Y6Z2 AL117336.3-201ENST00000603160 1107 ntTSL 3 BASIC3.28□□□□□ -1.88
LINC01558Q9Y6Z2 AL162574.1-201ENST00000615702 950 ntBASIC3.28□□□□□ -1.88
LINC01558Q9Y6Z2 NOP16-208ENST00000616685 472 ntTSL 3 BASIC3.28□□□□□ -1.88
LINC01558Q9Y6Z2 EFCAB8-204ENST00000618684 435 ntTSL 5 BASIC3.28□□□□□ -1.88
LINC01558Q9Y6Z2 SNX18P5-201ENST00000619873 868 ntBASIC3.28□□□□□ -1.88
LINC01558Q9Y6Z2 PPP3CB-AS1-215ENST00000620559 656 ntTSL 5 BASIC3.28□□□□□ -1.88
LINC01558Q9Y6Z2 AP001962.1-201ENST00000624114 559 ntBASIC3.28□□□□□ -1.88
LINC01558Q9Y6Z2 AC011840.6-201ENST00000624536 610 ntBASIC3.28□□□□□ -1.88
LINC01558Q9Y6Z2 LYG2-206ENST00000626374 650 ntTSL 5 BASIC3.28□□□□□ -1.88
LINC01558Q9Y6Z2 AL049541.2-201ENST00000626377 555 ntBASIC3.28□□□□□ -1.88
LINC01558Q9Y6Z2 FRG1EP-201ENST00000634469 770 ntBASIC3.28□□□□□ -1.88
LINC01558Q9Y6Z2 AL158175.1-203ENST00000635654 1281 ntTSL 5 BASIC3.28□□□□□ -1.88
LINC01558Q9Y6Z2 MIR3191-201ENST00000636300 76 ntBASIC3.28□□□□□ -1.88
LINC01558Q9Y6Z2 IQSEC2-207ENST00000638583 722 ntTSL 5 BASIC3.28□□□□□ -1.88
LINC01558Q9Y6Z2 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
LINC01558Q9Y6Z2 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
LINC01558Q9Y6Z2 GJA9-202ENST00000360786 1901 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
LINC01558Q9Y6Z2 ZMYM2-202ENST00000382871 5051 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
LINC01558Q9Y6Z2 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC3.28□□□□□ -1.88
LINC01558Q9Y6Z2 EMSY-206ENST00000525038 4376 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
LINC01558Q9Y6Z2 AP001442.1-206ENST00000600590 1573 ntTSL 5 BASIC3.28□□□□□ -1.88
LINC01558Q9Y6Z2 SYNCRIP-204ENST00000616122 6764 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
LINC01558Q9Y6Z2 FAM135A-202ENST00000361499 5042 ntAPPRIS ALT1 TSL 1 (best) BASIC3.28□□□□□ -1.88
LINC01558Q9Y6Z2 RPL7-204ENST00000396467 1526 ntTSL 3 BASIC3.28□□□□□ -1.88
LINC01558Q9Y6Z2 MAPK10-341ENST00000641657 3860 ntAPPRIS P2 BASIC3.28□□□□□ -1.88
LINC01558Q9Y6Z2 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC3.28□□□□□ -1.88
LINC01558Q9Y6Z2 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC3.28□□□□□ -1.88
LINC01558Q9Y6Z2 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
LINC01558Q9Y6Z2 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC3.28□□□□□ -1.88
LINC01558Q9Y6Z2 AC090518.1-201ENST00000562300 1495 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
LINC01558Q9Y6Z2 ANKRD46-204ENST00000519597 2779 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.89
LINC01558Q9Y6Z2 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC3.28□□□□□ -1.89
LINC01558Q9Y6Z2 TMEM99-201ENST00000301665 2058 ntAPPRIS P2 TSL 2 BASIC3.28□□□□□ -1.89
LINC01558Q9Y6Z2 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC3.27□□□□□ -1.89
LINC01558Q9Y6Z2 ZNF329-201ENST00000358067 3290 ntAPPRIS P1 TSL 2 BASIC3.27□□□□□ -1.89
LINC01558Q9Y6Z2 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
LINC01558Q9Y6Z2 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC3.27□□□□□ -1.89
LINC01558Q9Y6Z2 AL161725.1-201ENST00000591577 1351 ntTSL 5 BASIC3.27□□□□□ -1.89
LINC01558Q9Y6Z2 PRLR-201ENST00000231423 1679 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
LINC01558Q9Y6Z2 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC3.27□□□□□ -1.89
LINC01558Q9Y6Z2 LINC02511-201ENST00000505736 1668 ntTSL 5 BASIC3.27□□□□□ -1.89
LINC01558Q9Y6Z2 ELOVL5-201ENST00000304434 2827 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
LINC01558Q9Y6Z2 ACMSD-201ENST00000356140 1321 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
LINC01558Q9Y6Z2 NFIB-221ENST00000637742 2166 ntTSL 5 BASIC3.27□□□□□ -1.89
LINC01558Q9Y6Z2 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
LINC01558Q9Y6Z2 OTC-201ENST00000039007 1585 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
LINC01558Q9Y6Z2 FCGR1B-209ENST00000616817 1584 ntAPPRIS ALT2 TSL 5 BASIC3.27□□□□□ -1.89
LINC01558Q9Y6Z2 OR1I1-201ENST00000209540 1242 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
LINC01558Q9Y6Z2 GZMA-201ENST00000274306 894 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
LINC01558Q9Y6Z2 OR7G3-201ENST00000305444 939 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
LINC01558Q9Y6Z2 PRYP4-201ENST00000306589 444 ntBASIC3.27□□□□□ -1.89
LINC01558Q9Y6Z2 SPINK6-201ENST00000325630 686 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
LINC01558Q9Y6Z2 WFDC11-202ENST00000356562 642 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 69.9 ms