Protein–RNA interactions for Protein: Q9HC56

PCDH9, Protocadherin-9, humanhuman

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9Q9HC56 AL139100.1-201ENST00000408001 498 ntBASIC6.98□□□□□ -1.29
PCDH9Q9HC56 ZNF385D-AS1-201ENST00000412369 705 ntTSL 3 BASIC6.98□□□□□ -1.29
PCDH9Q9HC56 PUDPP2-201ENST00000431423 643 ntBASIC6.98□□□□□ -1.29
PCDH9Q9HC56 AL133465.1-201ENST00000432942 512 ntTSL 3 BASIC6.98□□□□□ -1.29
PCDH9Q9HC56 AL159174.1-201ENST00000438267 811 ntTSL 3 BASIC6.98□□□□□ -1.29
PCDH9Q9HC56 AL445228.1-201ENST00000449525 333 ntTSL 3 BASIC6.98□□□□□ -1.29
PCDH9Q9HC56 AC006026.3-201ENST00000454029 143 ntTSL 3 BASIC6.98□□□□□ -1.29
PCDH9Q9HC56 UCK2-206ENST00000470820 1083 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
PCDH9Q9HC56 RN7SL849P-201ENST00000485236 295 ntBASIC6.98□□□□□ -1.29
PCDH9Q9HC56 AC098487.1-203ENST00000512915 546 ntTSL 5 BASIC6.98□□□□□ -1.29
PCDH9Q9HC56 C5orf58-205ENST00000524171 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC6.98□□□□□ -1.29
PCDH9Q9HC56 AC021820.1-201ENST00000525564 808 ntBASIC6.98□□□□□ -1.29
PCDH9Q9HC56 AC090592.1-202ENST00000533049 568 ntTSL 4 BASIC6.98□□□□□ -1.29
PCDH9Q9HC56 AC069240.2-201ENST00000550242 609 ntBASIC6.98□□□□□ -1.29
PCDH9Q9HC56 AL109628.1-201ENST00000556877 366 ntBASIC6.98□□□□□ -1.29
PCDH9Q9HC56 AL132640.1-201ENST00000559594 619 ntBASIC6.98□□□□□ -1.29
PCDH9Q9HC56 AC015818.3-202ENST00000579603 283 ntTSL 5 BASIC6.98□□□□□ -1.29
PCDH9Q9HC56 ZNF415-218ENST00000599261 601 ntTSL 3 BASIC6.98□□□□□ -1.29
PCDH9Q9HC56 AL953862.2-201ENST00000603089 820 ntBASIC6.98□□□□□ -1.29
PCDH9Q9HC56 AL365259.1-201ENST00000606334 509 ntTSL 5 BASIC6.98□□□□□ -1.29
PCDH9Q9HC56 5S_rRNA.23-201ENST00000612086 102 ntBASIC6.98□□□□□ -1.29
PCDH9Q9HC56 MIR8082-201ENST00000612488 81 ntBASIC6.98□□□□□ -1.29
PCDH9Q9HC56 AC092683.1-202ENST00000620023 754 ntTSL 3 BASIC6.98□□□□□ -1.29
PCDH9Q9HC56 AC159540.2-201ENST00000621110 754 ntTSL 3 BASIC6.98□□□□□ -1.29
PCDH9Q9HC56 AL049541.1-201ENST00000630976 642 ntTSL 2 BASIC6.98□□□□□ -1.29
PCDH9Q9HC56 AC006453.3-201ENST00000635891 377 ntBASIC6.98□□□□□ -1.29
PCDH9Q9HC56 AC140479.4-205ENST00000636339 820 ntBASIC6.98□□□□□ -1.29
PCDH9Q9HC56 AXDND1-214ENST00000617277 3405 ntAPPRIS ALT2 TSL 5 BASIC6.98□□□□□ -1.29
PCDH9Q9HC56 GJB6-205ENST00000636852 1840 ntAPPRIS P1 TSL 4 BASIC6.98□□□□□ -1.29
PCDH9Q9HC56 KYNU-203ENST00000409512 1576 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
PCDH9Q9HC56 IL31RA-202ENST00000354961 2658 ntAPPRIS ALT2 TSL 5 BASIC6.98□□□□□ -1.29
PCDH9Q9HC56 GOLT1B-201ENST00000229314 3227 ntAPPRIS P2 TSL 1 (best) BASIC6.98□□□□□ -1.29
PCDH9Q9HC56 ADH1B-205ENST00000625860 4059 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
PCDH9Q9HC56 ABLIM1-202ENST00000369252 7690 ntTSL 5 BASIC6.98□□□□□ -1.29
PCDH9Q9HC56 DDX6-208ENST00000620157 6152 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
PCDH9Q9HC56 TXNRD1-203ENST00000397736 3832 ntTSL 5 BASIC6.98□□□□□ -1.29
PCDH9Q9HC56 SOX5-205ENST00000451604 4261 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
PCDH9Q9HC56 THADA-207ENST00000405975 6114 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
PCDH9Q9HC56 C2CD6-203ENST00000439802 1639 ntAPPRIS ALT2 TSL 2 BASIC6.98□□□□□ -1.29
PCDH9Q9HC56 AP002370.1-201ENST00000528055 1602 ntBASIC6.98□□□□□ -1.29
PCDH9Q9HC56 TAOK1-202ENST00000536202 4068 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
PCDH9Q9HC56 MAT2B-201ENST00000280969 2226 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
PCDH9Q9HC56 ABLIM1-207ENST00000392955 7408 ntTSL 5 BASIC6.97□□□□□ -1.29
PCDH9Q9HC56 NCOA6-202ENST00000374796 9311 ntAPPRIS P3 TSL 1 (best) BASIC6.97□□□□□ -1.29
PCDH9Q9HC56 IL31RA-201ENST00000297015 2695 ntAPPRIS ALT2 TSL 5 BASIC6.97□□□□□ -1.29
PCDH9Q9HC56 GPR89A-203ENST00000462900 1527 ntTSL 2 BASIC6.97□□□□□ -1.29
PCDH9Q9HC56 AC005618.1-201ENST00000606901 3148 ntBASIC6.97□□□□□ -1.29
PCDH9Q9HC56 ZNF812P-201ENST00000457674 1694 ntBASIC6.97□□□□□ -1.29
PCDH9Q9HC56 AC007012.2-201ENST00000623206 1676 ntBASIC6.97□□□□□ -1.29
PCDH9Q9HC56 DYDC2-201ENST00000256039 1842 ntAPPRIS P3 TSL 2 BASIC6.97□□□□□ -1.29
PCDH9Q9HC56 RAD51B-210ENST00000487270 2596 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
PCDH9Q9HC56 ZNF490-201ENST00000311437 4237 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
PCDH9Q9HC56 GMFG-201ENST00000253054 616 ntTSL 5 BASIC6.97□□□□□ -1.29
PCDH9Q9HC56 SPAG11B-201ENST00000297498 795 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
PCDH9Q9HC56 ANKRD46-201ENST00000335659 2649 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
PCDH9Q9HC56 SNORA70.3-201ENST00000365075 132 ntBASIC6.97□□□□□ -1.29
PCDH9Q9HC56 FABP3-201ENST00000373713 725 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
PCDH9Q9HC56 AL451061.1-201ENST00000407887 862 ntBASIC6.97□□□□□ -1.29
PCDH9Q9HC56 RPL31-202ENST00000409000 641 ntTSL 2 BASIC6.97□□□□□ -1.29
PCDH9Q9HC56 ROR1-AS1-201ENST00000412349 1574 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
PCDH9Q9HC56 AC019130.1-201ENST00000413841 391 ntTSL 2 BASIC6.97□□□□□ -1.29
PCDH9Q9HC56 AL034345.2-202ENST00000416948 830 ntTSL 2 BASIC6.97□□□□□ -1.29
PCDH9Q9HC56 PARP4P1-201ENST00000435945 2337 ntBASIC6.97□□□□□ -1.29
PCDH9Q9HC56 FGF13-AS1-201ENST00000438238 849 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
PCDH9Q9HC56 SEPT7P2-208ENST00000444755 505 ntTSL 3 BASIC6.97□□□□□ -1.29
PCDH9Q9HC56 GOT2P2-201ENST00000450663 1251 ntBASIC6.97□□□□□ -1.29
PCDH9Q9HC56 RPL36AP55-201ENST00000454114 305 ntBASIC6.97□□□□□ -1.29
PCDH9Q9HC56 AL139156.3-201ENST00000454802 394 ntBASIC6.97□□□□□ -1.29
PCDH9Q9HC56 MEF2AP1-201ENST00000454867 863 ntBASIC6.97□□□□□ -1.29
PCDH9Q9HC56 RBMY2EP-202ENST00000456360 940 ntBASIC6.97□□□□□ -1.29
PCDH9Q9HC56 AL096803.1-201ENST00000456921 1021 ntBASIC6.97□□□□□ -1.29
PCDH9Q9HC56 AC099328.2-201ENST00000465347 455 ntTSL 3 BASIC6.97□□□□□ -1.29
PCDH9Q9HC56 PPP1R2P6-201ENST00000478565 588 ntBASIC6.97□□□□□ -1.29
PCDH9Q9HC56 RN7SL868P-201ENST00000485915 303 ntBASIC6.97□□□□□ -1.29
PCDH9Q9HC56 AC010655.2-201ENST00000493710 662 ntTSL 3 BASIC6.97□□□□□ -1.29
PCDH9Q9HC56 RPL23AP80-201ENST00000495605 424 ntBASIC6.97□□□□□ -1.29
PCDH9Q9HC56 SNORA58-201ENST00000505219 137 ntBASIC6.97□□□□□ -1.29
PCDH9Q9HC56 AC114940.1-201ENST00000512162 1265 ntBASIC6.97□□□□□ -1.29
PCDH9Q9HC56 AC113423.2-201ENST00000517582 545 ntTSL 2 BASIC6.97□□□□□ -1.29
PCDH9Q9HC56 INTS9-AS1-201ENST00000520055 548 ntTSL 5 BASIC6.97□□□□□ -1.29
PCDH9Q9HC56 CARSP2-201ENST00000520688 277 ntBASIC6.97□□□□□ -1.29
PCDH9Q9HC56 GRPEL2-AS1-201ENST00000521295 401 ntTSL 3 BASIC6.97□□□□□ -1.29
PCDH9Q9HC56 RACGAP1P-201ENST00000550663 1879 ntBASIC6.97□□□□□ -1.29
PCDH9Q9HC56 FCF1-203ENST00000553615 954 ntTSL 3 BASIC6.97□□□□□ -1.29
PCDH9Q9HC56 LINC01146-206ENST00000556684 361 ntTSL 3 BASIC6.97□□□□□ -1.29
PCDH9Q9HC56 NQO1-205ENST00000561500 891 ntTSL 3 BASIC6.97□□□□□ -1.29
PCDH9Q9HC56 AC008551.1-201ENST00000575612 405 ntTSL 5 BASIC6.97□□□□□ -1.29
PCDH9Q9HC56 AC010761.3-201ENST00000578819 499 ntTSL 3 BASIC6.97□□□□□ -1.29
PCDH9Q9HC56 AC067852.5-201ENST00000589299 310 ntBASIC6.97□□□□□ -1.29
PCDH9Q9HC56 AC010519.1-201ENST00000599924 344 ntTSL 5 BASIC6.97□□□□□ -1.29
PCDH9Q9HC56 AL450990.1-201ENST00000632868 582 ntTSL 4 BASIC6.97□□□□□ -1.29
PCDH9Q9HC56 ZNF585A-201ENST00000292841 8618 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
PCDH9Q9HC56 DTNA-221ENST00000591182 1787 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
PCDH9Q9HC56 CLEC7A-205ENST00000353231 2446 ntAPPRIS P3 TSL 1 (best) BASIC6.97□□□□□ -1.29
PCDH9Q9HC56 CPEB4-202ENST00000334035 6705 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
PCDH9Q9HC56 FOXJ3-209ENST00000545068 5165 ntAPPRIS P3 TSL 5 BASIC6.97□□□□□ -1.29
PCDH9Q9HC56 ARPP21-201ENST00000187397 3433 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
PCDH9Q9HC56 DEUP1-209ENST00000531792 1656 ntTSL 1 (best) BASIC6.96□□□□□ -1.29
PCDH9Q9HC56 TLR1-201ENST00000308979 2849 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.29
PCDH9Q9HC56 AL591848.4-201ENST00000567832 3472 ntBASIC6.96□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 97.8 ms