Protein–RNA interactions for Protein: Q99909

SSX3, Protein SSX3, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3Q99909 AC013562.1-201ENST00000519427 1722 ntTSL 2 BASIC5.9□□□□□ -1.47
SSX3Q99909 RPS6KA6-201ENST00000262752 2547 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
SSX3Q99909 LINC01179-201ENST00000507838 2163 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
SSX3Q99909 CSDE1-205ENST00000438362 4167 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
SSX3Q99909 CYB5B-201ENST00000307892 4286 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
SSX3Q99909 AC125232.1-201ENST00000452554 1408 ntBASIC5.9□□□□□ -1.47
SSX3Q99909 ATG12-202ENST00000500945 1430 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
SSX3Q99909 SPATA6-202ENST00000371843 2297 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
SSX3Q99909 DST-220ENST00000518935 3547 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
SSX3Q99909 PCDH15-202ENST00000361849 7017 ntTSL 5 BASIC5.89□□□□□ -1.47
SSX3Q99909 PCDH15-205ENST00000373957 7032 ntTSL 5 BASIC5.89□□□□□ -1.47
SSX3Q99909 ATF7IP2-204ENST00000396560 3665 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
SSX3Q99909 API5P1-201ENST00000424316 1510 ntBASIC5.89□□□□□ -1.47
SSX3Q99909 MMACHC-203ENST00000616135 1510 ntTSL 2 BASIC5.89□□□□□ -1.47
SSX3Q99909 NOX4-205ENST00000424319 4184 ntTSL 5 BASIC5.89□□□□□ -1.47
SSX3Q99909 LINC01422-201ENST00000434868 6043 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
SSX3Q99909 FHL5-201ENST00000326771 2031 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
SSX3Q99909 SELE-203ENST00000367775 3389 ntTSL 5 BASIC5.89□□□□□ -1.47
SSX3Q99909 NACAP1-201ENST00000419462 1555 ntTSL 2 BASIC5.89□□□□□ -1.47
SSX3Q99909 FSTL5-201ENST00000306100 4831 ntAPPRIS P3 TSL 1 (best) BASIC5.89□□□□□ -1.47
SSX3Q99909 N4BP2L2-IT2-201ENST00000629393 4890 ntBASIC5.89□□□□□ -1.47
SSX3Q99909 TOPORSLP1-201ENST00000467693 2102 ntBASIC5.89□□□□□ -1.47
SSX3Q99909 ZNF816-203ENST00000357666 2697 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
SSX3Q99909 BBOX1-204ENST00000528583 1724 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
SSX3Q99909 LARS-212ENST00000510191 3737 ntTSL 2 BASIC5.89□□□□□ -1.47
SSX3Q99909 ADTRP-201ENST00000229583 891 ntTSL 2 BASIC5.89□□□□□ -1.47
SSX3Q99909 TTR-201ENST00000237014 957 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
SSX3Q99909 TBC1D32-204ENST00000398212 3824 ntAPPRIS P2 TSL 5 BASIC5.89□□□□□ -1.47
SSX3Q99909 RPL24P7-201ENST00000399435 453 ntBASIC5.89□□□□□ -1.47
SSX3Q99909 AL139135.1-201ENST00000412675 209 ntBASIC5.89□□□□□ -1.47
SSX3Q99909 LINC01980-202ENST00000425195 491 ntTSL 3 BASIC5.89□□□□□ -1.47
SSX3Q99909 AC009303.1-201ENST00000426307 352 ntBASIC5.89□□□□□ -1.47
SSX3Q99909 CFAP58-AS1-201ENST00000435434 795 ntTSL 2 BASIC5.89□□□□□ -1.47
SSX3Q99909 AL022157.1-201ENST00000439622 665 ntTSL 2 BASIC5.89□□□□□ -1.47
SSX3Q99909 LINC00483-203ENST00000450727 686 ntTSL 3 BASIC5.89□□□□□ -1.47
SSX3Q99909 AC093799.1-201ENST00000452411 499 ntBASIC5.89□□□□□ -1.47
SSX3Q99909 RN7SL325P-201ENST00000460434 283 ntBASIC5.89□□□□□ -1.47
SSX3Q99909 RPS10P28-201ENST00000480396 498 ntBASIC5.89□□□□□ -1.47
SSX3Q99909 AC109587.1-201ENST00000482368 962 ntTSL 3 BASIC5.89□□□□□ -1.47
SSX3Q99909 AC079594.1-201ENST00000489757 331 ntBASIC5.89□□□□□ -1.47
SSX3Q99909 AC018639.1-201ENST00000492994 442 ntBASIC5.89□□□□□ -1.47
SSX3Q99909 CHCHD2P7-201ENST00000508008 452 ntBASIC5.89□□□□□ -1.47
SSX3Q99909 FBXO16-208ENST00000519471 398 ntTSL 2 BASIC5.89□□□□□ -1.47
SSX3Q99909 AC099805.1-205ENST00000521794 837 ntTSL 2 BASIC5.89□□□□□ -1.47
SSX3Q99909 AC025524.2-202ENST00000523042 535 ntTSL 4 BASIC5.89□□□□□ -1.47
SSX3Q99909 AC104009.1-201ENST00000528009 635 ntTSL 3 BASIC5.89□□□□□ -1.47
SSX3Q99909 OR5M4P-201ENST00000529436 925 ntBASIC5.89□□□□□ -1.47
SSX3Q99909 AP004607.5-201ENST00000532034 217 ntBASIC5.89□□□□□ -1.47
SSX3Q99909 AC022075.2-201ENST00000535911 562 ntTSL 4 BASIC5.89□□□□□ -1.47
SSX3Q99909 LYZ-202ENST00000548839 558 ntTSL 2 BASIC5.89□□□□□ -1.47
SSX3Q99909 LALBA-202ENST00000549817 1243 ntTSL 5 BASIC5.89□□□□□ -1.47
SSX3Q99909 Z93930.3-201ENST00000607919 749 ntBASIC5.89□□□□□ -1.47
SSX3Q99909 AL591686.2-201ENST00000608241 475 ntTSL 4 BASIC5.89□□□□□ -1.47
SSX3Q99909 AC108861.1-201ENST00000611634 585 ntTSL 4 BASIC5.89□□□□□ -1.47
SSX3Q99909 AL161931.1-201ENST00000612768 246 ntBASIC5.89□□□□□ -1.47
SSX3Q99909 AL121809.2-201ENST00000613169 341 ntBASIC5.89□□□□□ -1.47
SSX3Q99909 AC116165.3-201ENST00000614524 400 ntBASIC5.89□□□□□ -1.47
SSX3Q99909 HOTTIP_2.1-201ENST00000616633 376 ntBASIC5.89□□□□□ -1.47
SSX3Q99909 RSU1P2-204ENST00000619977 1240 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
SSX3Q99909 AC244196.1-201ENST00000620569 409 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
SSX3Q99909 LINC01002-204ENST00000631644 473 ntTSL 5 BASIC5.89□□□□□ -1.47
SSX3Q99909 AC243725.1-201ENST00000637164 436 ntBASIC5.89□□□□□ -1.47
SSX3Q99909 CASC19-232ENST00000641480 1244 ntBASIC5.89□□□□□ -1.47
SSX3Q99909 KLHL4-201ENST00000373114 2445 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
SSX3Q99909 MELK-210ENST00000543751 2400 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
SSX3Q99909 AC007993.1-201ENST00000621298 2430 ntBASIC5.89□□□□□ -1.47
SSX3Q99909 ASXL2-203ENST00000435504 12878 ntAPPRIS P5 TSL 5 BASIC5.89□□□□□ -1.47
SSX3Q99909 AJ009632.1-201ENST00000433588 1376 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
SSX3Q99909 NDFIP2-203ENST00000487865 1384 ntTSL 2 BASIC5.89□□□□□ -1.47
SSX3Q99909 TMCO5A-205ENST00000559502 1939 ntAPPRIS ALT2 TSL 2 BASIC5.89□□□□□ -1.47
SSX3Q99909 CCDC125-202ENST00000396496 4198 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
SSX3Q99909 APBB2-230ENST00000543538 6992 ntTSL 5 BASIC5.89□□□□□ -1.47
SSX3Q99909 DNM1L-201ENST00000266481 3101 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
SSX3Q99909 EEF1A1P16-201ENST00000325349 1414 ntBASIC5.89□□□□□ -1.47
SSX3Q99909 AIMP1-202ENST00000394701 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC5.89□□□□□ -1.47
SSX3Q99909 IFI16-204ENST00000368131 2734 ntAPPRIS P3 TSL 1 (best) BASIC5.89□□□□□ -1.47
SSX3Q99909 EYA3-204ENST00000436342 5943 ntTSL 2 BASIC5.89□□□□□ -1.47
SSX3Q99909 CABYR-216ENST00000621648 2226 ntAPPRIS P4 TSL 1 (best) BASIC5.89□□□□□ -1.47
SSX3Q99909 SRFBP1-201ENST00000339397 2855 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
SSX3Q99909 OSBPL9-203ENST00000428468 2893 ntAPPRIS P3 TSL 1 (best) BASIC5.88□□□□□ -1.47
SSX3Q99909 AC079178.2-201ENST00000439323 1624 ntBASIC5.88□□□□□ -1.47
SSX3Q99909 GHR-211ENST00000618088 4491 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
SSX3Q99909 VNN3-202ENST00000367927 1717 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
SSX3Q99909 ZNF101P1-201ENST00000435701 1720 ntBASIC5.88□□□□□ -1.47
SSX3Q99909 PTPRC-209ENST00000442510 5164 ntAPPRIS P4 TSL 1 (best) BASIC5.88□□□□□ -1.47
SSX3Q99909 PAICS-201ENST00000264221 3339 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
SSX3Q99909 RORA-201ENST00000261523 1951 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
SSX3Q99909 ADGRG2-203ENST00000356606 4630 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
SSX3Q99909 OR1L4-201ENST00000259466 936 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
SSX3Q99909 GNG3-201ENST00000294117 882 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
SSX3Q99909 DEFB119-201ENST00000339144 484 ntAPPRIS ALT2 TSL 1 (best) BASIC5.88□□□□□ -1.47
SSX3Q99909 NPM1P14-201ENST00000343743 866 ntBASIC5.88□□□□□ -1.47
SSX3Q99909 RN7SKP186-201ENST00000365371 303 ntBASIC5.88□□□□□ -1.47
SSX3Q99909 MIR27A-201ENST00000385073 78 ntBASIC5.88□□□□□ -1.47
SSX3Q99909 TRBV19-201ENST00000390393 552 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
SSX3Q99909 AC007349.3-201ENST00000415356 872 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
SSX3Q99909 YWHAZP5-201ENST00000419975 730 ntBASIC5.88□□□□□ -1.47
SSX3Q99909 AL158070.1-201ENST00000421614 631 ntTSL 2 BASIC5.88□□□□□ -1.47
SSX3Q99909 AL354794.2-201ENST00000424795 1248 ntBASIC5.88□□□□□ -1.47
SSX3Q99909 AC009362.1-201ENST00000427253 406 ntBASIC5.88□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 119.1 ms