Protein–RNA interactions for Protein: Q96GC9

VMP1, Vacuole membrane protein 1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1Q96GC9 RBBP4P4-201ENST00000398588 1289 ntBASIC6.72□□□□□ -1.33
VMP1Q96GC9 SOD1P1-201ENST00000407803 440 ntBASIC6.72□□□□□ -1.33
VMP1Q96GC9 AL034345.2-202ENST00000416948 830 ntTSL 2 BASIC6.72□□□□□ -1.33
VMP1Q96GC9 AL161742.1-201ENST00000418154 584 ntBASIC6.72□□□□□ -1.33
VMP1Q96GC9 PMS2P3-203ENST00000422064 567 ntTSL 5 BASIC6.72□□□□□ -1.33
VMP1Q96GC9 G6PC2-204ENST00000429379 645 ntTSL 2 BASIC6.72□□□□□ -1.33
VMP1Q96GC9 AL645936.2-201ENST00000430565 928 ntBASIC6.72□□□□□ -1.33
VMP1Q96GC9 AC104698.1-201ENST00000435671 276 ntBASIC6.72□□□□□ -1.33
VMP1Q96GC9 RPL29P7-201ENST00000440227 457 ntBASIC6.72□□□□□ -1.33
VMP1Q96GC9 AC009237.4-201ENST00000441078 238 ntBASIC6.72□□□□□ -1.33
VMP1Q96GC9 AC104162.1-204ENST00000443346 708 ntTSL 3 BASIC6.72□□□□□ -1.33
VMP1Q96GC9 PARD3-AS1-201ENST00000446211 302 ntTSL 2 BASIC6.72□□□□□ -1.33
VMP1Q96GC9 CYCSP44-201ENST00000448560 313 ntBASIC6.72□□□□□ -1.33
VMP1Q96GC9 AC092675.1-203ENST00000454230 538 ntTSL 5 BASIC6.72□□□□□ -1.33
VMP1Q96GC9 PSPC1P2-201ENST00000455130 225 ntBASIC6.72□□□□□ -1.33
VMP1Q96GC9 AC093627.1-201ENST00000465755 877 ntTSL 3 BASIC6.72□□□□□ -1.33
VMP1Q96GC9 MYL6P4-201ENST00000477911 453 ntBASIC6.72□□□□□ -1.33
VMP1Q96GC9 COX6C-209ENST00000523016 745 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
VMP1Q96GC9 OR7E161P-201ENST00000533722 967 ntBASIC6.72□□□□□ -1.33
VMP1Q96GC9 AL031846.1-201ENST00000560933 314 ntBASIC6.72□□□□□ -1.33
VMP1Q96GC9 MIR4301-201ENST00000577203 66 ntBASIC6.72□□□□□ -1.33
VMP1Q96GC9 MIR4470-201ENST00000583453 72 ntBASIC6.72□□□□□ -1.33
VMP1Q96GC9 AC020909.2-201ENST00000595005 626 ntTSL 2 BASIC6.72□□□□□ -1.33
VMP1Q96GC9 PRR13P5-201ENST00000596581 442 ntBASIC6.72□□□□□ -1.33
VMP1Q96GC9 AC009955.2-201ENST00000597288 542 ntBASIC6.72□□□□□ -1.33
VMP1Q96GC9 LSM1P2-201ENST00000604911 322 ntBASIC6.72□□□□□ -1.33
VMP1Q96GC9 AC087633.2-208ENST00000612877 502 ntTSL 5 BASIC6.72□□□□□ -1.33
VMP1Q96GC9 SKIV2L-216ENST00000628157 210 ntTSL 5 BASIC6.72□□□□□ -1.33
VMP1Q96GC9 AC243725.1-201ENST00000637164 436 ntBASIC6.72□□□□□ -1.33
VMP1Q96GC9 SEC62-201ENST00000337002 6568 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
VMP1Q96GC9 SPRY1-201ENST00000339241 2348 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
VMP1Q96GC9 SYTL4-203ENST00000372981 4847 ntTSL 2 BASIC6.72□□□□□ -1.33
VMP1Q96GC9 ZNF229-203ENST00000613197 4835 ntAPPRIS ALT2 TSL 1 (best) BASIC6.72□□□□□ -1.33
VMP1Q96GC9 ATF7IP2-204ENST00000396560 3665 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
VMP1Q96GC9 GRIP1-202ENST00000398016 4888 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
VMP1Q96GC9 BTN3A2-201ENST00000356386 3017 ntAPPRIS P3 TSL 5 BASIC6.71□□□□□ -1.33
VMP1Q96GC9 CPNE4-202ENST00000502818 2120 ntTSL 5 BASIC6.71□□□□□ -1.33
VMP1Q96GC9 AP001284.1-201ENST00000528393 2118 ntBASIC6.71□□□□□ -1.33
VMP1Q96GC9 LRRC36-205ENST00000563189 2104 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
VMP1Q96GC9 SGO1-202ENST00000306698 1531 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
VMP1Q96GC9 SELE-201ENST00000333360 3857 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.33
VMP1Q96GC9 GBA3-206ENST00000610628 2154 ntAPPRIS ALT2 TSL 5 BASIC6.71□□□□□ -1.33
VMP1Q96GC9 POLK-210ENST00000508526 2019 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
VMP1Q96GC9 RAPGEF4-214ENST00000538974 3920 ntTSL 2 BASIC6.71□□□□□ -1.34
VMP1Q96GC9 NUMB-204ENST00000535282 3198 ntAPPRIS ALT1 TSL 5 BASIC6.71□□□□□ -1.34
VMP1Q96GC9 PAK3-202ENST00000360648 2241 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
VMP1Q96GC9 OR5A1-201ENST00000302030 1051 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
VMP1Q96GC9 HYPM-201ENST00000341016 501 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
VMP1Q96GC9 AC074375.1-201ENST00000372993 192 ntBASIC6.71□□□□□ -1.34
VMP1Q96GC9 MYO3A-202ENST00000376301 727 ntTSL 5 BASIC6.71□□□□□ -1.34
VMP1Q96GC9 TRBV25-1-202ENST00000390398 381 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
VMP1Q96GC9 TRAV38-1-201ENST00000390464 353 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
VMP1Q96GC9 AL137058.2-203ENST00000398039 825 ntTSL 3 BASIC6.71□□□□□ -1.34
VMP1Q96GC9 IGBP1-AS2-201ENST00000403371 513 ntTSL 3 BASIC6.71□□□□□ -1.34
VMP1Q96GC9 CNPY1-202ENST00000406197 560 ntTSL 5 BASIC6.71□□□□□ -1.34
VMP1Q96GC9 CYTOR-207ENST00000414584 772 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
VMP1Q96GC9 AP001043.1-203ENST00000415824 407 ntTSL 5 BASIC6.71□□□□□ -1.34
VMP1Q96GC9 CYP4F32P-201ENST00000426492 504 ntBASIC6.71□□□□□ -1.34
VMP1Q96GC9 OSTCP2-201ENST00000437956 444 ntBASIC6.71□□□□□ -1.34
VMP1Q96GC9 AL022157.1-201ENST00000439622 665 ntTSL 2 BASIC6.71□□□□□ -1.34
VMP1Q96GC9 PMS2P9-201ENST00000441237 515 ntBASIC6.71□□□□□ -1.34
VMP1Q96GC9 DBIL5P2-201ENST00000443827 253 ntBASIC6.71□□□□□ -1.34
VMP1Q96GC9 AL158214.1-201ENST00000444423 404 ntBASIC6.71□□□□□ -1.34
VMP1Q96GC9 MTND6P5-201ENST00000448266 512 ntBASIC6.71□□□□□ -1.34
VMP1Q96GC9 LINC00483-203ENST00000450727 686 ntTSL 3 BASIC6.71□□□□□ -1.34
VMP1Q96GC9 BZW1P1-201ENST00000454901 1240 ntBASIC6.71□□□□□ -1.34
VMP1Q96GC9 MRPS33-203ENST00000467334 622 ntTSL 2 BASIC6.71□□□□□ -1.34
VMP1Q96GC9 RN7SL306P-201ENST00000492941 296 ntBASIC6.71□□□□□ -1.34
VMP1Q96GC9 SMR3B-202ENST00000504825 489 ntAPPRIS P1 TSL 3 BASIC6.71□□□□□ -1.34
VMP1Q96GC9 AC073648.3-201ENST00000504939 925 ntBASIC6.71□□□□□ -1.34
VMP1Q96GC9 NACAP6-201ENST00000509572 622 ntBASIC6.71□□□□□ -1.34
VMP1Q96GC9 IGHVIII-26-1-201ENST00000520387 250 ntBASIC6.71□□□□□ -1.34
VMP1Q96GC9 AC087664.2-202ENST00000521274 515 ntTSL 3 BASIC6.71□□□□□ -1.34
VMP1Q96GC9 AC091819.2-201ENST00000522292 490 ntTSL 3 BASIC6.71□□□□□ -1.34
VMP1Q96GC9 ST13P6-201ENST00000522430 1102 ntBASIC6.71□□□□□ -1.34
VMP1Q96GC9 AC019209.3-201ENST00000536949 772 ntTSL 3 BASIC6.71□□□□□ -1.34
VMP1Q96GC9 NPM1P5-201ENST00000557228 838 ntBASIC6.71□□□□□ -1.34
VMP1Q96GC9 FAM30C-201ENST00000561158 410 ntBASIC6.71□□□□□ -1.34
VMP1Q96GC9 EEF1B2P1-201ENST00000567221 672 ntBASIC6.71□□□□□ -1.34
VMP1Q96GC9 STRADA-207ENST00000578008 1153 ntTSL 5 BASIC6.71□□□□□ -1.34
VMP1Q96GC9 Z98949.1-210ENST00000597548 766 ntTSL 5 BASIC6.71□□□□□ -1.34
VMP1Q96GC9 MIR4435-2HG-219ENST00000609220 883 ntTSL 3 BASIC6.71□□□□□ -1.34
VMP1Q96GC9 EAPP-205ENST00000618169 1237 ntTSL 5 BASIC6.71□□□□□ -1.34
VMP1Q96GC9 AC016542.3-201ENST00000623520 619 ntBASIC6.71□□□□□ -1.34
VMP1Q96GC9 ZRANB2-AS2-220ENST00000623721 1133 ntTSL 5 BASIC6.71□□□□□ -1.34
VMP1Q96GC9 LINC01440-208ENST00000627300 699 ntTSL 5 BASIC6.71□□□□□ -1.34
VMP1Q96GC9 AL049541.1-201ENST00000630976 642 ntTSL 2 BASIC6.71□□□□□ -1.34
VMP1Q96GC9 N4BP2-201ENST00000261435 9744 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.34
VMP1Q96GC9 MYO3B-203ENST00000409044 5448 ntAPPRIS ALT2 TSL 1 (best) BASIC6.71□□□□□ -1.34
VMP1Q96GC9 TEAD1-203ENST00000526600 8477 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
VMP1Q96GC9 RDH11-203ENST00000553384 1926 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
VMP1Q96GC9 RAPH1-204ENST00000418114 1794 ntAPPRIS ALT2 TSL 5 BASIC6.71□□□□□ -1.34
VMP1Q96GC9 RAPH1-205ENST00000419464 1779 ntAPPRIS ALT2 TSL 5 BASIC6.71□□□□□ -1.34
VMP1Q96GC9 AC093909.5-201ENST00000621839 1799 ntBASIC6.71□□□□□ -1.34
VMP1Q96GC9 ELOVL5-203ENST00000370918 3081 ntTSL 2 BASIC6.71□□□□□ -1.34
VMP1Q96GC9 CDY7P-201ENST00000429883 1604 ntBASIC6.71□□□□□ -1.34
VMP1Q96GC9 PCLO-203ENST00000423517 17147 ntTSL 5 BASIC6.71□□□□□ -1.34
VMP1Q96GC9 TXNRD1-205ENST00000503506 3930 ntAPPRIS P2 TSL 1 (best) BASIC6.71□□□□□ -1.34
VMP1Q96GC9 CNTNAP4-209ENST00000622250 3783 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
VMP1Q96GC9 PBX1-221ENST00000612123 6062 ntTSL 5 BASIC6.71□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 116.5 ms