Protein–RNA interactions for Protein: Q96AA3

RFT1, Protein RFT1 homolog, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFT1Q96AA3 SFR1-201ENST00000369727 1438 ntAPPRIS P4 TSL 2 BASIC6.04□□□□□ -1.44
RFT1Q96AA3 HYKK-205ENST00000566332 1422 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
RFT1Q96AA3 TBC1D32-201ENST00000275159 4431 ntAPPRIS ALT2 TSL 5 BASIC6.04□□□□□ -1.44
RFT1Q96AA3 ZMAT1-206ENST00000540921 3139 ntAPPRIS P1 TSL 2 BASIC6.04□□□□□ -1.44
RFT1Q96AA3 RPGRIP1-201ENST00000382933 2004 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
RFT1Q96AA3 IMPG1-201ENST00000369950 3558 ntAPPRIS P3 TSL 1 (best) BASIC6.04□□□□□ -1.44
RFT1Q96AA3 KLHL41-201ENST00000284669 2464 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
RFT1Q96AA3 KIAA0232-201ENST00000307659 7841 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
RFT1Q96AA3 LINC01991-202ENST00000446091 1524 ntTSL 2 BASIC6.04□□□□□ -1.44
RFT1Q96AA3 TMEM200A-202ENST00000392429 5017 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
RFT1Q96AA3 ZMYND11-216ENST00000602682 1687 ntTSL 5 BASIC6.04□□□□□ -1.44
RFT1Q96AA3 AL451064.2-201ENST00000623514 1654 ntBASIC6.04□□□□□ -1.44
RFT1Q96AA3 FTO-215ENST00000636491 1676 ntTSL 5 BASIC6.04□□□□□ -1.44
RFT1Q96AA3 RASGRF1-201ENST00000394745 2850 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
RFT1Q96AA3 LRRC37B-202ENST00000341671 3025 ntAPPRIS P3 TSL 1 (best) BASIC6.04□□□□□ -1.44
RFT1Q96AA3 PAICS-201ENST00000264221 3339 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
RFT1Q96AA3 ZHX3-205ENST00000432768 3551 ntAPPRIS P1 TSL 2 BASIC6.03□□□□□ -1.44
RFT1Q96AA3 RYR2-201ENST00000360064 14850 ntAPPRIS ALT2 TSL 5 BASIC6.03□□□□□ -1.44
RFT1Q96AA3 AMY1A-201ENST00000370083 1790 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
RFT1Q96AA3 MFSD8-256ENST00000641949 1640 ntBASIC6.03□□□□□ -1.44
RFT1Q96AA3 GCNT2-201ENST00000265012 4214 ntAPPRIS P3 TSL 1 (best) BASIC6.03□□□□□ -1.44
RFT1Q96AA3 AIG1-209ENST00000629020 3636 ntTSL 2 BASIC6.03□□□□□ -1.44
RFT1Q96AA3 AASDH-203ENST00000502617 3004 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
RFT1Q96AA3 AL731556.1-201ENST00000394628 3711 ntBASIC6.03□□□□□ -1.44
RFT1Q96AA3 LINC01011-204ENST00000605901 1573 ntTSL 2 BASIC6.03□□□□□ -1.44
RFT1Q96AA3 ZNF283-203ENST00000588797 2428 ntTSL 2 BASIC6.03□□□□□ -1.44
RFT1Q96AA3 C16orf62-202ENST00000417362 3115 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
RFT1Q96AA3 TAS2R7-201ENST00000240687 1096 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
RFT1Q96AA3 SCGB1A1-201ENST00000278282 441 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
RFT1Q96AA3 CTSL3P-201ENST00000354530 657 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
RFT1Q96AA3 RAET1G-201ENST00000367360 1107 ntAPPRIS P2 TSL 1 (best) BASIC6.03□□□□□ -1.44
RFT1Q96AA3 TRAV19-201ENST00000390447 467 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
RFT1Q96AA3 TRAV35-201ENST00000390462 330 ntBASIC6.03□□□□□ -1.44
RFT1Q96AA3 AP003170.5-201ENST00000397185 335 ntBASIC6.03□□□□□ -1.44
RFT1Q96AA3 AC023469.1-201ENST00000409243 469 ntTSL 3 BASIC6.03□□□□□ -1.44
RFT1Q96AA3 AL121917.1-202ENST00000424434 367 ntTSL 3 BASIC6.03□□□□□ -1.44
RFT1Q96AA3 AC244033.1-201ENST00000426826 870 ntBASIC6.03□□□□□ -1.44
RFT1Q96AA3 AL133465.1-201ENST00000432942 512 ntTSL 3 BASIC6.03□□□□□ -1.44
RFT1Q96AA3 HBG2-204ENST00000444587 307 ntTSL 2 BASIC6.03□□□□□ -1.44
RFT1Q96AA3 OR51P1P-201ENST00000447547 942 ntBASIC6.03□□□□□ -1.44
RFT1Q96AA3 BIRC6-AS1-201ENST00000455572 697 ntTSL 3 BASIC6.03□□□□□ -1.44
RFT1Q96AA3 SNORA81.1-201ENST00000458922 177 ntBASIC6.03□□□□□ -1.44
RFT1Q96AA3 CFLAR-223ENST00000479953 1230 ntTSL 2 BASIC6.03□□□□□ -1.44
RFT1Q96AA3 RN7SL647P-201ENST00000485429 300 ntBASIC6.03□□□□□ -1.44
RFT1Q96AA3 MTCO1P55-201ENST00000489829 745 ntBASIC6.03□□□□□ -1.44
RFT1Q96AA3 AP002026.1-204ENST00000506454 749 ntTSL 3 BASIC6.03□□□□□ -1.44
RFT1Q96AA3 AC008417.1-201ENST00000510014 565 ntBASIC6.03□□□□□ -1.44
RFT1Q96AA3 AC011352.2-201ENST00000514574 1016 ntBASIC6.03□□□□□ -1.44
RFT1Q96AA3 EIF5AL1-201ENST00000520547 3840 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
RFT1Q96AA3 OR4A13P-201ENST00000529316 942 ntBASIC6.03□□□□□ -1.44
RFT1Q96AA3 ATP5J2P4-201ENST00000538774 267 ntBASIC6.03□□□□□ -1.44
RFT1Q96AA3 KLRD1-210ENST00000543777 789 ntAPPRIS ALT2 TSL 1 (best) BASIC6.03□□□□□ -1.44
RFT1Q96AA3 AC090673.2-201ENST00000544279 454 ntTSL 3 BASIC6.03□□□□□ -1.44
RFT1Q96AA3 AC005832.1-201ENST00000544380 572 ntTSL 4 BASIC6.03□□□□□ -1.44
RFT1Q96AA3 AC138123.2-204ENST00000547432 721 ntTSL 3 BASIC6.03□□□□□ -1.44
RFT1Q96AA3 AL136298.1-202ENST00000556520 518 ntTSL 3 BASIC6.03□□□□□ -1.44
RFT1Q96AA3 AC027801.5-201ENST00000574365 416 ntTSL 3 BASIC6.03□□□□□ -1.44
RFT1Q96AA3 AC091178.1-204ENST00000577328 366 ntTSL 4 BASIC6.03□□□□□ -1.44
RFT1Q96AA3 MIR4262-201ENST00000578394 54 ntBASIC6.03□□□□□ -1.44
RFT1Q96AA3 AC115989.2-201ENST00000578640 563 ntBASIC6.03□□□□□ -1.44
RFT1Q96AA3 AC008770.4-201ENST00000586394 468 ntTSL 3 BASIC6.03□□□□□ -1.44
RFT1Q96AA3 AL359704.2-201ENST00000604335 521 ntBASIC6.03□□□□□ -1.44
RFT1Q96AA3 IFNA5-201ENST00000610521 987 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
RFT1Q96AA3 AP000550.3-201ENST00000637734 379 ntBASIC6.03□□□□□ -1.44
RFT1Q96AA3 ADH4-212ENST00000629236 1974 ntTSL 5 BASIC6.03□□□□□ -1.44
RFT1Q96AA3 SRSF3-202ENST00000373715 4222 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
RFT1Q96AA3 GOLT1B-201ENST00000229314 3227 ntAPPRIS P2 TSL 1 (best) BASIC6.03□□□□□ -1.44
RFT1Q96AA3 NBPF9-203ENST00000610300 2930 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
RFT1Q96AA3 RAB9B-201ENST00000243298 3748 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
RFT1Q96AA3 LINC01537-201ENST00000450804 2450 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
RFT1Q96AA3 OSBPL9-203ENST00000428468 2893 ntAPPRIS P3 TSL 1 (best) BASIC6.03□□□□□ -1.44
RFT1Q96AA3 TAF7L-203ENST00000372907 2341 ntAPPRIS P3 TSL 1 (best) BASIC6.03□□□□□ -1.44
RFT1Q96AA3 ASTN2-AS1-201ENST00000418250 1756 ntTSL 2 BASIC6.03□□□□□ -1.44
RFT1Q96AA3 IBTK-210ENST00000610980 5195 ntTSL 5 BASIC6.03□□□□□ -1.44
RFT1Q96AA3 SCN1A-217ENST00000637988 8562 ntAPPRIS P3 TSL 5 BASIC6.03□□□□□ -1.44
RFT1Q96AA3 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
RFT1Q96AA3 LINC00616-205ENST00000514600 2017 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
RFT1Q96AA3 KIAA2012-204ENST00000498697 3772 ntAPPRIS ALT2 TSL 5 BASIC6.03□□□□□ -1.44
RFT1Q96AA3 PHYHIPL-201ENST00000373878 3569 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
RFT1Q96AA3 SOX5-216ENST00000546136 6975 ntAPPRIS P3 TSL 5 BASIC6.02□□□□□ -1.45
RFT1Q96AA3 RGS5-215ENST00000439699 1441 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
RFT1Q96AA3 AC027279.1-201ENST00000568885 4284 ntBASIC6.02□□□□□ -1.45
RFT1Q96AA3 LPAR6-201ENST00000345941 2428 ntAPPRIS P1 TSL 2 BASIC6.02□□□□□ -1.45
RFT1Q96AA3 ATP6V0E1-201ENST00000265093 773 ntTSL 2 BASIC6.02□□□□□ -1.45
RFT1Q96AA3 RNA5SP301-201ENST00000362537 121 ntBASIC6.02□□□□□ -1.45
RFT1Q96AA3 C1QTNF9B-203ENST00000382145 888 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
RFT1Q96AA3 MIR128-2-201ENST00000384893 84 ntBASIC6.02□□□□□ -1.45
RFT1Q96AA3 MGST1-205ENST00000396210 914 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
RFT1Q96AA3 RN7SKP85-201ENST00000411349 318 ntBASIC6.02□□□□□ -1.45
RFT1Q96AA3 AC087380.1-202ENST00000415970 1163 ntTSL 2 BASIC6.02□□□□□ -1.45
RFT1Q96AA3 AC008758.2-201ENST00000420038 695 ntTSL 2 BASIC6.02□□□□□ -1.45
RFT1Q96AA3 AL158070.1-201ENST00000421614 631 ntTSL 2 BASIC6.02□□□□□ -1.45
RFT1Q96AA3 TMEM246-AS1-202ENST00000425734 466 ntTSL 2 BASIC6.02□□□□□ -1.45
RFT1Q96AA3 AL604028.1-201ENST00000430643 598 ntTSL 2 BASIC6.02□□□□□ -1.45
RFT1Q96AA3 AL035420.1-202ENST00000450129 357 ntTSL 3 BASIC6.02□□□□□ -1.45
RFT1Q96AA3 AL356309.2-201ENST00000454034 719 ntTSL 5 BASIC6.02□□□□□ -1.45
RFT1Q96AA3 TAAR3P-201ENST00000466706 1078 ntBASIC6.02□□□□□ -1.45
RFT1Q96AA3 RN7SL228P-201ENST00000470060 303 ntBASIC6.02□□□□□ -1.45
RFT1Q96AA3 RPL7AP56-201ENST00000476420 791 ntBASIC6.02□□□□□ -1.45
RFT1Q96AA3 TAAR3P-202ENST00000481759 1025 ntBASIC6.02□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 348.5 ms