Protein–RNA interactions for Protein: Q29RF7

PDS5A, Sister chromatid cohesion protein PDS5 homolog A, humanhuman

Known RBP Predictions only

Length 1,337 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDS5AQ29RF7 SNX24-205ENST00000506996 588 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
PDS5AQ29RF7 AC084855.1-201ENST00000528696 572 ntTSL 2 BASIC8.03□□□□□ -1.12
PDS5AQ29RF7 AP002498.1-201ENST00000530190 568 ntTSL 3 BASIC8.03□□□□□ -1.12
PDS5AQ29RF7 OR52K3P-201ENST00000531655 943 ntBASIC8.03□□□□□ -1.12
PDS5AQ29RF7 OR4A41P-201ENST00000533053 928 ntBASIC8.03□□□□□ -1.12
PDS5AQ29RF7 AC022509.1-202ENST00000537525 494 ntTSL 4 BASIC8.03□□□□□ -1.12
PDS5AQ29RF7 AC023310.2-201ENST00000553844 547 ntBASIC8.03□□□□□ -1.12
PDS5AQ29RF7 AL589743.6-201ENST00000611025 117 ntBASIC8.03□□□□□ -1.12
PDS5AQ29RF7 SMR3B-204ENST00000614072 783 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
PDS5AQ29RF7 AC012676.3-201ENST00000614983 479 ntBASIC8.03□□□□□ -1.12
PDS5AQ29RF7 5S_rRNA.29-201ENST00000641250 107 ntBASIC8.03□□□□□ -1.12
PDS5AQ29RF7 ZHX3-205ENST00000432768 3551 ntAPPRIS P1 TSL 2 BASIC8.03□□□□□ -1.12
PDS5AQ29RF7 STAG1-202ENST00000383202 6055 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
PDS5AQ29RF7 LTA4H-209ENST00000552789 2025 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
PDS5AQ29RF7 SLC4A4-204ENST00000425175 7596 ntTSL 5 BASIC8.03□□□□□ -1.12
PDS5AQ29RF7 FAM20A-207ENST00000619787 2798 ntTSL 5 BASIC8.03□□□□□ -1.12
PDS5AQ29RF7 POGK-201ENST00000367875 6254 ntAPPRIS P1 TSL 5 BASIC8.03□□□□□ -1.12
PDS5AQ29RF7 ENO1P4-201ENST00000416471 1785 ntBASIC8.03□□□□□ -1.12
PDS5AQ29RF7 SYTL5-202ENST00000456733 4704 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
PDS5AQ29RF7 MAVS-202ENST00000428216 11714 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
PDS5AQ29RF7 DDX18-201ENST00000263239 3796 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
PDS5AQ29RF7 AC138915.4-201ENST00000565549 4147 ntBASIC8.03□□□□□ -1.12
PDS5AQ29RF7 ZNF407-203ENST00000577538 5794 ntAPPRIS ALT2 TSL 2 BASIC8.03□□□□□ -1.12
PDS5AQ29RF7 CDK19-203ENST00000413605 6007 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
PDS5AQ29RF7 ZNF160-208ENST00000599056 4229 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
PDS5AQ29RF7 NCOA4P3-201ENST00000513203 1877 ntBASIC8.03□□□□□ -1.12
PDS5AQ29RF7 AL035530.2-201ENST00000607391 1675 ntTSL 3 BASIC8.03□□□□□ -1.12
PDS5AQ29RF7 BROX-201ENST00000340934 4124 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
PDS5AQ29RF7 RASGRF1-201ENST00000394745 2850 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
PDS5AQ29RF7 AC096582.3-201ENST00000636578 3716 ntAPPRIS P1 TSL 5 BASIC8.03□□□□□ -1.12
PDS5AQ29RF7 AP005139.1-201ENST00000580702 1647 ntBASIC8.03□□□□□ -1.12
PDS5AQ29RF7 ASNSP6-201ENST00000592770 1618 ntBASIC8.03□□□□□ -1.12
PDS5AQ29RF7 MAK-205ENST00000538030 2459 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
PDS5AQ29RF7 OR51J1-201ENST00000332043 951 ntAPPRIS P1 BASIC8.03□□□□□ -1.12
PDS5AQ29RF7 VTRNA3-1P-201ENST00000362552 102 ntBASIC8.03□□□□□ -1.12
PDS5AQ29RF7 AC245036.1-201ENST00000391727 309 ntBASIC8.03□□□□□ -1.12
PDS5AQ29RF7 PDE11A-203ENST00000409504 2102 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
PDS5AQ29RF7 BX284668.3-201ENST00000414128 882 ntTSL 5 BASIC8.03□□□□□ -1.12
PDS5AQ29RF7 AC233728.1-201ENST00000418049 218 ntTSL 5 BASIC8.03□□□□□ -1.12
PDS5AQ29RF7 IGKV1OR10-1-201ENST00000442306 329 ntBASIC8.03□□□□□ -1.12
PDS5AQ29RF7 AC017006.2-201ENST00000444077 464 ntTSL 5 BASIC8.03□□□□□ -1.12
PDS5AQ29RF7 LAMTOR5-AS1-201ENST00000444238 881 ntTSL 5 BASIC8.03□□□□□ -1.12
PDS5AQ29RF7 LINC01789-202ENST00000455614 491 ntTSL 3 BASIC8.03□□□□□ -1.12
PDS5AQ29RF7 IGKV1OR22-5-201ENST00000458718 354 ntBASIC8.03□□□□□ -1.12
PDS5AQ29RF7 AC106822.1-201ENST00000502647 526 ntBASIC8.03□□□□□ -1.12
PDS5AQ29RF7 AC020980.1-201ENST00000513041 458 ntTSL 5 BASIC8.03□□□□□ -1.12
PDS5AQ29RF7 AP003438.1-201ENST00000518704 435 ntTSL 3 BASIC8.03□□□□□ -1.12
PDS5AQ29RF7 TBCA-209ENST00000522370 435 ntTSL 3 BASIC8.03□□□□□ -1.12
PDS5AQ29RF7 AC092375.1-201ENST00000550410 637 ntBASIC8.03□□□□□ -1.12
PDS5AQ29RF7 APAF1-211ENST00000552268 1143 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
PDS5AQ29RF7 AC244034.2-201ENST00000562504 509 ntBASIC8.03□□□□□ -1.12
PDS5AQ29RF7 AC011120.1-201ENST00000583916 624 ntTSL 5 BASIC8.03□□□□□ -1.12
PDS5AQ29RF7 AC026898.1-201ENST00000586404 571 ntBASIC8.03□□□□□ -1.12
PDS5AQ29RF7 AC007786.1-202ENST00000590607 443 ntTSL 3 BASIC8.03□□□□□ -1.12
PDS5AQ29RF7 AL589935.1-201ENST00000602418 488 ntTSL 4 BASIC8.03□□□□□ -1.12
PDS5AQ29RF7 AC019257.2-201ENST00000605539 497 ntBASIC8.03□□□□□ -1.12
PDS5AQ29RF7 uc_338.29-201ENST00000615099 168 ntBASIC8.03□□□□□ -1.12
PDS5AQ29RF7 Metazoa_SRP.66-201ENST00000615609 282 ntBASIC8.03□□□□□ -1.12
PDS5AQ29RF7 AC005277.2-201ENST00000617898 390 ntBASIC8.03□□□□□ -1.12
PDS5AQ29RF7 AC073488.9-201ENST00000631601 754 ntBASIC8.03□□□□□ -1.12
PDS5AQ29RF7 RAB14-201ENST00000373840 4145 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.12
PDS5AQ29RF7 VTI1A-201ENST00000393077 4131 ntAPPRIS P1 TSL 2 BASIC8.02□□□□□ -1.12
PDS5AQ29RF7 CASP5-201ENST00000260315 1414 ntTSL 5 BASIC8.02□□□□□ -1.12
PDS5AQ29RF7 VTCN1-207ENST00000539893 2719 ntTSL 2 BASIC8.02□□□□□ -1.13
PDS5AQ29RF7 TNRC6A-201ENST00000315183 8303 ntAPPRIS ALT2 TSL 5 BASIC8.02□□□□□ -1.13
PDS5AQ29RF7 PLEKHS1-203ENST00000369309 2534 ntTSL 5 BASIC8.02□□□□□ -1.13
PDS5AQ29RF7 LEO1-201ENST00000299601 2193 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
PDS5AQ29RF7 LINC01991-202ENST00000446091 1524 ntTSL 2 BASIC8.02□□□□□ -1.13
PDS5AQ29RF7 OR51M1-203ENST00000642046 4092 ntAPPRIS P1 BASIC8.02□□□□□ -1.13
PDS5AQ29RF7 BMX-201ENST00000342014 2499 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
PDS5AQ29RF7 BABAM2-201ENST00000342045 1681 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
PDS5AQ29RF7 BABAM2-203ENST00000361704 1686 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
PDS5AQ29RF7 CNTRL-207ENST00000373855 7660 ntAPPRIS P1 TSL 5 BASIC8.02□□□□□ -1.13
PDS5AQ29RF7 CDH12-201ENST00000382254 4164 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
PDS5AQ29RF7 ASB4-202ENST00000325885 3825 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
PDS5AQ29RF7 TMBIM6-202ENST00000395006 2598 ntAPPRIS P3 TSL 1 (best) BASIC8.02□□□□□ -1.13
PDS5AQ29RF7 NEUROD4-201ENST00000242994 3953 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
PDS5AQ29RF7 DIAPH3-206ENST00000465066 2735 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
PDS5AQ29RF7 ZNF260-202ENST00000523638 5666 ntAPPRIS P1 TSL 2 BASIC8.02□□□□□ -1.13
PDS5AQ29RF7 AC087392.3-202ENST00000358446 1754 ntBASIC8.02□□□□□ -1.13
PDS5AQ29RF7 PIGN-238ENST00000639758 4239 ntTSL 5 BASIC8.02□□□□□ -1.13
PDS5AQ29RF7 MDM4-205ENST00000391947 10008 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
PDS5AQ29RF7 ARGFX-201ENST00000334384 992 ntAPPRIS P1 TSL 3 BASIC8.02□□□□□ -1.13
PDS5AQ29RF7 AC107977.1-201ENST00000355745 939 ntBASIC8.02□□□□□ -1.13
PDS5AQ29RF7 PSMD10-206ENST00000372296 878 ntTSL 5 BASIC8.02□□□□□ -1.13
PDS5AQ29RF7 PRELID1P1-201ENST00000403549 660 ntBASIC8.02□□□□□ -1.13
PDS5AQ29RF7 SULT1C2-204ENST00000409880 1206 ntTSL 3 BASIC8.02□□□□□ -1.13
PDS5AQ29RF7 AL360013.1-201ENST00000419031 858 ntBASIC8.02□□□□□ -1.13
PDS5AQ29RF7 AKR1B10P1-201ENST00000425765 942 ntBASIC8.02□□□□□ -1.13
PDS5AQ29RF7 OFD1P10Y-201ENST00000434110 1433 ntBASIC8.02□□□□□ -1.13
PDS5AQ29RF7 AL512785.1-201ENST00000447899 517 ntTSL 3 BASIC8.02□□□□□ -1.13
PDS5AQ29RF7 TVP23CP1-201ENST00000450317 639 ntBASIC8.02□□□□□ -1.13
PDS5AQ29RF7 RN7SL834P-201ENST00000461450 286 ntBASIC8.02□□□□□ -1.13
PDS5AQ29RF7 OR9A1P-202ENST00000484361 945 ntBASIC8.02□□□□□ -1.13
PDS5AQ29RF7 AGK-205ENST00000492693 1046 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
PDS5AQ29RF7 AC018645.1-201ENST00000505003 109 ntBASIC8.02□□□□□ -1.13
PDS5AQ29RF7 AC008429.2-201ENST00000523057 864 ntBASIC8.02□□□□□ -1.13
PDS5AQ29RF7 AL133399.1-201ENST00000527476 298 ntBASIC8.02□□□□□ -1.13
PDS5AQ29RF7 WDR93-204ENST00000558000 1886 ntAPPRIS ALT2 TSL 1 (best) BASIC8.02□□□□□ -1.13
PDS5AQ29RF7 RORA-AS2-202ENST00000561413 576 ntTSL 4 BASIC8.02□□□□□ -1.13
Retrieved 100 of 98,524 protein–RNA pairs in 74.1 ms