Protein–RNA interactions for Protein: P84243

H3F3A, Histone H3.3, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3AP84243 AC138123.2-201ENST00000550324 579 ntTSL 3 BASIC6.07□□□□□ -1.44
H3F3AP84243 AC092375.1-201ENST00000550410 637 ntBASIC6.07□□□□□ -1.44
H3F3AP84243 CBX5-204ENST00000550411 894 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
H3F3AP84243 OR11H12-201ENST00000550708 1085 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
H3F3AP84243 AC022469.1-201ENST00000555291 656 ntTSL 3 BASIC6.07□□□□□ -1.44
H3F3AP84243 CNIH1-205ENST00000556113 523 ntAPPRIS ALT1 TSL 2 BASIC6.07□□□□□ -1.44
H3F3AP84243 AC018558.5-201ENST00000565840 952 ntBASIC6.07□□□□□ -1.44
H3F3AP84243 AC068152.1-203ENST00000570314 254 ntTSL 3 BASIC6.07□□□□□ -1.44
H3F3AP84243 AC005546.1-201ENST00000591837 391 ntTSL 3 BASIC6.07□□□□□ -1.44
H3F3AP84243 AC008764.3-201ENST00000597357 432 ntTSL 5 BASIC6.07□□□□□ -1.44
H3F3AP84243 Z93930.3-201ENST00000607919 749 ntBASIC6.07□□□□□ -1.44
H3F3AP84243 AL121830.1-206ENST00000608476 1254 ntTSL 5 BASIC6.07□□□□□ -1.44
H3F3AP84243 MIR6883-201ENST00000614952 78 ntBASIC6.07□□□□□ -1.44
H3F3AP84243 AC010333.3-201ENST00000615100 402 ntBASIC6.07□□□□□ -1.44
H3F3AP84243 OR1N1-202ENST00000619659 939 ntBASIC6.07□□□□□ -1.44
H3F3AP84243 Metazoa_SRP.129-201ENST00000619776 251 ntBASIC6.07□□□□□ -1.44
H3F3AP84243 DAPL1-204ENST00000621326 671 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
H3F3AP84243 AC091059.2-201ENST00000623355 614 ntBASIC6.07□□□□□ -1.44
H3F3AP84243 ZNF806-201ENST00000438300 1774 ntBASIC6.07□□□□□ -1.44
H3F3AP84243 BCL2L14-201ENST00000266434 2039 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
H3F3AP84243 FOXP1-212ENST00000491238 2250 ntTSL 2 BASIC6.07□□□□□ -1.44
H3F3AP84243 CYP51A1-204ENST00000450723 1729 ntTSL 2 BASIC6.07□□□□□ -1.44
H3F3AP84243 CYP2G2P-201ENST00000594920 1485 ntBASIC6.07□□□□□ -1.44
H3F3AP84243 IGF2R-201ENST00000356956 14044 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
H3F3AP84243 GIGYF2-246ENST00000629305 7878 ntTSL 5 BASIC6.07□□□□□ -1.44
H3F3AP84243 RPTN-201ENST00000316073 3569 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
H3F3AP84243 ZNF562-202ENST00000453372 2111 ntAPPRIS P3 TSL 3 BASIC6.07□□□□□ -1.44
H3F3AP84243 RACGAP1P-201ENST00000550663 1879 ntBASIC6.07□□□□□ -1.44
H3F3AP84243 AL669831.5-218ENST00000591702 1873 ntBASIC6.07□□□□□ -1.44
H3F3AP84243 CACNA1E-204ENST00000367567 14757 ntAPPRIS ALT2 TSL 5 BASIC6.06□□□□□ -1.44
H3F3AP84243 ZNF19-206ENST00000565100 2087 ntTSL 5 BASIC6.06□□□□□ -1.44
H3F3AP84243 USP37-201ENST00000258399 8032 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
H3F3AP84243 KLHL5-201ENST00000261425 3425 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
H3F3AP84243 APOL6-201ENST00000409652 10121 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
H3F3AP84243 DMXL1-215ENST00000539542 11236 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
H3F3AP84243 DZIP3-201ENST00000361582 5350 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
H3F3AP84243 NUMB-203ENST00000359560 3309 ntAPPRIS P3 TSL 5 BASIC6.06□□□□□ -1.44
H3F3AP84243 AL512353.3-201ENST00000417517 1326 ntBASIC6.06□□□□□ -1.44
H3F3AP84243 VN2R1P-201ENST00000449668 1743 ntBASIC6.06□□□□□ -1.44
H3F3AP84243 AC244100.3-202ENST00000617328 1721 ntTSL 2 BASIC6.06□□□□□ -1.44
H3F3AP84243 SLC12A1-202ENST00000380993 4707 ntAPPRIS P3 TSL 5 BASIC6.06□□□□□ -1.44
H3F3AP84243 TAS2R42-201ENST00000334266 945 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
H3F3AP84243 RNU1-24P-201ENST00000364285 165 ntBASIC6.06□□□□□ -1.44
H3F3AP84243 S100A1-202ENST00000368696 522 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
H3F3AP84243 MLXIP-203ENST00000377037 805 ntTSL 5 BASIC6.06□□□□□ -1.44
H3F3AP84243 CYCSP17-201ENST00000407870 315 ntBASIC6.06□□□□□ -1.44
H3F3AP84243 AL663061.1-201ENST00000416625 580 ntBASIC6.06□□□□□ -1.44
H3F3AP84243 AC239367.3-201ENST00000428996 814 ntBASIC6.06□□□□□ -1.44
H3F3AP84243 AL590128.1-201ENST00000433407 286 ntBASIC6.06□□□□□ -1.44
H3F3AP84243 AC068888.2-201ENST00000435621 536 ntTSL 3 BASIC6.06□□□□□ -1.44
H3F3AP84243 NFIA-AS2-203ENST00000438559 1275 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
H3F3AP84243 LINC01681-201ENST00000439184 760 ntTSL 2 BASIC6.06□□□□□ -1.44
H3F3AP84243 AC104162.1-204ENST00000443346 708 ntTSL 3 BASIC6.06□□□□□ -1.44
H3F3AP84243 AC016822.1-201ENST00000457975 439 ntTSL 3 BASIC6.06□□□□□ -1.44
H3F3AP84243 RN7SL372P-201ENST00000461982 298 ntBASIC6.06□□□□□ -1.44
H3F3AP84243 AL079303.1-201ENST00000486611 463 ntBASIC6.06□□□□□ -1.44
H3F3AP84243 MTERF4-220ENST00000495694 909 ntTSL 5 BASIC6.06□□□□□ -1.44
H3F3AP84243 ADAM3A-209ENST00000497806 1245 ntTSL 5 BASIC6.06□□□□□ -1.44
H3F3AP84243 AC104825.1-201ENST00000503186 685 ntTSL 3 BASIC6.06□□□□□ -1.44
H3F3AP84243 AC139491.5-201ENST00000510029 920 ntTSL 5 BASIC6.06□□□□□ -1.44
H3F3AP84243 ZNF706-212ENST00000520984 782 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
H3F3AP84243 AC084026.1-201ENST00000522028 564 ntTSL 4 BASIC6.06□□□□□ -1.44
H3F3AP84243 PHBP2-201ENST00000532859 806 ntBASIC6.06□□□□□ -1.44
H3F3AP84243 SETP17-201ENST00000534163 817 ntBASIC6.06□□□□□ -1.44
H3F3AP84243 SRSF5-209ENST00000555349 565 ntTSL 4 BASIC6.06□□□□□ -1.44
H3F3AP84243 AL356017.1-201ENST00000556796 594 ntTSL 4 BASIC6.06□□□□□ -1.44
H3F3AP84243 AL109628.1-201ENST00000556877 366 ntBASIC6.06□□□□□ -1.44
H3F3AP84243 AC013652.1-204ENST00000558209 489 ntTSL 3 BASIC6.06□□□□□ -1.44
H3F3AP84243 AC025040.1-201ENST00000560375 1284 ntTSL 2 BASIC6.06□□□□□ -1.44
H3F3AP84243 TRIM69-208ENST00000560442 1262 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
H3F3AP84243 AC087286.3-201ENST00000561409 953 ntTSL 3 BASIC6.06□□□□□ -1.44
H3F3AP84243 AC004232.1-201ENST00000571388 208 ntBASIC6.06□□□□□ -1.44
H3F3AP84243 MIR4312-201ENST00000579909 76 ntBASIC6.06□□□□□ -1.44
H3F3AP84243 AL353593.3-201ENST00000602778 764 ntTSL 2 BASIC6.06□□□□□ -1.44
H3F3AP84243 AL513218.1-201ENST00000606527 391 ntBASIC6.06□□□□□ -1.44
H3F3AP84243 PTCHD3P1-201ENST00000612350 537 ntBASIC6.06□□□□□ -1.44
H3F3AP84243 AC243919.1-201ENST00000613086 785 ntTSL 5 BASIC6.06□□□□□ -1.44
H3F3AP84243 AL354702.2-202ENST00000641481 890 ntBASIC6.06□□□□□ -1.44
H3F3AP84243 FAM197Y2-202ENST00000448006 2338 ntTSL 2 BASIC6.06□□□□□ -1.44
H3F3AP84243 ZNF559-212ENST00000592896 1488 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
H3F3AP84243 GJA10-203ENST00000638915 1479 ntAPPRIS ALT2 TSL 5 BASIC6.06□□□□□ -1.44
H3F3AP84243 PYHIN1-203ENST00000368140 2083 ntAPPRIS P4 TSL 1 (best) BASIC6.06□□□□□ -1.44
H3F3AP84243 AL136317.2-201ENST00000619851 2254 ntTSL 2 BASIC6.06□□□□□ -1.44
H3F3AP84243 EOGT-201ENST00000295571 4138 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
H3F3AP84243 COX7B-203ENST00000481445 2471 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
H3F3AP84243 OR52B5P-204ENST00000641744 3467 ntBASIC6.06□□□□□ -1.44
H3F3AP84243 NAV1-201ENST00000367295 11645 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
H3F3AP84243 LARP1B-201ENST00000326639 4891 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
H3F3AP84243 TRMT10A-202ENST00000394876 1638 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
H3F3AP84243 LINC-ROR-201ENST00000553704 2603 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
H3F3AP84243 SLMAP-202ENST00000295952 4420 ntAPPRIS P1 TSL 2 BASIC6.06□□□□□ -1.44
H3F3AP84243 NBPF9-206ENST00000613969 4624 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
H3F3AP84243 ODF2L-202ENST00000317336 4376 ntTSL 5 BASIC6.06□□□□□ -1.44
H3F3AP84243 FLRT3-201ENST00000341420 3971 ntAPPRIS P1 TSL 2 BASIC6.06□□□□□ -1.44
H3F3AP84243 RPL7L1-201ENST00000304734 3769 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
H3F3AP84243 ZNF268-209ENST00000541009 3773 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
H3F3AP84243 CDY2A-202ENST00000426790 2369 ntAPPRIS P5 TSL 5 BASIC6.06□□□□□ -1.44
H3F3AP84243 CDY2B-202ENST00000544303 2369 ntAPPRIS P5 TSL 5 BASIC6.06□□□□□ -1.44
H3F3AP84243 ANKRD12-201ENST00000262126 11288 ntAPPRIS P3 TSL 1 (best) BASIC6.06□□□□□ -1.44
H3F3AP84243 ETFBKMT-201ENST00000357721 6128 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 70.5 ms