Protein–RNA interactions for Protein: A2RUB6

CCDC66, Coiled-coil domain-containing protein 66, humanhuman

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66A2RUB6 FOPNL-207ENST00000575073 530 ntTSL 2 BASIC7.7□□□□□ -1.18
CCDC66A2RUB6 SNURF-202ENST00000577949 650 ntAPPRIS P1 TSL 2 BASIC7.7□□□□□ -1.18
CCDC66A2RUB6 DSG1-AS1-204ENST00000581856 669 ntTSL 3 BASIC7.7□□□□□ -1.18
CCDC66A2RUB6 AL121985.1-203ENST00000588034 556 ntTSL 4 BASIC7.7□□□□□ -1.18
CCDC66A2RUB6 MCM3AP-AS1-207ENST00000588753 589 ntTSL 4 BASIC7.7□□□□□ -1.18
CCDC66A2RUB6 ZNF208-202ENST00000597040 781 ntTSL 2 BASIC7.7□□□□□ -1.18
CCDC66A2RUB6 AC022239.4-201ENST00000602626 504 ntBASIC7.7□□□□□ -1.18
CCDC66A2RUB6 CUX2P1-201ENST00000606426 298 ntBASIC7.7□□□□□ -1.18
CCDC66A2RUB6 MIR6723-201ENST00000621981 89 ntBASIC7.7□□□□□ -1.18
CCDC66A2RUB6 AL390964.1-201ENST00000622486 845 ntTSL 3 BASIC7.7□□□□□ -1.18
CCDC66A2RUB6 AL138955.1-201ENST00000622881 1040 ntBASIC7.7□□□□□ -1.18
CCDC66A2RUB6 AC079456.1-201ENST00000624010 480 ntBASIC7.7□□□□□ -1.18
CCDC66A2RUB6 METAP1-212ENST00000625963 147 ntTSL 5 BASIC7.7□□□□□ -1.18
CCDC66A2RUB6 AC106799.3-201ENST00000562127 3300 ntTSL 2 BASIC7.7□□□□□ -1.18
CCDC66A2RUB6 DMD-222ENST00000474231 5209 ntTSL 5 BASIC7.7□□□□□ -1.18
CCDC66A2RUB6 ZNF14-201ENST00000344099 2949 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
CCDC66A2RUB6 KAT14-201ENST00000377681 3483 ntAPPRIS ALT1 TSL 5 BASIC7.7□□□□□ -1.18
CCDC66A2RUB6 FO082842.1-201ENST00000423552 1370 ntBASIC7.7□□□□□ -1.18
CCDC66A2RUB6 AASDH-203ENST00000502617 3004 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
CCDC66A2RUB6 MUC15-204ENST00000527569 1386 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
CCDC66A2RUB6 PYROXD1-205ENST00000538582 3639 ntTSL 2 BASIC7.7□□□□□ -1.18
CCDC66A2RUB6 IKZF3-215ENST00000535189 1996 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
CCDC66A2RUB6 TMTC3-201ENST00000266712 7203 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
CCDC66A2RUB6 ARNT-201ENST00000354396 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC7.69□□□□□ -1.18
CCDC66A2RUB6 KCNA2-209ENST00000639048 10836 ntTSL 5 BASIC7.69□□□□□ -1.18
CCDC66A2RUB6 PIGN-238ENST00000639758 4239 ntTSL 5 BASIC7.69□□□□□ -1.18
CCDC66A2RUB6 ODF2L-202ENST00000317336 4376 ntTSL 5 BASIC7.69□□□□□ -1.18
CCDC66A2RUB6 ADAM7-204ENST00000520720 1870 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
CCDC66A2RUB6 BRS3-201ENST00000370648 2833 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
CCDC66A2RUB6 CFAP221-203ENST00000413369 2801 ntAPPRIS P1 TSL 5 BASIC7.69□□□□□ -1.18
CCDC66A2RUB6 DCC-202ENST00000412726 9525 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
CCDC66A2RUB6 ACTR3C-201ENST00000252071 1218 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
CCDC66A2RUB6 KCNIP2-202ENST00000343195 663 ntAPPRIS P3 TSL 1 (best) BASIC7.69□□□□□ -1.18
CCDC66A2RUB6 Y_RNA.62-201ENST00000362840 99 ntBASIC7.69□□□□□ -1.18
CCDC66A2RUB6 RNA5SP333-201ENST00000363466 118 ntBASIC7.69□□□□□ -1.18
CCDC66A2RUB6 RNA5SP334-201ENST00000364825 118 ntBASIC7.69□□□□□ -1.18
CCDC66A2RUB6 RNU1-16P-201ENST00000365477 164 ntBASIC7.69□□□□□ -1.18
CCDC66A2RUB6 NRIR-201ENST00000366140 799 ntTSL 3 BASIC7.69□□□□□ -1.18
CCDC66A2RUB6 IGKV6D-41-201ENST00000390271 371 ntAPPRIS P1 BASIC7.69□□□□□ -1.18
CCDC66A2RUB6 AJ239321.1-201ENST00000424255 564 ntBASIC7.69□□□□□ -1.18
CCDC66A2RUB6 MTCO2P17-201ENST00000424336 677 ntBASIC7.69□□□□□ -1.18
CCDC66A2RUB6 AL773545.1-201ENST00000425632 347 ntTSL 5 BASIC7.69□□□□□ -1.18
CCDC66A2RUB6 AC017019.1-201ENST00000426129 261 ntBASIC7.69□□□□□ -1.18
CCDC66A2RUB6 AC113331.1-201ENST00000428160 869 ntTSL 2 BASIC7.69□□□□□ -1.18
CCDC66A2RUB6 GTF3AP6-201ENST00000432585 986 ntBASIC7.69□□□□□ -1.18
CCDC66A2RUB6 H3F3BP1-201ENST00000440551 403 ntBASIC7.69□□□□□ -1.18
CCDC66A2RUB6 PRSS48-201ENST00000441586 560 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
CCDC66A2RUB6 AL606490.8-201ENST00000441624 319 ntBASIC7.69□□□□□ -1.18
CCDC66A2RUB6 AC093581.1-204ENST00000442606 390 ntTSL 3 BASIC7.69□□□□□ -1.18
CCDC66A2RUB6 AL136528.1-201ENST00000443034 754 ntTSL 3 BASIC7.69□□□□□ -1.18
CCDC66A2RUB6 AC092164.1-203ENST00000444501 723 ntTSL 3 BASIC7.69□□□□□ -1.18
CCDC66A2RUB6 AL133215.1-201ENST00000447344 342 ntTSL 3 BASIC7.69□□□□□ -1.18
CCDC66A2RUB6 AC009963.4-201ENST00000448535 339 ntBASIC7.69□□□□□ -1.18
CCDC66A2RUB6 AC108868.2-201ENST00000451464 511 ntTSL 2 BASIC7.69□□□□□ -1.18
CCDC66A2RUB6 RPS29P5-201ENST00000452777 171 ntBASIC7.69□□□□□ -1.18
CCDC66A2RUB6 OFD1P3Y-201ENST00000453312 783 ntBASIC7.69□□□□□ -1.18
CCDC66A2RUB6 AL049650.1-201ENST00000461548 823 ntAPPRIS P1 TSL 5 BASIC7.69□□□□□ -1.18
CCDC66A2RUB6 AC108751.3-201ENST00000461814 1020 ntBASIC7.69□□□□□ -1.18
CCDC66A2RUB6 PANCR-201ENST00000503456 493 ntTSL 5 BASIC7.69□□□□□ -1.18
CCDC66A2RUB6 LINC01612-201ENST00000504509 469 ntTSL 3 BASIC7.69□□□□□ -1.18
CCDC66A2RUB6 RN7SKP248-201ENST00000516278 305 ntBASIC7.69□□□□□ -1.18
CCDC66A2RUB6 AC053513.1-201ENST00000543604 738 ntTSL 3 BASIC7.69□□□□□ -1.18
CCDC66A2RUB6 PRB1-203ENST00000545626 710 ntAPPRIS ALT2 TSL 1 (best) BASIC7.69□□□□□ -1.18
CCDC66A2RUB6 DCN-207ENST00000546370 586 ntTSL 3 BASIC7.69□□□□□ -1.18
CCDC66A2RUB6 AC103740.1-204ENST00000557994 570 ntTSL 4 BASIC7.69□□□□□ -1.18
CCDC66A2RUB6 DNM1P47-201ENST00000560757 334 ntTSL 3 BASIC7.69□□□□□ -1.18
CCDC66A2RUB6 AC106785.3-201ENST00000564064 847 ntBASIC7.69□□□□□ -1.18
CCDC66A2RUB6 AC007611.1-202ENST00000564212 854 ntTSL 3 BASIC7.69□□□□□ -1.18
CCDC66A2RUB6 AC007614.3-201ENST00000564875 654 ntTSL 3 BASIC7.69□□□□□ -1.18
CCDC66A2RUB6 AC092368.2-201ENST00000565911 600 ntBASIC7.69□□□□□ -1.18
CCDC66A2RUB6 AC136944.5-201ENST00000573021 151 ntBASIC7.69□□□□□ -1.18
CCDC66A2RUB6 ZNF174-205ENST00000575752 1068 ntTSL 5 BASIC7.69□□□□□ -1.18
CCDC66A2RUB6 AC012447.1-201ENST00000577914 682 ntTSL 3 BASIC7.69□□□□□ -1.18
CCDC66A2RUB6 AC104984.3-201ENST00000581946 546 ntTSL 5 BASIC7.69□□□□□ -1.18
CCDC66A2RUB6 CRYAB-216ENST00000616970 977 ntAPPRIS P1 TSL 2 BASIC7.69□□□□□ -1.18
CCDC66A2RUB6 EAPP-205ENST00000618169 1237 ntTSL 5 BASIC7.69□□□□□ -1.18
CCDC66A2RUB6 PFN1P2-202ENST00000621347 397 ntBASIC7.69□□□□□ -1.18
CCDC66A2RUB6 AC097655.1-201ENST00000635075 318 ntBASIC7.69□□□□□ -1.18
CCDC66A2RUB6 AC010168.2-201ENST00000562691 5428 ntBASIC7.69□□□□□ -1.18
CCDC66A2RUB6 SMIM21-203ENST00000584508 2554 ntAPPRIS ALT2 TSL 1 (best) BASIC7.69□□□□□ -1.18
CCDC66A2RUB6 TNKS-206ENST00000518281 3897 ntTSL 2 BASIC7.69□□□□□ -1.18
CCDC66A2RUB6 TM4SF20-201ENST00000304568 2296 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
CCDC66A2RUB6 CDY7P-201ENST00000429883 1604 ntBASIC7.69□□□□□ -1.18
CCDC66A2RUB6 UPF2-201ENST00000356352 5569 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
CCDC66A2RUB6 VNN3-202ENST00000367927 1717 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
CCDC66A2RUB6 PRLR-216ENST00000542609 1764 ntTSL 5 BASIC7.69□□□□□ -1.18
CCDC66A2RUB6 AL391380.1-201ENST00000439300 1432 ntBASIC7.69□□□□□ -1.18
CCDC66A2RUB6 CREM-218ENST00000460270 1416 ntTSL 2 BASIC7.69□□□□□ -1.18
CCDC66A2RUB6 TRIM60P14-201ENST00000513444 1419 ntBASIC7.69□□□□□ -1.18
CCDC66A2RUB6 OLFM3-201ENST00000338858 2189 ntAPPRIS ALT1 TSL 1 (best) BASIC7.69□□□□□ -1.18
CCDC66A2RUB6 KIAA0753-207ENST00000572370 3263 ntAPPRIS ALT2 TSL 2 BASIC7.69□□□□□ -1.18
CCDC66A2RUB6 ASNS-209ENST00000444334 1812 ntTSL 2 BASIC7.68□□□□□ -1.18
CCDC66A2RUB6 SEMA3A-204ENST00000436949 2550 ntAPPRIS P1 TSL 5 BASIC7.68□□□□□ -1.18
CCDC66A2RUB6 AL606516.1-201ENST00000455438 1861 ntTSL 2 BASIC7.68□□□□□ -1.18
CCDC66A2RUB6 GOLGB1-202ENST00000393667 11198 ntAPPRIS ALT2 TSL 1 (best) BASIC7.68□□□□□ -1.18
CCDC66A2RUB6 INHBA-AS1-203ENST00000422822 2312 ntTSL 2 BASIC7.68□□□□□ -1.18
CCDC66A2RUB6 AP001157.1-201ENST00000550837 2339 ntBASIC7.68□□□□□ -1.18
CCDC66A2RUB6 ADH4-212ENST00000629236 1974 ntTSL 5 BASIC7.68□□□□□ -1.18
CCDC66A2RUB6 MCTP2-201ENST00000357742 7555 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
CCDC66A2RUB6 LMO3-202ENST00000320122 3759 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
Retrieved 100 of 98,524 protein–RNA pairs in 94 ms