Protein–RNA interactions for Protein: Q96CF2

CHMP4C, Charged multivesicular body protein 4c, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4CQ96CF2 SNTN-203ENST00000496807 3746 ntTSL 4 BASIC8.32□□□□□ -1.08
CHMP4CQ96CF2 AP000866.1-202ENST00000529392 2792 ntTSL 2 BASIC8.32□□□□□ -1.08
CHMP4CQ96CF2 RPL12P13-201ENST00000310055 497 ntBASIC8.32□□□□□ -1.08
CHMP4CQ96CF2 SNTN-201ENST00000343837 1090 ntAPPRIS P1 TSL 2 BASIC8.32□□□□□ -1.08
CHMP4CQ96CF2 RNA5SP172-201ENST00000365061 118 ntBASIC8.32□□□□□ -1.08
CHMP4CQ96CF2 SMPX-201ENST00000379494 938 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
CHMP4CQ96CF2 MIR640-201ENST00000385086 96 ntBASIC8.32□□□□□ -1.08
CHMP4CQ96CF2 RN7SKP268-201ENST00000411107 316 ntBASIC8.32□□□□□ -1.08
CHMP4CQ96CF2 SMARCA2-211ENST00000417599 980 ntTSL 5 BASIC8.32□□□□□ -1.08
CHMP4CQ96CF2 AL049712.1-201ENST00000418739 872 ntTSL 3 BASIC8.32□□□□□ -1.08
CHMP4CQ96CF2 CD33-203ENST00000421133 1023 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
CHMP4CQ96CF2 AL512641.1-201ENST00000427232 548 ntTSL 3 BASIC8.32□□□□□ -1.08
CHMP4CQ96CF2 AC019211.1-201ENST00000432993 754 ntTSL 3 BASIC8.32□□□□□ -1.08
CHMP4CQ96CF2 KATNBL1P2-201ENST00000433311 835 ntBASIC8.32□□□□□ -1.08
CHMP4CQ96CF2 LINC01781-202ENST00000443104 591 ntTSL 2 BASIC8.32□□□□□ -1.08
CHMP4CQ96CF2 TAS2R39-201ENST00000446620 1017 ntAPPRIS P1 BASIC8.32□□□□□ -1.08
CHMP4CQ96CF2 PPIAP32-201ENST00000449940 472 ntBASIC8.32□□□□□ -1.08
CHMP4CQ96CF2 AC009244.1-201ENST00000450566 258 ntBASIC8.32□□□□□ -1.08
CHMP4CQ96CF2 EIF3LP2-201ENST00000457262 807 ntBASIC8.32□□□□□ -1.08
CHMP4CQ96CF2 AL138787.2-201ENST00000466576 367 ntTSL 3 BASIC8.32□□□□□ -1.08
CHMP4CQ96CF2 AC126615.1-201ENST00000470084 630 ntBASIC8.32□□□□□ -1.08
CHMP4CQ96CF2 AC093668.1-201ENST00000514917 911 ntAPPRIS P1 TSL 3 BASIC8.32□□□□□ -1.08
CHMP4CQ96CF2 CASC11-203ENST00000519071 791 ntTSL 3 BASIC8.32□□□□□ -1.08
CHMP4CQ96CF2 PHBP2-201ENST00000532859 806 ntBASIC8.32□□□□□ -1.08
CHMP4CQ96CF2 AP001107.4-201ENST00000533576 539 ntTSL 3 BASIC8.32□□□□□ -1.08
CHMP4CQ96CF2 AC079600.3-201ENST00000547898 447 ntTSL 5 BASIC8.32□□□□□ -1.08
CHMP4CQ96CF2 AC069240.2-201ENST00000550242 609 ntBASIC8.32□□□□□ -1.08
CHMP4CQ96CF2 AL135978.1-201ENST00000553618 1266 ntBASIC8.32□□□□□ -1.08
CHMP4CQ96CF2 AC021979.2-201ENST00000553644 209 ntTSL 5 BASIC8.32□□□□□ -1.08
CHMP4CQ96CF2 AC108097.1-201ENST00000568275 534 ntTSL 4 BASIC8.32□□□□□ -1.08
CHMP4CQ96CF2 AC006441.1-201ENST00000581083 437 ntTSL 5 BASIC8.32□□□□□ -1.08
CHMP4CQ96CF2 AL136084.2-214ENST00000587726 716 ntTSL 5 BASIC8.32□□□□□ -1.08
CHMP4CQ96CF2 AL591222.2-201ENST00000604443 754 ntBASIC8.32□□□□□ -1.08
CHMP4CQ96CF2 AC019080.4-201ENST00000606200 564 ntTSL 5 BASIC8.32□□□□□ -1.08
CHMP4CQ96CF2 AL021368.1-201ENST00000607490 540 ntBASIC8.32□□□□□ -1.08
CHMP4CQ96CF2 AC016590.3-201ENST00000611171 753 ntBASIC8.32□□□□□ -1.08
CHMP4CQ96CF2 AC245407.2-201ENST00000614199 451 ntBASIC8.32□□□□□ -1.08
CHMP4CQ96CF2 AC106782.7-201ENST00000624024 418 ntBASIC8.32□□□□□ -1.08
CHMP4CQ96CF2 AC133555.5-201ENST00000624430 418 ntBASIC8.32□□□□□ -1.08
CHMP4CQ96CF2 PSMD10P2-202ENST00000626135 819 ntTSL 5 BASIC8.32□□□□□ -1.08
CHMP4CQ96CF2 GAS2-201ENST00000278187 2170 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
CHMP4CQ96CF2 ZFP90-201ENST00000398253 4384 ntAPPRIS P1 TSL 4 BASIC8.32□□□□□ -1.08
CHMP4CQ96CF2 LINC01559-201ENST00000318426 2750 ntTSL 2 BASIC8.32□□□□□ -1.08
CHMP4CQ96CF2 AGXT2-201ENST00000231420 2364 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
CHMP4CQ96CF2 LRRC31-201ENST00000264676 2355 ntAPPRIS ALT2 TSL 2 BASIC8.32□□□□□ -1.08
CHMP4CQ96CF2 TPTE2P2-201ENST00000403471 1466 ntBASIC8.32□□□□□ -1.08
CHMP4CQ96CF2 SLC9A9-201ENST00000316549 3627 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
CHMP4CQ96CF2 SYT4-201ENST00000255224 4110 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
CHMP4CQ96CF2 OR5M2P-202ENST00000641241 4242 ntBASIC8.31□□□□□ -1.08
CHMP4CQ96CF2 ANKRD12-201ENST00000262126 11288 ntAPPRIS P3 TSL 1 (best) BASIC8.31□□□□□ -1.08
CHMP4CQ96CF2 DPPA4-201ENST00000335658 2817 ntAPPRIS P2 TSL 1 (best) BASIC8.31□□□□□ -1.08
CHMP4CQ96CF2 ST6GAL1-211ENST00000448044 4302 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
CHMP4CQ96CF2 CHRM5-201ENST00000383263 5410 ntAPPRIS P1 TSL 2 BASIC8.31□□□□□ -1.08
CHMP4CQ96CF2 AKR1C2-201ENST00000380753 3756 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
CHMP4CQ96CF2 OR7G2-202ENST00000641081 3015 ntAPPRIS ALT2 BASIC8.31□□□□□ -1.08
CHMP4CQ96CF2 AC089998.1-201ENST00000548575 3141 ntBASIC8.31□□□□□ -1.08
CHMP4CQ96CF2 CDH17-203ENST00000450165 2625 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
CHMP4CQ96CF2 AL121949.2-201ENST00000403446 1548 ntBASIC8.31□□□□□ -1.08
CHMP4CQ96CF2 OR5B17-201ENST00000357377 946 ntAPPRIS P1 BASIC8.31□□□□□ -1.08
CHMP4CQ96CF2 RN7SKP55-201ENST00000364888 307 ntBASIC8.31□□□□□ -1.08
CHMP4CQ96CF2 PLIN2-203ENST00000380465 631 ntTSL 2 BASIC8.31□□□□□ -1.08
CHMP4CQ96CF2 ASPH-204ENST00000389204 1290 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
CHMP4CQ96CF2 TRAV5-201ENST00000390427 352 ntAPPRIS P1 BASIC8.31□□□□□ -1.08
CHMP4CQ96CF2 TRAV27-201ENST00000390457 425 ntAPPRIS P1 BASIC8.31□□□□□ -1.08
CHMP4CQ96CF2 UGT1A6-203ENST00000406651 785 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
CHMP4CQ96CF2 MTND3P20-201ENST00000407663 186 ntBASIC8.31□□□□□ -1.08
CHMP4CQ96CF2 AL136100.1-201ENST00000407696 330 ntBASIC8.31□□□□□ -1.08
CHMP4CQ96CF2 RN7SKP254-201ENST00000410685 310 ntBASIC8.31□□□□□ -1.08
CHMP4CQ96CF2 RNA5SP280-201ENST00000411230 115 ntBASIC8.31□□□□□ -1.08
CHMP4CQ96CF2 AC009468.1-201ENST00000412800 437 ntTSL 3 BASIC8.31□□□□□ -1.08
CHMP4CQ96CF2 AC019130.1-201ENST00000413841 391 ntTSL 2 BASIC8.31□□□□□ -1.08
CHMP4CQ96CF2 YWHAZP5-201ENST00000419975 730 ntBASIC8.31□□□□□ -1.08
CHMP4CQ96CF2 AC006455.6-201ENST00000426192 893 ntBASIC8.31□□□□□ -1.08
CHMP4CQ96CF2 BX119904.3-201ENST00000428194 957 ntBASIC8.31□□□□□ -1.08
CHMP4CQ96CF2 AC104463.2-201ENST00000428573 314 ntTSL 5 BASIC8.31□□□□□ -1.08
CHMP4CQ96CF2 AL159174.1-201ENST00000438267 811 ntTSL 3 BASIC8.31□□□□□ -1.08
CHMP4CQ96CF2 CFLAR-212ENST00000440180 1198 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
CHMP4CQ96CF2 HBG2-204ENST00000444587 307 ntTSL 2 BASIC8.31□□□□□ -1.08
CHMP4CQ96CF2 AC009948.1-203ENST00000450044 793 ntTSL 3 BASIC8.31□□□□□ -1.08
CHMP4CQ96CF2 AL035420.1-202ENST00000450129 357 ntTSL 3 BASIC8.31□□□□□ -1.08
CHMP4CQ96CF2 AL117382.2-201ENST00000455642 403 ntTSL 3 BASIC8.31□□□□□ -1.08
CHMP4CQ96CF2 AL354872.1-201ENST00000456361 967 ntBASIC8.31□□□□□ -1.08
CHMP4CQ96CF2 RPSAP24-201ENST00000461543 873 ntBASIC8.31□□□□□ -1.08
CHMP4CQ96CF2 AC026254.2-201ENST00000475295 371 ntBASIC8.31□□□□□ -1.08
CHMP4CQ96CF2 AP001007.2-201ENST00000525429 593 ntTSL 3 BASIC8.31□□□□□ -1.08
CHMP4CQ96CF2 CNEP1R1-204ENST00000562576 656 ntTSL 5 BASIC8.31□□□□□ -1.08
CHMP4CQ96CF2 AC110603.1-201ENST00000580645 468 ntTSL 3 BASIC8.31□□□□□ -1.08
CHMP4CQ96CF2 MIR5682-201ENST00000584864 76 ntBASIC8.31□□□□□ -1.08
CHMP4CQ96CF2 AC098847.2-201ENST00000588088 528 ntTSL 5 BASIC8.31□□□□□ -1.08
CHMP4CQ96CF2 AL512605.1-201ENST00000588215 1263 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
CHMP4CQ96CF2 AL121830.1-206ENST00000608476 1254 ntTSL 5 BASIC8.31□□□□□ -1.08
CHMP4CQ96CF2 FP325318.1-201ENST00000616097 1263 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
CHMP4CQ96CF2 AC005355.2-201ENST00000625064 484 ntBASIC8.31□□□□□ -1.08
CHMP4CQ96CF2 AL359094.1-202ENST00000629917 1113 ntTSL 5 BASIC8.31□□□□□ -1.08
CHMP4CQ96CF2 GUSBP1-205ENST00000607545 4157 ntTSL 2 BASIC8.31□□□□□ -1.08
CHMP4CQ96CF2 AC007402.1-201ENST00000440698 3939 ntTSL 2 BASIC8.31□□□□□ -1.08
CHMP4CQ96CF2 C1D-202ENST00000407324 1379 ntTSL 3 BASIC8.31□□□□□ -1.08
CHMP4CQ96CF2 AKAP5-202ENST00000394718 6487 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
CHMP4CQ96CF2 UBR4-204ENST00000375254 15906 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
CHMP4CQ96CF2 ANKRD44-202ENST00000328737 3686 ntTSL 2 BASIC8.31□□□□□ -1.08
Retrieved 100 of 98,524 protein–RNA pairs in 87.1 ms