Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 AC011008.2-201ENST00000624866 3352 ntBASIC6.32□□□□□ -1.4
RFC3P40938 RNA5SP172-201ENST00000365061 118 ntBASIC6.32□□□□□ -1.4
RFC3P40938 C1orf162-202ENST00000369718 915 ntAPPRIS ALT2 TSL 2 BASIC6.32□□□□□ -1.4
RFC3P40938 FABP3-201ENST00000373713 725 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
RFC3P40938 SNORA7A-201ENST00000384765 139 ntBASIC6.32□□□□□ -1.4
RFC3P40938 TRBV6-7-201ENST00000390373 344 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
RFC3P40938 AL353133.1-201ENST00000407695 401 ntBASIC6.32□□□□□ -1.4
RFC3P40938 RN7SKP91-201ENST00000410852 288 ntBASIC6.32□□□□□ -1.4
RFC3P40938 DLEU1-AS1-201ENST00000428276 731 ntTSL 3 BASIC6.32□□□□□ -1.4
RFC3P40938 LINC01221-201ENST00000432488 662 ntTSL 3 BASIC6.32□□□□□ -1.4
RFC3P40938 MYL6P3-201ENST00000436904 432 ntBASIC6.32□□□□□ -1.4
RFC3P40938 AC234771.4-201ENST00000441416 730 ntBASIC6.32□□□□□ -1.4
RFC3P40938 AL391361.2-203ENST00000443380 413 ntTSL 2 BASIC6.32□□□□□ -1.4
RFC3P40938 LINC01832-201ENST00000446520 553 ntTSL 4 BASIC6.32□□□□□ -1.4
RFC3P40938 DPP10-AS1-202ENST00000448663 644 ntTSL 3 BASIC6.32□□□□□ -1.4
RFC3P40938 NPM1P9-201ENST00000453156 844 ntBASIC6.32□□□□□ -1.4
RFC3P40938 PSMA6P2-201ENST00000457574 686 ntBASIC6.32□□□□□ -1.4
RFC3P40938 RPS26P11-201ENST00000463445 348 ntBASIC6.32□□□□□ -1.4
RFC3P40938 RPS26P6-201ENST00000475156 348 ntBASIC6.32□□□□□ -1.4
RFC3P40938 RN7SL502P-201ENST00000481857 290 ntBASIC6.32□□□□□ -1.4
RFC3P40938 RPL5P33-201ENST00000487833 905 ntBASIC6.32□□□□□ -1.4
RFC3P40938 SNRPCP11-201ENST00000492453 205 ntBASIC6.32□□□□□ -1.4
RFC3P40938 AK6-203ENST00000502819 743 ntTSL 5 BASIC6.32□□□□□ -1.4
RFC3P40938 LINC01484-201ENST00000517733 555 ntTSL 4 BASIC6.32□□□□□ -1.4
RFC3P40938 AP005902.2-201ENST00000518393 307 ntBASIC6.32□□□□□ -1.4
RFC3P40938 AC013652.1-204ENST00000558209 489 ntTSL 3 BASIC6.32□□□□□ -1.4
RFC3P40938 ACTG1P15-201ENST00000570019 1063 ntBASIC6.32□□□□□ -1.4
RFC3P40938 PPIAP14-201ENST00000577627 496 ntBASIC6.32□□□□□ -1.4
RFC3P40938 AC012593.1-208ENST00000587791 696 ntTSL 5 BASIC6.32□□□□□ -1.4
RFC3P40938 RPS4XP21-201ENST00000603814 750 ntBASIC6.32□□□□□ -1.4
RFC3P40938 AP003481.1-202ENST00000608214 503 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
RFC3P40938 AL137000.1-201ENST00000610528 1244 ntBASIC6.32□□□□□ -1.4
RFC3P40938 AC241377.2-201ENST00000612313 553 ntTSL 4 BASIC6.32□□□□□ -1.4
RFC3P40938 AL121583.1-201ENST00000612444 682 ntBASIC6.32□□□□□ -1.4
RFC3P40938 MIR6889-201ENST00000613185 59 ntBASIC6.32□□□□□ -1.4
RFC3P40938 SORBS1-205ENST00000371227 7279 ntAPPRIS ALT2 TSL 1 (best) BASIC6.32□□□□□ -1.4
RFC3P40938 YPEL5-201ENST00000261353 2182 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
RFC3P40938 ZFHX4-204ENST00000518282 12175 ntAPPRIS ALT2 TSL 5 BASIC6.32□□□□□ -1.4
RFC3P40938 CYLD-203ENST00000427738 8503 ntTSL 5 BASIC6.32□□□□□ -1.4
RFC3P40938 C8orf34-208ENST00000523686 1948 ntAPPRIS ALT2 TSL 2 BASIC6.32□□□□□ -1.4
RFC3P40938 SORBS2-230ENST00000448662 4356 ntTSL 2 BASIC6.32□□□□□ -1.4
RFC3P40938 NT5C3A-201ENST00000242210 1670 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
RFC3P40938 LYSMD3-203ENST00000500869 3863 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
RFC3P40938 ENPP3-203ENST00000414305 3418 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
RFC3P40938 MARCH6-201ENST00000274140 9569 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
RFC3P40938 VDAC2-214ENST00000543351 1424 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
RFC3P40938 OR4K13-202ENST00000641664 5980 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
RFC3P40938 ADGRB3-201ENST00000238918 2927 ntTSL 2 BASIC6.32□□□□□ -1.4
RFC3P40938 LARP1B-201ENST00000326639 4891 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
RFC3P40938 LRRC37A12P-201ENST00000454917 1801 ntBASIC6.32□□□□□ -1.4
RFC3P40938 ATXN2-214ENST00000535949 3205 ntAPPRIS ALT2 TSL 1 (best) BASIC6.31□□□□□ -1.4
RFC3P40938 AC010329.1-201ENST00000593903 8328 ntBASIC6.31□□□□□ -1.4
RFC3P40938 SCN1A-204ENST00000423058 8191 ntAPPRIS ALT1 TSL 1 (best) BASIC6.31□□□□□ -1.4
RFC3P40938 FBLN5-205ENST00000556154 1875 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
RFC3P40938 SEMA5A-AS1-201ENST00000510879 1679 ntTSL 2 BASIC6.31□□□□□ -1.4
RFC3P40938 ATF3-201ENST00000336937 482 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
RFC3P40938 RN7SKP191-201ENST00000364713 306 ntBASIC6.31□□□□□ -1.4
RFC3P40938 RN7SKP130-201ENST00000364924 301 ntBASIC6.31□□□□□ -1.4
RFC3P40938 PFKFB1-201ENST00000374992 1156 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
RFC3P40938 XAGE3-202ENST00000375491 489 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
RFC3P40938 CFAP61-203ENST00000377293 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC6.31□□□□□ -1.4
RFC3P40938 TRAV5-201ENST00000390427 352 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
RFC3P40938 CD200R1L-201ENST00000398214 1296 ntAPPRIS P3 TSL 1 (best) BASIC6.31□□□□□ -1.4
RFC3P40938 RBBP4P4-201ENST00000398588 1289 ntBASIC6.31□□□□□ -1.4
RFC3P40938 AL391811.1-201ENST00000416908 423 ntTSL 3 BASIC6.31□□□□□ -1.4
RFC3P40938 RPL17P17-201ENST00000419491 557 ntBASIC6.31□□□□□ -1.4
RFC3P40938 MIR181A2HG-201ENST00000429139 662 ntTSL 2 BASIC6.31□□□□□ -1.4
RFC3P40938 AL138733.2-201ENST00000431947 804 ntTSL 5 BASIC6.31□□□□□ -1.4
RFC3P40938 HSFX3-201ENST00000431993 1264 ntAPPRIS P1 TSL 3 BASIC6.31□□□□□ -1.4
RFC3P40938 BX119917.1-201ENST00000432517 502 ntBASIC6.31□□□□□ -1.4
RFC3P40938 LINC01681-201ENST00000439184 760 ntTSL 2 BASIC6.31□□□□□ -1.4
RFC3P40938 AC005487.1-201ENST00000440208 665 ntTSL 5 BASIC6.31□□□□□ -1.4
RFC3P40938 ZNF197-AS1-201ENST00000447691 623 ntTSL 5 BASIC6.31□□□□□ -1.4
RFC3P40938 AL158835.1-204ENST00000449693 371 ntTSL 3 BASIC6.31□□□□□ -1.4
RFC3P40938 NDUFB3-204ENST00000454214 547 ntAPPRIS P1 TSL 2 BASIC6.31□□□□□ -1.4
RFC3P40938 AL050331.2-201ENST00000457319 421 ntTSL 3 BASIC6.31□□□□□ -1.4
RFC3P40938 RN7SL379P-201ENST00000479912 293 ntBASIC6.31□□□□□ -1.4
RFC3P40938 AC068647.2-202ENST00000485020 390 ntTSL 3 BASIC6.31□□□□□ -1.4
RFC3P40938 RN7SL37P-201ENST00000490461 307 ntBASIC6.31□□□□□ -1.4
RFC3P40938 PFN2-217ENST00000498307 556 ntTSL 4 BASIC6.31□□□□□ -1.4
RFC3P40938 AC110716.1-201ENST00000506934 607 ntTSL 2 BASIC6.31□□□□□ -1.4
RFC3P40938 AC010442.1-201ENST00000515583 816 ntBASIC6.31□□□□□ -1.4
RFC3P40938 FBXO16-208ENST00000519471 398 ntTSL 2 BASIC6.31□□□□□ -1.4
RFC3P40938 AC027288.1-201ENST00000548359 816 ntTSL 3 BASIC6.31□□□□□ -1.4
RFC3P40938 AC013283.1-201ENST00000557282 492 ntBASIC6.31□□□□□ -1.4
RFC3P40938 NIFKP4-201ENST00000567275 1192 ntBASIC6.31□□□□□ -1.4
RFC3P40938 AC126323.5-201ENST00000569913 592 ntTSL 3 BASIC6.31□□□□□ -1.4
RFC3P40938 DSG1-AS1-202ENST00000578477 588 ntTSL 3 BASIC6.31□□□□□ -1.4
RFC3P40938 AC005899.3-201ENST00000580360 271 ntTSL 3 BASIC6.31□□□□□ -1.4
RFC3P40938 LINC01919-203ENST00000581198 598 ntTSL 3 BASIC6.31□□□□□ -1.4
RFC3P40938 PPIAL4C-201ENST00000585245 600 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
RFC3P40938 AC010519.1-201ENST00000599924 344 ntTSL 5 BASIC6.31□□□□□ -1.4
RFC3P40938 AL390877.1-201ENST00000605704 214 ntBASIC6.31□□□□□ -1.4
RFC3P40938 AP005329.3-201ENST00000609924 686 ntBASIC6.31□□□□□ -1.4
RFC3P40938 AL353572.3-201ENST00000636536 670 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
RFC3P40938 RPE65-201ENST00000262340 2610 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
RFC3P40938 DNAJC16-202ENST00000375847 6069 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
RFC3P40938 MEPE-201ENST00000361056 1986 ntAPPRIS P3 TSL 1 (best) BASIC6.31□□□□□ -1.4
RFC3P40938 CACNA1E-209ENST00000621551 14886 ntAPPRIS ALT2 TSL 5 BASIC6.31□□□□□ -1.4
RFC3P40938 NOX1-204ENST00000372966 2529 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 108.3 ms