Protein–RNA interactions for Protein: P09341

CXCL1, Growth-regulated alpha protein, humanhuman

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1P09341 AC096708.2-201ENST00000577676 512 ntBASIC5.15□□□□□ -1.59
CXCL1P09341 MIR3689F-201ENST00000579617 66 ntBASIC5.15□□□□□ -1.59
CXCL1P09341 MIR5192-201ENST00000579892 92 ntBASIC5.15□□□□□ -1.59
CXCL1P09341 LINC00663-205ENST00000589508 432 ntTSL 3 BASIC5.15□□□□□ -1.59
CXCL1P09341 RPSAP66-201ENST00000592196 606 ntBASIC5.15□□□□□ -1.59
CXCL1P09341 AL023806.2-201ENST00000603042 263 ntBASIC5.15□□□□□ -1.59
CXCL1P09341 FAM228B-205ENST00000611127 975 ntAPPRIS P3 TSL 5 BASIC5.15□□□□□ -1.59
CXCL1P09341 MIR663AHG-237ENST00000615682 1030 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
CXCL1P09341 Six3os1_4.1-201ENST00000615706 324 ntBASIC5.15□□□□□ -1.59
CXCL1P09341 HOTTIP_2.1-201ENST00000616633 376 ntBASIC5.15□□□□□ -1.59
CXCL1P09341 AC005393.1-201ENST00000617916 584 ntBASIC5.15□□□□□ -1.59
CXCL1P09341 Metazoa_SRP.172-201ENST00000621807 265 ntBASIC5.15□□□□□ -1.59
CXCL1P09341 AC005785.2-201ENST00000624655 631 ntBASIC5.15□□□□□ -1.59
CXCL1P09341 AC119674.1-209ENST00000642031 997 ntBASIC5.15□□□□□ -1.59
CXCL1P09341 AC079753.1-201ENST00000623243 3868 ntBASIC5.15□□□□□ -1.59
CXCL1P09341 AC024651.2-201ENST00000562480 2098 ntBASIC5.15□□□□□ -1.59
CXCL1P09341 AP005435.3-201ENST00000531260 3198 ntBASIC5.15□□□□□ -1.59
CXCL1P09341 PROM1-201ENST00000447510 3977 ntAPPRIS P3 TSL 1 (best) BASIC5.15□□□□□ -1.59
CXCL1P09341 HHLA2-201ENST00000357759 2666 ntAPPRIS P3 TSL 1 (best) BASIC5.15□□□□□ -1.59
CXCL1P09341 DCP1A-201ENST00000294241 1853 ntTSL 2 BASIC5.15□□□□□ -1.59
CXCL1P09341 LINC02397-201ENST00000504409 10626 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
CXCL1P09341 GRID2-204ENST00000510992 2739 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
CXCL1P09341 AC096992.2-201ENST00000609553 1684 ntBASIC5.15□□□□□ -1.59
CXCL1P09341 DDAH1-204ENST00000535924 3909 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
CXCL1P09341 CDC73-204ENST00000635846 3987 ntTSL 5 BASIC5.14□□□□□ -1.59
CXCL1P09341 TTC21B-201ENST00000243344 5482 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
CXCL1P09341 AC009831.5-201ENST00000624000 3189 ntBASIC5.14□□□□□ -1.59
CXCL1P09341 SLC1A3-215ENST00000612708 3832 ntTSL 5 BASIC5.14□□□□□ -1.59
CXCL1P09341 NBPF26-202ENST00000611287 2701 ntTSL 5 BASIC5.14□□□□□ -1.59
CXCL1P09341 NLN-202ENST00000502464 8354 ntTSL 5 BASIC5.14□□□□□ -1.59
CXCL1P09341 MTRF1-203ENST00000379480 2185 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
CXCL1P09341 SETDB2-205ENST00000611815 5313 ntAPPRIS ALT2 TSL 5 BASIC5.14□□□□□ -1.59
CXCL1P09341 ATP5BP1-201ENST00000411980 1574 ntBASIC5.14□□□□□ -1.59
CXCL1P09341 SNORA73B-201ENST00000363217 204 ntBASIC5.14□□□□□ -1.59
CXCL1P09341 RGS8-202ENST00000367556 843 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
CXCL1P09341 DEFB121-202ENST00000376314 389 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
CXCL1P09341 B4GALT6-203ENST00000383131 1239 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
CXCL1P09341 RNA5SP18-201ENST00000390935 121 ntBASIC5.14□□□□□ -1.59
CXCL1P09341 U3.23-201ENST00000391132 200 ntBASIC5.14□□□□□ -1.59
CXCL1P09341 RN7SKP85-201ENST00000411349 318 ntBASIC5.14□□□□□ -1.59
CXCL1P09341 AL355862.1-201ENST00000412705 353 ntBASIC5.14□□□□□ -1.59
CXCL1P09341 AP001043.1-203ENST00000415824 407 ntTSL 5 BASIC5.14□□□□□ -1.59
CXCL1P09341 AL354868.1-201ENST00000417077 482 ntBASIC5.14□□□□□ -1.59
CXCL1P09341 SMIM12-201ENST00000417239 684 ntAPPRIS P1 TSL 3 BASIC5.14□□□□□ -1.59
CXCL1P09341 AL158070.1-201ENST00000421614 631 ntTSL 2 BASIC5.14□□□□□ -1.59
CXCL1P09341 AL590399.2-201ENST00000427536 309 ntBASIC5.14□□□□□ -1.59
CXCL1P09341 ARPP21-217ENST00000436702 561 ntTSL 4 BASIC5.14□□□□□ -1.59
CXCL1P09341 AC079781.1-201ENST00000441505 394 ntBASIC5.14□□□□□ -1.59
CXCL1P09341 CRYGGP-201ENST00000443337 145 ntBASIC5.14□□□□□ -1.59
CXCL1P09341 LINC01789-202ENST00000455614 491 ntTSL 3 BASIC5.14□□□□□ -1.59
CXCL1P09341 AC108751.3-201ENST00000461814 1020 ntBASIC5.14□□□□□ -1.59
CXCL1P09341 AC129807.1-201ENST00000471614 591 ntTSL 4 BASIC5.14□□□□□ -1.59
CXCL1P09341 RN7SL685P-201ENST00000476271 298 ntBASIC5.14□□□□□ -1.59
CXCL1P09341 AC114728.1-201ENST00000488289 483 ntBASIC5.14□□□□□ -1.59
CXCL1P09341 LEMD1-208ENST00000495594 637 ntTSL 3 BASIC5.14□□□□□ -1.59
CXCL1P09341 AC112206.2-201ENST00000503106 557 ntTSL 4 BASIC5.14□□□□□ -1.59
CXCL1P09341 CC2D2A-207ENST00000507954 548 ntAPPRIS ALT2 TSL 2 BASIC5.14□□□□□ -1.59
CXCL1P09341 AP000873.4-201ENST00000528133 905 ntTSL 3 BASIC5.14□□□□□ -1.59
CXCL1P09341 AC135388.1-201ENST00000536512 353 ntTSL 5 BASIC5.14□□□□□ -1.59
CXCL1P09341 CCDC58P5-201ENST00000536923 432 ntBASIC5.14□□□□□ -1.59
CXCL1P09341 AC140118.1-201ENST00000539209 532 ntTSL 4 BASIC5.14□□□□□ -1.59
CXCL1P09341 AC027288.1-201ENST00000548359 816 ntTSL 3 BASIC5.14□□□□□ -1.59
CXCL1P09341 CYP4A26P-201ENST00000563017 196 ntBASIC5.14□□□□□ -1.59
CXCL1P09341 AL133410.1-201ENST00000574939 546 ntTSL 3 BASIC5.14□□□□□ -1.59
CXCL1P09341 AF001548.1-201ENST00000577048 550 ntTSL 4 BASIC5.14□□□□□ -1.59
CXCL1P09341 AC005837.2-201ENST00000587459 479 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
CXCL1P09341 ZNF649-AS1-201ENST00000600329 579 ntTSL 4 BASIC5.14□□□□□ -1.59
CXCL1P09341 AC015726.1-202ENST00000602532 475 ntTSL 5 BASIC5.14□□□□□ -1.59
CXCL1P09341 AC010333.3-201ENST00000615100 402 ntBASIC5.14□□□□□ -1.59
CXCL1P09341 CCL4L2-212ENST00000615418 954 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
CXCL1P09341 MIR6723-201ENST00000621981 89 ntBASIC5.14□□□□□ -1.59
CXCL1P09341 AC127071.1-201ENST00000624997 712 ntBASIC5.14□□□□□ -1.59
CXCL1P09341 NDRG3-202ENST00000359675 2917 ntAPPRIS ALT1 TSL 1 (best) BASIC5.14□□□□□ -1.59
CXCL1P09341 FBXO9-201ENST00000244426 4559 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
CXCL1P09341 AL359955.1-201ENST00000455242 3275 ntBASIC5.14□□□□□ -1.59
CXCL1P09341 STN1-202ENST00000369764 1311 ntAPPRIS P1 TSL 2 BASIC5.14□□□□□ -1.59
CXCL1P09341 RABGAP1L-218ENST00000489615 6821 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
CXCL1P09341 AAK1-203ENST00000409085 11345 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
CXCL1P09341 PNISR-202ENST00000438806 3142 ntAPPRIS P1 TSL 2 BASIC5.14□□□□□ -1.59
CXCL1P09341 PRR14L-201ENST00000327423 10826 ntAPPRIS P2 TSL 5 BASIC5.14□□□□□ -1.59
CXCL1P09341 GLRA2-204ENST00000443437 3182 ntTSL 2 BASIC5.14□□□□□ -1.59
CXCL1P09341 ALG10B-201ENST00000308742 10253 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
CXCL1P09341 GNRH1-201ENST00000276414 1760 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
CXCL1P09341 CAP1P2-201ENST00000417455 1409 ntBASIC5.14□□□□□ -1.59
CXCL1P09341 SELE-204ENST00000367776 3576 ntTSL 5 BASIC5.14□□□□□ -1.59
CXCL1P09341 SELE-205ENST00000367777 3576 ntTSL 5 BASIC5.14□□□□□ -1.59
CXCL1P09341 KCNMA1-AS1-202ENST00000429850 3566 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
CXCL1P09341 CNTNAP4-205ENST00000476707 4355 ntTSL 2 BASIC5.13□□□□□ -1.59
CXCL1P09341 KLHL2-210ENST00000538127 2907 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
CXCL1P09341 DCC-202ENST00000412726 9525 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
CXCL1P09341 DCP1B-205ENST00000540622 1547 ntTSL 5 BASIC5.13□□□□□ -1.59
CXCL1P09341 ADGRG2-203ENST00000356606 4630 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
CXCL1P09341 COL14A1-209ENST00000537875 3119 ntTSL 5 BASIC5.13□□□□□ -1.59
CXCL1P09341 NAPG-201ENST00000322897 3548 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
CXCL1P09341 DIO2-AS1-201ENST00000553979 1597 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
CXCL1P09341 AC137056.2-201ENST00000624055 1958 ntBASIC5.13□□□□□ -1.59
CXCL1P09341 DDX3Y-201ENST00000336079 4445 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
CXCL1P09341 DNAJC16-202ENST00000375847 6069 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
CXCL1P09341 BX284613.1-201ENST00000452221 1641 ntBASIC5.13□□□□□ -1.59
CXCL1P09341 BPIFC-203ENST00000397452 2091 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 99.5 ms