Protein–RNA interactions for Protein: Q9UBP4

DKK3, Dickkopf-related protein 3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DKK3Q9UBP4 LIN7C-201ENST00000278193 4688 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
DKK3Q9UBP4 ARF4-209ENST00000496292 1467 ntTSL 5 BASIC7.13□□□□□ -1.27
DKK3Q9UBP4 ZNF521-214ENST00000584787 4327 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
DKK3Q9UBP4 OR52N5-202ENST00000641181 2778 ntAPPRIS P1 BASIC7.13□□□□□ -1.27
DKK3Q9UBP4 REG1A-201ENST00000233735 808 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
DKK3Q9UBP4 CLECL1-201ENST00000327839 670 ntAPPRIS P3 TSL 1 (best) BASIC7.13□□□□□ -1.27
DKK3Q9UBP4 FUNDC2P3-201ENST00000334716 533 ntBASIC7.13□□□□□ -1.27
DKK3Q9UBP4 RPL7-201ENST00000352983 1101 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
DKK3Q9UBP4 IGFL2-201ENST00000377693 607 ntAPPRIS ALT2 TSL 1 (best) BASIC7.13□□□□□ -1.27
DKK3Q9UBP4 RBBP4P4-201ENST00000398588 1289 ntBASIC7.13□□□□□ -1.27
DKK3Q9UBP4 EEF1GP6-201ENST00000402309 905 ntBASIC7.13□□□□□ -1.27
DKK3Q9UBP4 UGT1A6-203ENST00000406651 785 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
DKK3Q9UBP4 RNA5SP280-201ENST00000411230 115 ntBASIC7.13□□□□□ -1.27
DKK3Q9UBP4 SETP10-201ENST00000424368 814 ntBASIC7.13□□□□□ -1.27
DKK3Q9UBP4 SNRPEP5-201ENST00000425442 278 ntBASIC7.13□□□□□ -1.27
DKK3Q9UBP4 CHCHD3P1-201ENST00000425516 676 ntBASIC7.13□□□□□ -1.27
DKK3Q9UBP4 AC114402.2-201ENST00000432760 643 ntBASIC7.13□□□□□ -1.27
DKK3Q9UBP4 FAM237A-201ENST00000441223 773 ntAPPRIS P1 TSL 2 BASIC7.13□□□□□ -1.27
DKK3Q9UBP4 AL356133.1-201ENST00000444762 372 ntBASIC7.13□□□□□ -1.27
DKK3Q9UBP4 LRRC28-203ENST00000447360 1235 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
DKK3Q9UBP4 AL500527.1-201ENST00000448532 255 ntBASIC7.13□□□□□ -1.27
DKK3Q9UBP4 TREML3P-201ENST00000457327 501 ntBASIC7.13□□□□□ -1.27
DKK3Q9UBP4 VN1R6P-201ENST00000458417 907 ntBASIC7.13□□□□□ -1.27
DKK3Q9UBP4 RN7SL160P-201ENST00000468558 284 ntBASIC7.13□□□□□ -1.27
DKK3Q9UBP4 NDUFB2-210ENST00000475276 539 ntTSL 4 BASIC7.13□□□□□ -1.27
DKK3Q9UBP4 OR9A1P-202ENST00000484361 945 ntBASIC7.13□□□□□ -1.27
DKK3Q9UBP4 AC055733.3-201ENST00000505214 523 ntBASIC7.13□□□□□ -1.27
DKK3Q9UBP4 CFI-204ENST00000510800 667 ntTSL 2 BASIC7.13□□□□□ -1.27
DKK3Q9UBP4 LINC02506-201ENST00000513211 734 ntTSL 3 BASIC7.13□□□□□ -1.27
DKK3Q9UBP4 SNORA81.2-201ENST00000516868 170 ntBASIC7.13□□□□□ -1.27
DKK3Q9UBP4 IGHVII-51-2-201ENST00000519778 259 ntBASIC7.13□□□□□ -1.27
DKK3Q9UBP4 AC079296.1-202ENST00000521394 960 ntTSL 4 BASIC7.13□□□□□ -1.27
DKK3Q9UBP4 PTTG3P-201ENST00000521862 606 ntBASIC7.13□□□□□ -1.27
DKK3Q9UBP4 NATP-201ENST00000523491 878 ntBASIC7.13□□□□□ -1.27
DKK3Q9UBP4 AC018845.1-201ENST00000564193 744 ntTSL 2 BASIC7.13□□□□□ -1.27
DKK3Q9UBP4 AC023389.2-201ENST00000580031 955 ntBASIC7.13□□□□□ -1.27
DKK3Q9UBP4 WDR45BP1-201ENST00000583470 1029 ntBASIC7.13□□□□□ -1.27
DKK3Q9UBP4 AC019131.1-201ENST00000583654 622 ntTSL 5 BASIC7.13□□□□□ -1.27
DKK3Q9UBP4 MIR5682-201ENST00000584864 76 ntBASIC7.13□□□□□ -1.27
DKK3Q9UBP4 AC011591.1-201ENST00000591379 518 ntTSL 2 BASIC7.13□□□□□ -1.27
DKK3Q9UBP4 AL591222.2-201ENST00000604443 754 ntBASIC7.13□□□□□ -1.27
DKK3Q9UBP4 AC104184.1-201ENST00000607513 721 ntBASIC7.13□□□□□ -1.27
DKK3Q9UBP4 RN7SL126P-201ENST00000616400 299 ntBASIC7.13□□□□□ -1.27
DKK3Q9UBP4 ATP13A5-205ENST00000620313 709 ntTSL 5 BASIC7.13□□□□□ -1.27
DKK3Q9UBP4 AC017037.4-201ENST00000624526 826 ntBASIC7.13□□□□□ -1.27
DKK3Q9UBP4 SPAG9-209ENST00000510283 4949 ntTSL 2 BASIC7.13□□□□□ -1.27
DKK3Q9UBP4 ZBTB21-205ENST00000398511 5608 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
DKK3Q9UBP4 LRMP-204ENST00000547044 2208 ntAPPRIS P2 TSL 1 (best) BASIC7.13□□□□□ -1.27
DKK3Q9UBP4 DIO2-210ENST00000557010 6367 ntAPPRIS P1 TSL 2 BASIC7.13□□□□□ -1.27
DKK3Q9UBP4 ZBTB21-204ENST00000398505 6846 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
DKK3Q9UBP4 ANLN-202ENST00000396068 4661 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
DKK3Q9UBP4 OR2L13-203ENST00000641893 1817 ntAPPRIS P1 BASIC7.13□□□□□ -1.27
DKK3Q9UBP4 PSG1-203ENST00000403380 1722 ntTSL 2 BASIC7.13□□□□□ -1.27
DKK3Q9UBP4 AC007114.2-201ENST00000576014 4281 ntBASIC7.13□□□□□ -1.27
DKK3Q9UBP4 AP000547.3-204ENST00000588548 2523 ntBASIC7.12□□□□□ -1.27
DKK3Q9UBP4 ERVFRD-1-201ENST00000472091 3198 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
DKK3Q9UBP4 ZNF770-201ENST00000356321 5439 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
DKK3Q9UBP4 LY75-201ENST00000263636 6886 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
DKK3Q9UBP4 AC099673.1-201ENST00000452199 2296 ntTSL 2 BASIC7.12□□□□□ -1.27
DKK3Q9UBP4 KCNJ15-220ENST00000612702 3046 ntAPPRIS P1 TSL 4 BASIC7.12□□□□□ -1.27
DKK3Q9UBP4 OR7G2-202ENST00000641081 3015 ntAPPRIS ALT2 BASIC7.12□□□□□ -1.27
DKK3Q9UBP4 ZSCAN4-201ENST00000318203 2246 ntAPPRIS P1 TSL 2 BASIC7.12□□□□□ -1.27
DKK3Q9UBP4 NBPF14-201ENST00000581201 2931 ntTSL 5 BASIC7.12□□□□□ -1.27
DKK3Q9UBP4 MPP7-201ENST00000337532 5080 ntAPPRIS P1 TSL 5 BASIC7.12□□□□□ -1.27
DKK3Q9UBP4 CHD6-203ENST00000373233 10818 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
DKK3Q9UBP4 NXF2B-203ENST00000604395 2143 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
DKK3Q9UBP4 NXF2-201ENST00000604790 2143 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
DKK3Q9UBP4 ADAL-203ENST00000428046 3514 ntTSL 2 BASIC7.12□□□□□ -1.27
DKK3Q9UBP4 LRRC39-202ENST00000370137 1396 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
DKK3Q9UBP4 GCNA-201ENST00000373695 3213 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
DKK3Q9UBP4 RDH11-203ENST00000553384 1926 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
DKK3Q9UBP4 HESX1-201ENST00000295934 981 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
DKK3Q9UBP4 MAPK14-203ENST00000310795 1066 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
DKK3Q9UBP4 AL451061.1-201ENST00000407887 862 ntBASIC7.12□□□□□ -1.27
DKK3Q9UBP4 SNORA11.3-201ENST00000408471 128 ntBASIC7.12□□□□□ -1.27
DKK3Q9UBP4 VN1R66P-201ENST00000412929 916 ntBASIC7.12□□□□□ -1.27
DKK3Q9UBP4 RPL17P17-201ENST00000419491 557 ntBASIC7.12□□□□□ -1.27
DKK3Q9UBP4 AC013410.2-201ENST00000422627 201 ntBASIC7.12□□□□□ -1.27
DKK3Q9UBP4 AL121916.1-201ENST00000429405 308 ntBASIC7.12□□□□□ -1.27
DKK3Q9UBP4 NDUFA5P8-201ENST00000449019 346 ntBASIC7.12□□□□□ -1.27
DKK3Q9UBP4 PRDX1P1-201ENST00000449329 596 ntBASIC7.12□□□□□ -1.27
DKK3Q9UBP4 RBMY3AP-201ENST00000449381 1145 ntBASIC7.12□□□□□ -1.27
DKK3Q9UBP4 AC007386.1-201ENST00000455212 582 ntBASIC7.12□□□□□ -1.27
DKK3Q9UBP4 RBMY2EP-202ENST00000456360 940 ntBASIC7.12□□□□□ -1.27
DKK3Q9UBP4 AC146944.2-201ENST00000504546 1073 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
DKK3Q9UBP4 MTND3P3-201ENST00000505004 126 ntBASIC7.12□□□□□ -1.27
DKK3Q9UBP4 AC139495.1-201ENST00000510264 1073 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
DKK3Q9UBP4 AC114940.1-201ENST00000512162 1265 ntBASIC7.12□□□□□ -1.27
DKK3Q9UBP4 RN7SKP11-201ENST00000517018 287 ntBASIC7.12□□□□□ -1.27
DKK3Q9UBP4 AC090193.1-202ENST00000524355 566 ntTSL 4 BASIC7.12□□□□□ -1.27
DKK3Q9UBP4 AC009656.1-201ENST00000531966 478 ntTSL 3 BASIC7.12□□□□□ -1.27
DKK3Q9UBP4 AC096708.2-201ENST00000577676 512 ntBASIC7.12□□□□□ -1.27
DKK3Q9UBP4 AC103810.5-201ENST00000581622 560 ntTSL 5 BASIC7.12□□□□□ -1.27
DKK3Q9UBP4 AC011824.1-201ENST00000584863 561 ntTSL 4 BASIC7.12□□□□□ -1.27
DKK3Q9UBP4 AC011476.3-203ENST00000586961 346 ntTSL 5 BASIC7.12□□□□□ -1.27
DKK3Q9UBP4 AC005479.3-201ENST00000602790 431 ntBASIC7.12□□□□□ -1.27
DKK3Q9UBP4 AP005329.3-201ENST00000609924 686 ntBASIC7.12□□□□□ -1.27
DKK3Q9UBP4 AC003001.2-201ENST00000616294 831 ntBASIC7.12□□□□□ -1.27
DKK3Q9UBP4 SNORA11.6-201ENST00000619030 128 ntBASIC7.12□□□□□ -1.27
DKK3Q9UBP4 AC091059.2-201ENST00000623355 614 ntBASIC7.12□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 81.2 ms