Protein–RNA interactions for Protein: Q9NPC3

CCNB1IP1, E3 ubiquitin-protein ligase CCNB1IP1, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNB1IP1Q9NPC3 AL021707.2-202ENST00000422408 1080 ntTSL 3 BASIC6.3□□□□□ -1.4
CCNB1IP1Q9NPC3 OR5P4P-201ENST00000424698 917 ntBASIC6.3□□□□□ -1.4
CCNB1IP1Q9NPC3 AL121902.1-201ENST00000426963 459 ntTSL 2 BASIC6.3□□□□□ -1.4
CCNB1IP1Q9NPC3 AL357314.1-201ENST00000433521 806 ntTSL 3 BASIC6.3□□□□□ -1.4
CCNB1IP1Q9NPC3 ATP5LP4-201ENST00000434169 307 ntBASIC6.3□□□□□ -1.4
CCNB1IP1Q9NPC3 ST13P2-201ENST00000438916 1109 ntBASIC6.3□□□□□ -1.4
CCNB1IP1Q9NPC3 FREM2-AS1-201ENST00000448887 465 ntTSL 2 BASIC6.3□□□□□ -1.4
CCNB1IP1Q9NPC3 AL358612.1-201ENST00000452911 481 ntTSL 3 BASIC6.3□□□□□ -1.4
CCNB1IP1Q9NPC3 AADACP1-204ENST00000483636 1285 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
CCNB1IP1Q9NPC3 AC010230.1-201ENST00000514115 443 ntTSL 3 BASIC6.3□□□□□ -1.4
CCNB1IP1Q9NPC3 RERG-AS1-201ENST00000541243 337 ntTSL 2 BASIC6.3□□□□□ -1.4
CCNB1IP1Q9NPC3 AL117192.1-204ENST00000553485 449 ntTSL 2 BASIC6.3□□□□□ -1.4
CCNB1IP1Q9NPC3 AC022405.1-201ENST00000559841 516 ntTSL 3 BASIC6.3□□□□□ -1.4
CCNB1IP1Q9NPC3 ADAMTS7P4-205ENST00000560651 453 ntTSL 3 BASIC6.3□□□□□ -1.4
CCNB1IP1Q9NPC3 AC027801.5-201ENST00000574365 416 ntTSL 3 BASIC6.3□□□□□ -1.4
CCNB1IP1Q9NPC3 AC011824.1-201ENST00000584863 561 ntTSL 4 BASIC6.3□□□□□ -1.4
CCNB1IP1Q9NPC3 AC006116.6-201ENST00000593258 1103 ntBASIC6.3□□□□□ -1.4
CCNB1IP1Q9NPC3 HBG1-202ENST00000632727 369 ntTSL 3 BASIC6.3□□□□□ -1.4
CCNB1IP1Q9NPC3 AC063952.1-203ENST00000634410 658 ntBASIC6.3□□□□□ -1.4
CCNB1IP1Q9NPC3 CCDC196-207ENST00000636229 1107 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
CCNB1IP1Q9NPC3 GOSR2-222ENST00000639031 885 ntTSL 3 BASIC6.3□□□□□ -1.4
CCNB1IP1Q9NPC3 AC015969.1-201ENST00000366218 1416 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
CCNB1IP1Q9NPC3 LPAR6-201ENST00000345941 2428 ntAPPRIS P1 TSL 2 BASIC6.3□□□□□ -1.4
CCNB1IP1Q9NPC3 SCYL3-201ENST00000367770 2916 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
CCNB1IP1Q9NPC3 ERG-202ENST00000398897 4651 ntTSL 5 BASIC6.3□□□□□ -1.4
CCNB1IP1Q9NPC3 HECTD4-211ENST00000550722 15450 ntAPPRIS ALT2 TSL 5 BASIC6.3□□□□□ -1.4
CCNB1IP1Q9NPC3 ERMARD-202ENST00000366772 2003 ntTSL 5 BASIC6.3□□□□□ -1.4
CCNB1IP1Q9NPC3 SOX5-205ENST00000451604 4261 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
CCNB1IP1Q9NPC3 CPB2-AS1-202ENST00000606243 2185 ntTSL 2 BASIC6.3□□□□□ -1.4
CCNB1IP1Q9NPC3 ZNF160-202ENST00000418871 4219 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
CCNB1IP1Q9NPC3 AC068389.1-202ENST00000526470 3564 ntTSL 2 BASIC6.29□□□□□ -1.4
CCNB1IP1Q9NPC3 SCN1A-203ENST00000409050 5946 ntTSL 5 BASIC6.29□□□□□ -1.4
CCNB1IP1Q9NPC3 ZNF283-203ENST00000588797 2428 ntTSL 2 BASIC6.29□□□□□ -1.4
CCNB1IP1Q9NPC3 TM9SF4-202ENST00000398022 3978 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
CCNB1IP1Q9NPC3 GOT2P1-201ENST00000440922 1309 ntBASIC6.29□□□□□ -1.4
CCNB1IP1Q9NPC3 STK32A-202ENST00000397936 5393 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
CCNB1IP1Q9NPC3 OSBPL9-203ENST00000428468 2893 ntAPPRIS P3 TSL 1 (best) BASIC6.29□□□□□ -1.4
CCNB1IP1Q9NPC3 BNC1-202ENST00000569704 3169 ntAPPRIS ALT2 TSL 5 BASIC6.29□□□□□ -1.4
CCNB1IP1Q9NPC3 ZC3H11A-204ENST00000367214 3451 ntAPPRIS P1 TSL 2 BASIC6.29□□□□□ -1.4
CCNB1IP1Q9NPC3 ALG10-201ENST00000266483 3128 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
CCNB1IP1Q9NPC3 ACPP-201ENST00000336375 3125 ntAPPRIS P3 TSL 1 (best) BASIC6.29□□□□□ -1.4
CCNB1IP1Q9NPC3 C16orf87-202ENST00000394806 6640 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
CCNB1IP1Q9NPC3 HNRNPCL4-201ENST00000323770 882 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
CCNB1IP1Q9NPC3 RPSAP44-201ENST00000406712 884 ntBASIC6.29□□□□□ -1.4
CCNB1IP1Q9NPC3 TYMSP1-201ENST00000407851 869 ntBASIC6.29□□□□□ -1.4
CCNB1IP1Q9NPC3 UNC50-203ENST00000409347 1276 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
CCNB1IP1Q9NPC3 AC012451.1-201ENST00000412312 357 ntTSL 3 BASIC6.29□□□□□ -1.4
CCNB1IP1Q9NPC3 BX284668.3-201ENST00000414128 882 ntTSL 5 BASIC6.29□□□□□ -1.4
CCNB1IP1Q9NPC3 LINC01820-201ENST00000418415 570 ntTSL 2 BASIC6.29□□□□□ -1.4
CCNB1IP1Q9NPC3 CLCN3P1-201ENST00000423965 1017 ntBASIC6.29□□□□□ -1.4
CCNB1IP1Q9NPC3 VDAC2P3-201ENST00000430995 828 ntBASIC6.29□□□□□ -1.4
CCNB1IP1Q9NPC3 AP001469.2-201ENST00000444966 390 ntTSL 5 BASIC6.29□□□□□ -1.4
CCNB1IP1Q9NPC3 AC083864.2-201ENST00000446024 482 ntTSL 3 BASIC6.29□□□□□ -1.4
CCNB1IP1Q9NPC3 RPSAP7-201ENST00000456871 885 ntBASIC6.29□□□□□ -1.4
CCNB1IP1Q9NPC3 ESRRG-212ENST00000463665 3359 ntTSL 2 BASIC6.29□□□□□ -1.4
CCNB1IP1Q9NPC3 RN7SL561P-201ENST00000488553 281 ntBASIC6.29□□□□□ -1.4
CCNB1IP1Q9NPC3 AC110772.1-201ENST00000503037 474 ntTSL 3 BASIC6.29□□□□□ -1.4
CCNB1IP1Q9NPC3 RPS23-208ENST00000512493 443 ntTSL 3 BASIC6.29□□□□□ -1.4
CCNB1IP1Q9NPC3 AC226119.1-201ENST00000514073 682 ntTSL 3 BASIC6.29□□□□□ -1.4
CCNB1IP1Q9NPC3 AC122713.1-201ENST00000518368 1015 ntBASIC6.29□□□□□ -1.4
CCNB1IP1Q9NPC3 AC083973.1-201ENST00000523459 590 ntTSL 2 BASIC6.29□□□□□ -1.4
CCNB1IP1Q9NPC3 AP005436.1-201ENST00000531454 488 ntTSL 2 BASIC6.29□□□□□ -1.4
CCNB1IP1Q9NPC3 NDUFA3P4-201ENST00000560814 250 ntBASIC6.29□□□□□ -1.4
CCNB1IP1Q9NPC3 AC093278.2-201ENST00000564956 2485 ntBASIC6.29□□□□□ -1.4
CCNB1IP1Q9NPC3 EEF1B2P1-201ENST00000567221 672 ntBASIC6.29□□□□□ -1.4
CCNB1IP1Q9NPC3 PWRN1-212ENST00000569908 1435 ntBASIC6.29□□□□□ -1.4
CCNB1IP1Q9NPC3 MIR4685-201ENST00000578185 69 ntBASIC6.29□□□□□ -1.4
CCNB1IP1Q9NPC3 AL953862.2-201ENST00000603089 820 ntBASIC6.29□□□□□ -1.4
CCNB1IP1Q9NPC3 AL050403.2-202ENST00000603462 492 ntTSL 5 BASIC6.29□□□□□ -1.4
CCNB1IP1Q9NPC3 AC007731.1-202ENST00000610338 1870 ntTSL 5 BASIC6.29□□□□□ -1.4
CCNB1IP1Q9NPC3 AL139123.1-201ENST00000612008 430 ntBASIC6.29□□□□□ -1.4
CCNB1IP1Q9NPC3 MIR6726-201ENST00000613751 61 ntBASIC6.29□□□□□ -1.4
CCNB1IP1Q9NPC3 TCL6_3.1-201ENST00000619064 137 ntBASIC6.29□□□□□ -1.4
CCNB1IP1Q9NPC3 AC110079.2-202ENST00000629093 698 ntTSL 3 BASIC6.29□□□□□ -1.4
CCNB1IP1Q9NPC3 AJ009632.2-208ENST00000635525 4123 ntTSL 5 BASIC6.29□□□□□ -1.4
CCNB1IP1Q9NPC3 CALN1-203ENST00000395276 9189 ntAPPRIS P3 TSL 1 (best) BASIC6.29□□□□□ -1.4
CCNB1IP1Q9NPC3 ZNF813-201ENST00000396403 6151 ntAPPRIS P1 TSL 3 BASIC6.29□□□□□ -1.4
CCNB1IP1Q9NPC3 UNC5C-205ENST00000610318 9403 ntTSL 5 BASIC6.29□□□□□ -1.4
CCNB1IP1Q9NPC3 ZMYND11-204ENST00000381604 4066 ntTSL 5 BASIC6.29□□□□□ -1.4
CCNB1IP1Q9NPC3 DPY19L1P1-201ENST00000417811 2594 ntBASIC6.29□□□□□ -1.4
CCNB1IP1Q9NPC3 AMZ2-206ENST00000577985 2257 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
CCNB1IP1Q9NPC3 NBPF19-205ENST00000612881 3715 ntTSL 5 BASIC6.29□□□□□ -1.4
CCNB1IP1Q9NPC3 PHC3-214ENST00000494943 5030 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
CCNB1IP1Q9NPC3 AP000547.3-204ENST00000588548 2523 ntBASIC6.29□□□□□ -1.4
CCNB1IP1Q9NPC3 RPE65-201ENST00000262340 2610 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
CCNB1IP1Q9NPC3 KLHL41-201ENST00000284669 2464 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
CCNB1IP1Q9NPC3 CBWD6-203ENST00000456520 1608 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
CCNB1IP1Q9NPC3 AASDH-203ENST00000502617 3004 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
CCNB1IP1Q9NPC3 KYNUP2-201ENST00000582280 1329 ntBASIC6.28□□□□□ -1.4
CCNB1IP1Q9NPC3 LRRC37A3-203ENST00000339474 2589 ntTSL 2 BASIC6.28□□□□□ -1.4
CCNB1IP1Q9NPC3 HECW2-201ENST00000260983 11809 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
CCNB1IP1Q9NPC3 IFIT1-202ENST00000546318 4613 ntTSL 3 BASIC6.28□□□□□ -1.4
CCNB1IP1Q9NPC3 MAGI2-222ENST00000636039 5671 ntTSL 5 BASIC6.28□□□□□ -1.4
CCNB1IP1Q9NPC3 TTLL5-217ENST00000556893 3071 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
CCNB1IP1Q9NPC3 TTC39B-207ENST00000507993 1950 ntAPPRIS ALT2 TSL 2 BASIC6.28□□□□□ -1.4
CCNB1IP1Q9NPC3 MPDZ-219ENST00000546205 6342 ntAPPRIS ALT2 TSL 5 BASIC6.28□□□□□ -1.4
CCNB1IP1Q9NPC3 OXCT1-204ENST00000509987 1441 ntTSL 2 BASIC6.28□□□□□ -1.4
CCNB1IP1Q9NPC3 SPAG6-209ENST00000538630 2376 ntTSL 5 BASIC6.28□□□□□ -1.4
CCNB1IP1Q9NPC3 GUCY2C-201ENST00000261170 3844 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
CCNB1IP1Q9NPC3 CTSL3P-201ENST00000354530 657 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 95.6 ms