Protein–RNA interactions for Protein: Q9C0C7

AMBRA1, Activating molecule in BECN1-regulated autophagy protein 1, humanhuman

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1Q9C0C7 ZNF107-206ENST00000620827 5685 ntAPPRIS P4 TSL 4 BASIC6.63□□□□□ -1.35
AMBRA1Q9C0C7 DRP2-204ENST00000538510 6852 ntAPPRIS P3 TSL 2 BASIC6.63□□□□□ -1.35
AMBRA1Q9C0C7 PSMA3-201ENST00000216455 970 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
AMBRA1Q9C0C7 YPEL5-201ENST00000261353 2182 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
AMBRA1Q9C0C7 PLCZ1-201ENST00000266505 2148 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
AMBRA1Q9C0C7 PIP-201ENST00000291009 585 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
AMBRA1Q9C0C7 SULT1C3-201ENST00000329106 915 ntAPPRIS P1 TSL 2 BASIC6.63□□□□□ -1.35
AMBRA1Q9C0C7 UQCR10-201ENST00000330029 916 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
AMBRA1Q9C0C7 ZNF438-201ENST00000331737 3243 ntAPPRIS ALT2 TSL 1 (best) BASIC6.63□□□□□ -1.35
AMBRA1Q9C0C7 RTN4-203ENST00000357376 4110 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
AMBRA1Q9C0C7 ALOX5AP-201ENST00000380490 904 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
AMBRA1Q9C0C7 MIR27A-201ENST00000385073 78 ntBASIC6.63□□□□□ -1.35
AMBRA1Q9C0C7 AC006511.2-201ENST00000388966 660 ntBASIC6.63□□□□□ -1.35
AMBRA1Q9C0C7 A2ML1-AS2-201ENST00000394240 386 ntTSL 5 BASIC6.63□□□□□ -1.35
AMBRA1Q9C0C7 NRG4-201ENST00000394907 1159 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
AMBRA1Q9C0C7 AC113608.1-201ENST00000398740 305 ntBASIC6.63□□□□□ -1.35
AMBRA1Q9C0C7 AL139039.2-201ENST00000407436 479 ntBASIC6.63□□□□□ -1.35
AMBRA1Q9C0C7 SNORA11.5-201ENST00000408163 128 ntBASIC6.63□□□□□ -1.35
AMBRA1Q9C0C7 PLGLB1-202ENST00000409310 960 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
AMBRA1Q9C0C7 SETP22-201ENST00000412243 957 ntBASIC6.63□□□□□ -1.35
AMBRA1Q9C0C7 DDX10P2-201ENST00000417796 2614 ntBASIC6.63□□□□□ -1.35
AMBRA1Q9C0C7 WASF5P-205ENST00000428639 1455 ntBASIC6.63□□□□□ -1.35
AMBRA1Q9C0C7 CNOT4-206ENST00000428680 4642 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
AMBRA1Q9C0C7 G6PC2-204ENST00000429379 645 ntTSL 2 BASIC6.63□□□□□ -1.35
AMBRA1Q9C0C7 AL121916.1-201ENST00000429405 308 ntBASIC6.63□□□□□ -1.35
AMBRA1Q9C0C7 LINC00160-201ENST00000430635 693 ntTSL 5 BASIC6.63□□□□□ -1.35
AMBRA1Q9C0C7 SEMA3A-204ENST00000436949 2550 ntAPPRIS P1 TSL 5 BASIC6.63□□□□□ -1.35
AMBRA1Q9C0C7 PMS2P11-201ENST00000451831 574 ntBASIC6.63□□□□□ -1.35
AMBRA1Q9C0C7 LINC01611-203ENST00000454981 504 ntTSL 3 BASIC6.63□□□□□ -1.35
AMBRA1Q9C0C7 RN7SL259P-201ENST00000478499 253 ntBASIC6.63□□□□□ -1.35
AMBRA1Q9C0C7 RPS14P8-201ENST00000478778 369 ntBASIC6.63□□□□□ -1.35
AMBRA1Q9C0C7 AC109587.1-201ENST00000482368 962 ntTSL 3 BASIC6.63□□□□□ -1.35
AMBRA1Q9C0C7 AC092336.1-201ENST00000510562 415 ntTSL 3 BASIC6.63□□□□□ -1.35
AMBRA1Q9C0C7 RNU6-964P-201ENST00000516524 69 ntBASIC6.63□□□□□ -1.35
AMBRA1Q9C0C7 AP003696.1-201ENST00000519337 770 ntTSL 3 BASIC6.63□□□□□ -1.35
AMBRA1Q9C0C7 IGHVII-49-1-201ENST00000521760 224 ntBASIC6.63□□□□□ -1.35
AMBRA1Q9C0C7 AC016405.1-202ENST00000524348 758 ntTSL 3 BASIC6.63□□□□□ -1.35
AMBRA1Q9C0C7 AC134349.2-201ENST00000535136 910 ntBASIC6.63□□□□□ -1.35
AMBRA1Q9C0C7 ORMDL2-203ENST00000548974 671 ntAPPRIS P1 TSL 2 BASIC6.63□□□□□ -1.35
AMBRA1Q9C0C7 TGFBR1-208ENST00000550253 1538 ntTSL 2 BASIC6.63□□□□□ -1.35
AMBRA1Q9C0C7 AC126177.6-201ENST00000550420 1009 ntBASIC6.63□□□□□ -1.35
AMBRA1Q9C0C7 AL136298.1-201ENST00000557371 566 ntTSL 3 BASIC6.63□□□□□ -1.35
AMBRA1Q9C0C7 AL096869.1-201ENST00000557622 559 ntTSL 4 BASIC6.63□□□□□ -1.35
AMBRA1Q9C0C7 AC015818.6-201ENST00000584274 634 ntBASIC6.63□□□□□ -1.35
AMBRA1Q9C0C7 BNIP3P31-201ENST00000604515 566 ntBASIC6.63□□□□□ -1.35
AMBRA1Q9C0C7 AC243919.1-201ENST00000613086 785 ntTSL 5 BASIC6.63□□□□□ -1.35
AMBRA1Q9C0C7 AC245033.2-201ENST00000621893 421 ntTSL 3 BASIC6.63□□□□□ -1.35
AMBRA1Q9C0C7 Metazoa_SRP.106-201ENST00000622471 296 ntBASIC6.63□□□□□ -1.35
AMBRA1Q9C0C7 AL590396.3-201ENST00000636334 300 ntBASIC6.63□□□□□ -1.35
AMBRA1Q9C0C7 ATF6-201ENST00000367942 7496 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
AMBRA1Q9C0C7 CDC73-204ENST00000635846 3987 ntTSL 5 BASIC6.63□□□□□ -1.35
AMBRA1Q9C0C7 BTN3A2-201ENST00000356386 3017 ntAPPRIS P3 TSL 5 BASIC6.63□□□□□ -1.35
AMBRA1Q9C0C7 SORBS1-209ENST00000371245 2779 ntAPPRIS ALT2 TSL 1 (best) BASIC6.63□□□□□ -1.35
AMBRA1Q9C0C7 AC126323.2-201ENST00000559985 2369 ntTSL 5 BASIC6.62□□□□□ -1.35
AMBRA1Q9C0C7 KIAA1958-203ENST00000536272 7650 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
AMBRA1Q9C0C7 NOX1-201ENST00000217885 1734 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
AMBRA1Q9C0C7 CCDC93-201ENST00000319432 6896 ntAPPRIS ALT1 TSL 5 BASIC6.62□□□□□ -1.35
AMBRA1Q9C0C7 CCDC93-202ENST00000376300 6899 ntAPPRIS P2 TSL 1 (best) BASIC6.62□□□□□ -1.35
AMBRA1Q9C0C7 ARPP21-201ENST00000187397 3433 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
AMBRA1Q9C0C7 SMC1A-201ENST00000322213 9784 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
AMBRA1Q9C0C7 AC100858.3-201ENST00000533516 1605 ntTSL 5 BASIC6.62□□□□□ -1.35
AMBRA1Q9C0C7 NUMB-204ENST00000535282 3198 ntAPPRIS ALT1 TSL 5 BASIC6.62□□□□□ -1.35
AMBRA1Q9C0C7 GPR1-203ENST00000437420 1557 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
AMBRA1Q9C0C7 ASNS-214ENST00000455086 1588 ntTSL 2 BASIC6.62□□□□□ -1.35
AMBRA1Q9C0C7 SORBS1-203ENST00000354106 3015 ntAPPRIS ALT2 TSL 5 BASIC6.62□□□□□ -1.35
AMBRA1Q9C0C7 SLC25A12-202ENST00000422440 2979 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
AMBRA1Q9C0C7 ELMOD2-201ENST00000323570 4409 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
AMBRA1Q9C0C7 ZNF559-212ENST00000592896 1488 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
AMBRA1Q9C0C7 GAS1RR-201ENST00000415801 4387 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
AMBRA1Q9C0C7 LYSMD3-201ENST00000315948 4259 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
AMBRA1Q9C0C7 ECI2-204ENST00000380125 1405 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
AMBRA1Q9C0C7 AL606490.2-201ENST00000457562 1330 ntBASIC6.62□□□□□ -1.35
AMBRA1Q9C0C7 GNG13-201ENST00000248150 984 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
AMBRA1Q9C0C7 NR1I3-203ENST00000367981 1076 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
AMBRA1Q9C0C7 RN7SKP62-201ENST00000384539 329 ntBASIC6.62□□□□□ -1.35
AMBRA1Q9C0C7 RBBP4P5-201ENST00000398583 1266 ntBASIC6.62□□□□□ -1.35
AMBRA1Q9C0C7 RPSAP44-201ENST00000406712 884 ntBASIC6.62□□□□□ -1.35
AMBRA1Q9C0C7 RN7SKP199-201ENST00000410325 305 ntBASIC6.62□□□□□ -1.35
AMBRA1Q9C0C7 AL121781.1-201ENST00000419863 168 ntTSL 5 BASIC6.62□□□□□ -1.35
AMBRA1Q9C0C7 AC012560.1-202ENST00000421324 535 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
AMBRA1Q9C0C7 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC6.62□□□□□ -1.35
AMBRA1Q9C0C7 LINC01525-201ENST00000442182 511 ntTSL 2 BASIC6.62□□□□□ -1.35
AMBRA1Q9C0C7 PRDX1P1-201ENST00000449329 596 ntBASIC6.62□□□□□ -1.35
AMBRA1Q9C0C7 AC147651.1-201ENST00000453149 572 ntTSL 2 BASIC6.62□□□□□ -1.35
AMBRA1Q9C0C7 RPL36AP55-201ENST00000454114 305 ntBASIC6.62□□□□□ -1.35
AMBRA1Q9C0C7 AC013429.1-201ENST00000456604 422 ntBASIC6.62□□□□□ -1.35
AMBRA1Q9C0C7 RN7SL58P-201ENST00000473445 294 ntBASIC6.62□□□□□ -1.35
AMBRA1Q9C0C7 GLRX-203ENST00000505427 632 ntAPPRIS P1 TSL 2 BASIC6.62□□□□□ -1.35
AMBRA1Q9C0C7 PGAM4P2-201ENST00000512491 721 ntBASIC6.62□□□□□ -1.35
AMBRA1Q9C0C7 LINC02223-203ENST00000514771 781 ntTSL 5 BASIC6.62□□□□□ -1.35
AMBRA1Q9C0C7 AC110760.3-202ENST00000515177 371 ntBASIC6.62□□□□□ -1.35
AMBRA1Q9C0C7 MYL12A-202ENST00000536605 899 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
AMBRA1Q9C0C7 MGAT4C-206ENST00000552435 550 ntTSL 4 BASIC6.62□□□□□ -1.35
AMBRA1Q9C0C7 AC025423.4-201ENST00000553141 785 ntTSL 3 BASIC6.62□□□□□ -1.35
AMBRA1Q9C0C7 AL161752.1-201ENST00000557721 263 ntTSL 2 BASIC6.62□□□□□ -1.35
AMBRA1Q9C0C7 MYL12A-209ENST00000580887 899 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
AMBRA1Q9C0C7 TTN-AS1-215ENST00000585451 949 ntTSL 5 BASIC6.62□□□□□ -1.35
AMBRA1Q9C0C7 AC022916.2-201ENST00000590144 559 ntTSL 4 BASIC6.62□□□□□ -1.35
AMBRA1Q9C0C7 MIR663AHG-213ENST00000596767 837 ntTSL 5 BASIC6.62□□□□□ -1.35
AMBRA1Q9C0C7 LAMTOR5-207ENST00000602858 553 ntTSL 2 BASIC6.62□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 118.6 ms