Protein–RNA interactions for Protein: Q9BWW4

SSBP3, Single-stranded DNA-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 388 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3Q9BWW4 TPD52-213ENST00000520527 2638 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
SSBP3Q9BWW4 AC084782.1-201ENST00000564401 2465 ntBASIC6.37□□□□□ -1.39
SSBP3Q9BWW4 AC090198.1-201ENST00000518639 2355 ntTSL 5 BASIC6.37□□□□□ -1.39
SSBP3Q9BWW4 ERRFI1-202ENST00000467067 2097 ntTSL 2 BASIC6.37□□□□□ -1.39
SSBP3Q9BWW4 ZNF812P-202ENST00000536819 1890 ntTSL 2 BASIC6.37□□□□□ -1.39
SSBP3Q9BWW4 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC6.37□□□□□ -1.39
SSBP3Q9BWW4 A2ML1-201ENST00000299698 5274 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
SSBP3Q9BWW4 ADGRL3-207ENST00000507625 4843 ntAPPRIS ALT2 TSL 5 BASIC6.37□□□□□ -1.39
SSBP3Q9BWW4 AL161891.1-201ENST00000621575 4636 ntBASIC6.37□□□□□ -1.39
SSBP3Q9BWW4 GAS1RR-201ENST00000415801 4387 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
SSBP3Q9BWW4 AC104078.1-201ENST00000499292 1448 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
SSBP3Q9BWW4 CASC19-205ENST00000641013 1411 ntBASIC6.37□□□□□ -1.39
SSBP3Q9BWW4 AC009501.3-201ENST00000605001 1352 ntBASIC6.37□□□□□ -1.39
SSBP3Q9BWW4 PYROXD1-201ENST00000240651 4055 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
SSBP3Q9BWW4 NUP155-207ENST00000513532 4088 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
SSBP3Q9BWW4 OR1C1-201ENST00000408896 1307 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
SSBP3Q9BWW4 PRLR-202ENST00000310101 1297 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
SSBP3Q9BWW4 Y_RNA.51-201ENST00000362725 102 ntBASIC6.37□□□□□ -1.39
SSBP3Q9BWW4 SNORA30B-201ENST00000365319 129 ntBASIC6.37□□□□□ -1.39
SSBP3Q9BWW4 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC6.37□□□□□ -1.39
SSBP3Q9BWW4 KCNAB1-202ENST00000389634 1119 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
SSBP3Q9BWW4 MRPS33-202ENST00000393008 853 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
SSBP3Q9BWW4 NHP2P2-201ENST00000396362 460 ntBASIC6.37□□□□□ -1.39
SSBP3Q9BWW4 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC6.37□□□□□ -1.39
SSBP3Q9BWW4 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC6.37□□□□□ -1.39
SSBP3Q9BWW4 HMGB1P49-201ENST00000418882 569 ntBASIC6.37□□□□□ -1.39
SSBP3Q9BWW4 AC023141.1-201ENST00000419418 379 ntBASIC6.37□□□□□ -1.39
SSBP3Q9BWW4 AC010145.1-201ENST00000422415 516 ntTSL 5 BASIC6.37□□□□□ -1.39
SSBP3Q9BWW4 ELOBP4-201ENST00000423418 296 ntBASIC6.37□□□□□ -1.39
SSBP3Q9BWW4 LINC01762-201ENST00000423907 454 ntTSL 5 BASIC6.37□□□□□ -1.39
SSBP3Q9BWW4 ETF1P1-206ENST00000427296 984 ntBASIC6.37□□□□□ -1.39
SSBP3Q9BWW4 LINC00160-201ENST00000430635 693 ntTSL 5 BASIC6.37□□□□□ -1.39
SSBP3Q9BWW4 ZNF965P-201ENST00000432501 817 ntBASIC6.37□□□□□ -1.39
SSBP3Q9BWW4 PTP4A1P3-201ENST00000433661 420 ntBASIC6.37□□□□□ -1.39
SSBP3Q9BWW4 OR5G3-201ENST00000435756 929 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
SSBP3Q9BWW4 AF127577.2-201ENST00000436429 824 ntTSL 3 BASIC6.37□□□□□ -1.39
SSBP3Q9BWW4 AC022816.1-201ENST00000436469 804 ntTSL 5 BASIC6.37□□□□□ -1.39
SSBP3Q9BWW4 AL592182.2-201ENST00000442477 858 ntTSL 2 BASIC6.37□□□□□ -1.39
SSBP3Q9BWW4 ARMC8P1-201ENST00000443069 1289 ntBASIC6.37□□□□□ -1.39
SSBP3Q9BWW4 TDRG1-202ENST00000448433 1015 ntTSL 3 BASIC6.37□□□□□ -1.39
SSBP3Q9BWW4 RPL7P55-201ENST00000450522 746 ntBASIC6.37□□□□□ -1.39
SSBP3Q9BWW4 AC092687.2-201ENST00000452909 568 ntTSL 5 BASIC6.37□□□□□ -1.39
SSBP3Q9BWW4 TCEAL4P1-201ENST00000453620 588 ntBASIC6.37□□□□□ -1.39
SSBP3Q9BWW4 LINC00489-201ENST00000457816 543 ntTSL 5 BASIC6.37□□□□□ -1.39
SSBP3Q9BWW4 AC108734.3-201ENST00000481241 1165 ntBASIC6.37□□□□□ -1.39
SSBP3Q9BWW4 AC104685.1-201ENST00000502445 371 ntBASIC6.37□□□□□ -1.39
SSBP3Q9BWW4 AC008629.3-201ENST00000505786 586 ntBASIC6.37□□□□□ -1.39
SSBP3Q9BWW4 AP002026.1-204ENST00000506454 749 ntTSL 3 BASIC6.37□□□□□ -1.39
SSBP3Q9BWW4 AC103833.1-201ENST00000517442 172 ntBASIC6.37□□□□□ -1.39
SSBP3Q9BWW4 AC100823.2-201ENST00000518337 699 ntBASIC6.37□□□□□ -1.39
SSBP3Q9BWW4 SUMO2P19-201ENST00000518920 295 ntBASIC6.37□□□□□ -1.39
SSBP3Q9BWW4 BTF3P1-201ENST00000522014 495 ntBASIC6.37□□□□□ -1.39
SSBP3Q9BWW4 AP003032.1-201ENST00000526730 277 ntTSL 3 BASIC6.37□□□□□ -1.39
SSBP3Q9BWW4 AP000435.1-201ENST00000528539 496 ntBASIC6.37□□□□□ -1.39
SSBP3Q9BWW4 AP001124.1-201ENST00000529628 385 ntBASIC6.37□□□□□ -1.39
SSBP3Q9BWW4 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC6.37□□□□□ -1.39
SSBP3Q9BWW4 ZDHHC20P3-201ENST00000531576 336 ntBASIC6.37□□□□□ -1.39
SSBP3Q9BWW4 AP004833.3-201ENST00000531893 322 ntBASIC6.37□□□□□ -1.39
SSBP3Q9BWW4 HHLA3-207ENST00000531950 541 ntAPPRIS ALT2 TSL 5 BASIC6.37□□□□□ -1.39
SSBP3Q9BWW4 AC008013.2-201ENST00000537555 348 ntTSL 5 BASIC6.37□□□□□ -1.39
SSBP3Q9BWW4 AC140118.1-201ENST00000539209 532 ntTSL 4 BASIC6.37□□□□□ -1.39
SSBP3Q9BWW4 AL671883.2-201ENST00000539514 536 ntTSL 4 BASIC6.37□□□□□ -1.39
SSBP3Q9BWW4 DUXAP6-201ENST00000553858 601 ntBASIC6.37□□□□□ -1.39
SSBP3Q9BWW4 AL162171.2-201ENST00000555444 905 ntTSL 3 BASIC6.37□□□□□ -1.39
SSBP3Q9BWW4 AL358332.1-201ENST00000555649 813 ntTSL 5 BASIC6.37□□□□□ -1.39
SSBP3Q9BWW4 AC092757.2-201ENST00000559026 633 ntTSL 4 BASIC6.37□□□□□ -1.39
SSBP3Q9BWW4 AL356801.1-201ENST00000559320 294 ntBASIC6.37□□□□□ -1.39
SSBP3Q9BWW4 AC105243.1-201ENST00000563172 1165 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
SSBP3Q9BWW4 AC005692.2-201ENST00000566521 596 ntTSL 3 BASIC6.37□□□□□ -1.39
SSBP3Q9BWW4 ZNF174-205ENST00000575752 1068 ntTSL 5 BASIC6.37□□□□□ -1.39
SSBP3Q9BWW4 HID1-AS1-201ENST00000577295 815 ntTSL 2 BASIC6.37□□□□□ -1.39
SSBP3Q9BWW4 AC135178.4-201ENST00000585275 548 ntTSL 2 BASIC6.37□□□□□ -1.39
SSBP3Q9BWW4 CCDC58P3-201ENST00000590792 430 ntBASIC6.37□□□□□ -1.39
SSBP3Q9BWW4 ZNF738-205ENST00000597810 747 ntAPPRIS ALT2 TSL 3 BASIC6.37□□□□□ -1.39
SSBP3Q9BWW4 AC005154.6-201ENST00000598361 687 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
SSBP3Q9BWW4 AC097467.3-216ENST00000599555 1293 ntTSL 5 BASIC6.37□□□□□ -1.39
SSBP3Q9BWW4 PRR13P3-201ENST00000603578 376 ntBASIC6.37□□□□□ -1.39
SSBP3Q9BWW4 AC093765.1-201ENST00000603758 881 ntBASIC6.37□□□□□ -1.39
SSBP3Q9BWW4 AL109936.2-201ENST00000605350 650 ntBASIC6.37□□□□□ -1.39
SSBP3Q9BWW4 AP002802.2-201ENST00000605877 235 ntBASIC6.37□□□□□ -1.39
SSBP3Q9BWW4 VIS1.1-201ENST00000610517 203 ntBASIC6.37□□□□□ -1.39
SSBP3Q9BWW4 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC6.37□□□□□ -1.39
SSBP3Q9BWW4 AL606760.4-201ENST00000617613 718 ntBASIC6.37□□□□□ -1.39
SSBP3Q9BWW4 AK6-205ENST00000618980 483 ntTSL 2 BASIC6.37□□□□□ -1.39
SSBP3Q9BWW4 AL035461.2-201ENST00000619201 524 ntBASIC6.37□□□□□ -1.39
SSBP3Q9BWW4 AC093875.1-201ENST00000623688 504 ntBASIC6.37□□□□□ -1.39
SSBP3Q9BWW4 AC092159.4-201ENST00000624944 550 ntBASIC6.37□□□□□ -1.39
SSBP3Q9BWW4 TTN-AS1-267ENST00000628826 662 ntTSL 5 BASIC6.37□□□□□ -1.39
SSBP3Q9BWW4 AC022167.5-202ENST00000637237 701 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
SSBP3Q9BWW4 AC099654.13-201ENST00000639774 207 ntBASIC6.37□□□□□ -1.39
SSBP3Q9BWW4 AC139713.2-210ENST00000641741 992 ntBASIC6.37□□□□□ -1.39
SSBP3Q9BWW4 TMTC2-204ENST00000549919 6211 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
SSBP3Q9BWW4 LMO3-208ENST00000441439 3515 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
SSBP3Q9BWW4 STXBP5-201ENST00000321680 3456 ntAPPRIS ALT1 TSL 5 BASIC6.37□□□□□ -1.39
SSBP3Q9BWW4 ARFGEF3-201ENST00000251691 14877 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
SSBP3Q9BWW4 MKL2-209ENST00000574045 3309 ntAPPRIS P3 TSL 1 (best) BASIC6.37□□□□□ -1.39
SSBP3Q9BWW4 POLA1-201ENST00000379059 5440 ntAPPRIS P3 TSL 1 (best) BASIC6.37□□□□□ -1.39
SSBP3Q9BWW4 POLA1-206ENST00000611764 5434 ntAPPRIS ALT2 TSL 5 BASIC6.37□□□□□ -1.39
SSBP3Q9BWW4 MMP25-AS1-206ENST00000573130 4434 ntTSL 2 BASIC6.37□□□□□ -1.39
SSBP3Q9BWW4 CTAGE1-201ENST00000391403 4313 ntAPPRIS P2 BASIC6.37□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 98.7 ms