Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 RETNLB-201ENST00000295755 676 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
LRCH3Q96II8 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC9.23□□□□□ -0.93
LRCH3Q96II8 OR4F5-201ENST00000335137 1054 ntAPPRIS P1 BASIC9.23□□□□□ -0.93
LRCH3Q96II8 RNA5SP483-201ENST00000363431 118 ntBASIC9.23□□□□□ -0.93
LRCH3Q96II8 MIR138-2-201ENST00000384916 84 ntBASIC9.23□□□□□ -0.93
LRCH3Q96II8 AL035419.1-201ENST00000397037 564 ntBASIC9.23□□□□□ -0.93
LRCH3Q96II8 AC099535.1-201ENST00000408928 371 ntBASIC9.23□□□□□ -0.93
LRCH3Q96II8 AL022329.1-201ENST00000412773 488 ntTSL 2 BASIC9.23□□□□□ -0.93
LRCH3Q96II8 MTCO3P12-201ENST00000416718 547 ntBASIC9.23□□□□□ -0.93
LRCH3Q96II8 CHL1-AS1-201ENST00000417612 913 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
LRCH3Q96II8 LINC00993-201ENST00000420453 540 ntBASIC9.23□□□□□ -0.93
LRCH3Q96II8 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC9.23□□□□□ -0.93
LRCH3Q96II8 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC9.23□□□□□ -0.93
LRCH3Q96II8 CLYBL-AS2-201ENST00000430125 695 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
LRCH3Q96II8 AC008072.1-201ENST00000434254 824 ntBASIC9.23□□□□□ -0.93
LRCH3Q96II8 AC006978.2-201ENST00000442800 666 ntAPPRIS P1 TSL 3 BASIC9.23□□□□□ -0.93
LRCH3Q96II8 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC9.23□□□□□ -0.93
LRCH3Q96II8 HIST1H2APS6-201ENST00000448609 364 ntBASIC9.23□□□□□ -0.93
LRCH3Q96II8 RHEBP1-201ENST00000448647 556 ntBASIC9.23□□□□□ -0.93
LRCH3Q96II8 RPS6P25-201ENST00000464444 748 ntBASIC9.23□□□□□ -0.93
LRCH3Q96II8 AC026787.1-201ENST00000504182 420 ntTSL 5 BASIC9.23□□□□□ -0.93
LRCH3Q96II8 AC147055.4-201ENST00000504399 745 ntBASIC9.23□□□□□ -0.93
LRCH3Q96II8 MTCYBP43-201ENST00000513621 740 ntBASIC9.23□□□□□ -0.93
LRCH3Q96II8 AC104109.4-202ENST00000518409 1082 ntTSL 2 BASIC9.23□□□□□ -0.93
LRCH3Q96II8 DCAF13-203ENST00000519682 837 ntTSL 2 BASIC9.23□□□□□ -0.93
LRCH3Q96II8 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC9.23□□□□□ -0.93
LRCH3Q96II8 CASP1-206ENST00000526568 1061 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
LRCH3Q96II8 RAB30-205ENST00000527633 792 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
LRCH3Q96II8 RAB30-209ENST00000532548 644 ntTSL 3 BASIC9.23□□□□□ -0.93
LRCH3Q96II8 LRTOMT-217ENST00000539587 428 ntTSL 2 BASIC9.23□□□□□ -0.93
LRCH3Q96II8 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC9.23□□□□□ -0.93
LRCH3Q96II8 EIF4A1P9-201ENST00000576035 1207 ntBASIC9.23□□□□□ -0.93
LRCH3Q96II8 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC9.23□□□□□ -0.93
LRCH3Q96II8 LINC02028-206ENST00000593326 810 ntTSL 5 BASIC9.23□□□□□ -0.93
LRCH3Q96II8 AC020915.3-201ENST00000595301 550 ntTSL 5 BASIC9.23□□□□□ -0.93
LRCH3Q96II8 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC9.23□□□□□ -0.93
LRCH3Q96II8 C1orf186-208ENST00000603378 614 ntTSL 3 BASIC9.23□□□□□ -0.93
LRCH3Q96II8 RNF219-AS1-213ENST00000607860 577 ntTSL 4 BASIC9.23□□□□□ -0.93
LRCH3Q96II8 AL592148.2-201ENST00000612210 372 ntBASIC9.23□□□□□ -0.93
LRCH3Q96II8 MIR6813-201ENST00000621638 56 ntBASIC9.23□□□□□ -0.93
LRCH3Q96II8 LINC01440-208ENST00000627300 699 ntTSL 5 BASIC9.23□□□□□ -0.93
LRCH3Q96II8 AC012594.1-254ENST00000628002 438 ntTSL 5 BASIC9.23□□□□□ -0.93
LRCH3Q96II8 AL355480.1-201ENST00000629041 99 ntBASIC9.23□□□□□ -0.93
LRCH3Q96II8 AL590644.1-202ENST00000634972 590 ntTSL 3 BASIC9.23□□□□□ -0.93
LRCH3Q96II8 LINC00595-215ENST00000635422 651 ntTSL 5 BASIC9.23□□□□□ -0.93
LRCH3Q96II8 AL009172.2-201ENST00000638776 717 ntTSL 5 BASIC9.23□□□□□ -0.93
LRCH3Q96II8 AC092329.4-205ENST00000638822 574 ntTSL 3 BASIC9.23□□□□□ -0.93
LRCH3Q96II8 FHL2-207ENST00000409177 4881 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
LRCH3Q96II8 AC074281.1-201ENST00000436419 2081 ntBASIC9.23□□□□□ -0.93
LRCH3Q96II8 EIF4BP6-201ENST00000431936 1828 ntBASIC9.23□□□□□ -0.93
LRCH3Q96II8 ENPP6-201ENST00000296741 3936 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
LRCH3Q96II8 SVOP-205ENST00000610966 6813 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
LRCH3Q96II8 GJA5-202ENST00000579774 3181 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
LRCH3Q96II8 C6orf163-202ENST00000388923 1308 ntAPPRIS P1 TSL 5 BASIC9.23□□□□□ -0.93
LRCH3Q96II8 STMND1-203ENST00000536551 1322 ntAPPRIS P1 TSL 5 BASIC9.23□□□□□ -0.93
LRCH3Q96II8 CEP135-201ENST00000257287 5562 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
LRCH3Q96II8 HAUS6-201ENST00000380496 3756 ntTSL 2 BASIC9.23□□□□□ -0.93
LRCH3Q96II8 NVL-216ENST00000482491 3003 ntTSL 5 BASIC9.23□□□□□ -0.93
LRCH3Q96II8 AC010320.4-201ENST00000594379 1905 ntTSL 2 BASIC9.23□□□□□ -0.93
LRCH3Q96II8 AC137056.2-201ENST00000624055 1958 ntBASIC9.23□□□□□ -0.93
LRCH3Q96II8 FZD10-AS1-201ENST00000505807 10193 ntTSL 2 BASIC9.23□□□□□ -0.93
LRCH3Q96II8 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC9.22□□□□□ -0.93
LRCH3Q96II8 RSL1D1-204ENST00000571133 5483 ntAPPRIS P2 TSL 1 (best) BASIC9.22□□□□□ -0.93
LRCH3Q96II8 AC114980.1-201ENST00000505668 3157 ntBASIC9.22□□□□□ -0.93
LRCH3Q96II8 C8orf44-SGK3-201ENST00000519289 2949 ntAPPRIS P1 TSL 2 BASIC9.22□□□□□ -0.93
LRCH3Q96II8 LRRC37BP1-203ENST00000417404 4742 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
LRCH3Q96II8 MNDA-201ENST00000368141 1752 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
LRCH3Q96II8 AL079343.1-201ENST00000572358 1771 ntBASIC9.22□□□□□ -0.93
LRCH3Q96II8 TMEM150C-204ENST00000515780 3296 ntAPPRIS P1 TSL 2 BASIC9.22□□□□□ -0.93
LRCH3Q96II8 AC022507.1-201ENST00000548349 1505 ntBASIC9.22□□□□□ -0.93
LRCH3Q96II8 ZNF833P-202ENST00000635221 1540 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
LRCH3Q96II8 PPP1R14D-201ENST00000299174 757 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
LRCH3Q96II8 OR4A16-201ENST00000314721 1081 ntAPPRIS P1 BASIC9.22□□□□□ -0.93
LRCH3Q96II8 NAP1L4P1-201ENST00000319092 1157 ntBASIC9.22□□□□□ -0.93
LRCH3Q96II8 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC9.22□□□□□ -0.93
LRCH3Q96II8 MIR425-201ENST00000362162 87 ntBASIC9.22□□□□□ -0.93
LRCH3Q96II8 CFAP61-207ENST00000389656 776 ntAPPRIS ALT2 TSL 1 (best) BASIC9.22□□□□□ -0.93
LRCH3Q96II8 TRAV12-1-201ENST00000390433 340 ntAPPRIS P1 BASIC9.22□□□□□ -0.93
LRCH3Q96II8 RN7SKP58-201ENST00000411010 305 ntBASIC9.22□□□□□ -0.93
LRCH3Q96II8 PROX1-AS1-201ENST00000413560 496 ntTSL 5 BASIC9.22□□□□□ -0.93
LRCH3Q96II8 AC126124.1-201ENST00000426104 185 ntBASIC9.22□□□□□ -0.93
LRCH3Q96II8 PPP1R14D-202ENST00000427255 747 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
LRCH3Q96II8 TRIM60P16-201ENST00000444048 694 ntBASIC9.22□□□□□ -0.93
LRCH3Q96II8 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC9.22□□□□□ -0.93
LRCH3Q96II8 CDC42P2-201ENST00000448566 569 ntBASIC9.22□□□□□ -0.93
LRCH3Q96II8 WDR11-AS1-201ENST00000451706 1108 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
LRCH3Q96II8 AP000472.1-201ENST00000452500 530 ntTSL 2 BASIC9.22□□□□□ -0.93
LRCH3Q96II8 ATP5A1P7-201ENST00000453978 1279 ntBASIC9.22□□□□□ -0.93
LRCH3Q96II8 AC004692.2-201ENST00000457315 355 ntTSL 3 BASIC9.22□□□□□ -0.93
LRCH3Q96II8 RN7SL308P-201ENST00000464971 297 ntBASIC9.22□□□□□ -0.93
LRCH3Q96II8 AF186996.2-201ENST00000508347 907 ntBASIC9.22□□□□□ -0.93
LRCH3Q96II8 NAF1-205ENST00000509434 385 ntTSL 3 BASIC9.22□□□□□ -0.93
LRCH3Q96II8 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC9.22□□□□□ -0.93
LRCH3Q96II8 AC073023.1-201ENST00000522896 773 ntTSL 5 BASIC9.22□□□□□ -0.93
LRCH3Q96II8 AL163932.1-201ENST00000555776 542 ntTSL 4 BASIC9.22□□□□□ -0.93
LRCH3Q96II8 AL355836.1-201ENST00000555951 870 ntBASIC9.22□□□□□ -0.93
LRCH3Q96II8 VN1R65P-201ENST00000566443 808 ntBASIC9.22□□□□□ -0.93
LRCH3Q96II8 AC126773.1-201ENST00000569654 547 ntTSL 4 BASIC9.22□□□□□ -0.93
LRCH3Q96II8 LINC01900-202ENST00000584898 603 ntTSL 5 BASIC9.22□□□□□ -0.93
LRCH3Q96II8 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC9.22□□□□□ -0.93
Retrieved 100 of 98,524 protein–RNA pairs in 78.5 ms