Protein–RNA interactions for Protein: P61024

CKS1B, Cyclin-dependent kinases regulatory subunit 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP61024 KLHL13-202ENST00000371876 5331 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
CKS1BP61024 AL357556.1-201ENST00000421884 1388 ntBASIC4.81□□□□□ -1.64
CKS1BP61024 AJ009632.1-201ENST00000433588 1376 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
CKS1BP61024 SREK1IP1-204ENST00000513458 6876 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CKS1BP61024 ADAMTS9-AS2-201ENST00000460833 3691 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
CKS1BP61024 PIGN-239ENST00000639902 4439 ntTSL 5 BASIC4.81□□□□□ -1.64
CKS1BP61024 CCNC-204ENST00000482541 1704 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
CKS1BP61024 BIN2P2-201ENST00000503900 1303 ntBASIC4.81□□□□□ -1.64
CKS1BP61024 AC092451.3-201ENST00000625067 1343 ntBASIC4.81□□□□□ -1.64
CKS1BP61024 MAMDC2-AS1-202ENST00000414515 2097 ntTSL 5 BASIC4.81□□□□□ -1.64
CKS1BP61024 SLC22A25-201ENST00000306494 1692 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CKS1BP61024 VWC2L-201ENST00000312504 4610 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CKS1BP61024 DCAF13-210ENST00000618975 2038 ntTSL 2 BASIC4.81□□□□□ -1.64
CKS1BP61024 AC105749.1-201ENST00000631338 2008 ntBASIC4.81□□□□□ -1.64
CKS1BP61024 PIK3C2A-201ENST00000265970 8227 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CKS1BP61024 BTF3-201ENST00000335895 897 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CKS1BP61024 Metazoa_SRP.2-201ENST00000359385 269 ntBASIC4.81□□□□□ -1.64
CKS1BP61024 RNA5SP263-201ENST00000363376 128 ntBASIC4.81□□□□□ -1.64
CKS1BP61024 RNU6-1017P-201ENST00000363613 106 ntBASIC4.81□□□□□ -1.64
CKS1BP61024 RNA5SP238-201ENST00000365464 120 ntBASIC4.81□□□□□ -1.64
CKS1BP61024 RPL23A-203ENST00000394938 688 ntTSL 2 BASIC4.81□□□□□ -1.64
CKS1BP61024 AL451046.1-201ENST00000406097 534 ntBASIC4.81□□□□□ -1.64
CKS1BP61024 RN7SKP232-201ENST00000410170 290 ntBASIC4.81□□□□□ -1.64
CKS1BP61024 AC007091.1-201ENST00000412563 566 ntTSL 5 BASIC4.81□□□□□ -1.64
CKS1BP61024 RPL19P21-201ENST00000424919 591 ntBASIC4.81□□□□□ -1.64
CKS1BP61024 LINC01889-201ENST00000430692 668 ntTSL 5 BASIC4.81□□□□□ -1.64
CKS1BP61024 BACE2-IT1-201ENST00000433378 382 ntTSL 5 BASIC4.81□□□□□ -1.64
CKS1BP61024 AL451136.1-201ENST00000435399 325 ntBASIC4.81□□□□□ -1.64
CKS1BP61024 AL023584.1-201ENST00000437067 349 ntTSL 3 BASIC4.81□□□□□ -1.64
CKS1BP61024 RPE-210ENST00000438204 796 ntTSL 2 BASIC4.81□□□□□ -1.64
CKS1BP61024 AL031316.1-202ENST00000441672 449 ntTSL 3 BASIC4.81□□□□□ -1.64
CKS1BP61024 EFCAB14P1-201ENST00000442409 463 ntBASIC4.81□□□□□ -1.64
CKS1BP61024 AC005808.1-201ENST00000444112 381 ntTSL 2 BASIC4.81□□□□□ -1.64
CKS1BP61024 RPE-213ENST00000445268 668 ntTSL 5 BASIC4.81□□□□□ -1.64
CKS1BP61024 AL355483.3-201ENST00000446686 752 ntTSL 3 BASIC4.81□□□□□ -1.64
CKS1BP61024 AL590004.3-201ENST00000450255 443 ntTSL 5 BASIC4.81□□□□□ -1.64
CKS1BP61024 DBIL5P-202ENST00000453414 250 ntBASIC4.81□□□□□ -1.64
CKS1BP61024 CXCR6-203ENST00000457814 1184 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CKS1BP61024 AL049650.1-201ENST00000461548 823 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
CKS1BP61024 AC007003.1-201ENST00000472463 736 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
CKS1BP61024 AC120057.1-201ENST00000483947 663 ntBASIC4.81□□□□□ -1.64
CKS1BP61024 AC009153.1-201ENST00000485799 496 ntBASIC4.81□□□□□ -1.64
CKS1BP61024 RPL10P7-201ENST00000495649 625 ntBASIC4.81□□□□□ -1.64
CKS1BP61024 AC063943.2-201ENST00000495697 534 ntBASIC4.81□□□□□ -1.64
CKS1BP61024 NMNAT1P4-201ENST00000505598 840 ntBASIC4.81□□□□□ -1.64
CKS1BP61024 AC023886.1-201ENST00000506057 685 ntTSL 3 BASIC4.81□□□□□ -1.64
CKS1BP61024 PGAM4P2-201ENST00000512491 721 ntBASIC4.81□□□□□ -1.64
CKS1BP61024 ST13P6-201ENST00000522430 1102 ntBASIC4.81□□□□□ -1.64
CKS1BP61024 RGS5-220ENST00000528689 566 ntTSL 5 BASIC4.81□□□□□ -1.64
CKS1BP61024 NOVA1-209ENST00000547619 947 ntTSL 3 BASIC4.81□□□□□ -1.64
CKS1BP61024 AC145350.2-201ENST00000561541 821 ntTSL 5 BASIC4.81□□□□□ -1.64
CKS1BP61024 SAXO2-204ENST00000565432 811 ntAPPRIS ALT2 TSL 4 BASIC4.81□□□□□ -1.64
CKS1BP61024 AP003115.1-201ENST00000569849 463 ntBASIC4.81□□□□□ -1.64
CKS1BP61024 AC015853.3-201ENST00000570974 478 ntTSL 4 BASIC4.81□□□□□ -1.64
CKS1BP61024 MIR4642-201ENST00000583943 82 ntBASIC4.81□□□□□ -1.64
CKS1BP61024 AC015818.6-201ENST00000584274 634 ntBASIC4.81□□□□□ -1.64
CKS1BP61024 TTN-AS1-215ENST00000585451 949 ntTSL 5 BASIC4.81□□□□□ -1.64
CKS1BP61024 SIGLEC31P-201ENST00000594237 551 ntBASIC4.81□□□□□ -1.64
CKS1BP61024 AL583859.2-202ENST00000602311 505 ntTSL 5 BASIC4.81□□□□□ -1.64
CKS1BP61024 AC093495.1-212ENST00000630173 1162 ntTSL 5 BASIC4.81□□□□□ -1.64
CKS1BP61024 LINC01232-205ENST00000630421 1002 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
CKS1BP61024 AC134980.1-214ENST00000638815 687 ntTSL 5 BASIC4.81□□□□□ -1.64
CKS1BP61024 FBXW12-201ENST00000296438 1647 ntAPPRIS P3 TSL 1 (best) BASIC4.81□□□□□ -1.64
CKS1BP61024 SPRY1-201ENST00000339241 2348 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CKS1BP61024 AFF2-201ENST00000286437 12280 ntTSL 2 BASIC4.81□□□□□ -1.64
CKS1BP61024 AF287957.1-201ENST00000607368 1595 ntBASIC4.81□□□□□ -1.64
CKS1BP61024 PSD3-219ENST00000614430 6136 ntTSL 5 BASIC4.81□□□□□ -1.64
CKS1BP61024 AL355306.2-202ENST00000634380 2281 ntTSL 5 BASIC4.81□□□□□ -1.64
CKS1BP61024 DGKB-201ENST00000399322 6684 ntAPPRIS P2 TSL 5 BASIC4.81□□□□□ -1.64
CKS1BP61024 SLC26A7-210ENST00000617233 5257 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
CKS1BP61024 AL121949.2-201ENST00000403446 1548 ntBASIC4.81□□□□□ -1.64
CKS1BP61024 SERPINA9-205ENST00000448305 1520 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
CKS1BP61024 ANGPT1-206ENST00000520734 1526 ntTSL 2 BASIC4.81□□□□□ -1.64
CKS1BP61024 CADPS-220ENST00000613879 1804 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
CKS1BP61024 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC4.81□□□□□ -1.64
CKS1BP61024 C1orf27-201ENST00000287859 3792 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CKS1BP61024 CETN2-201ENST00000370277 1454 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CKS1BP61024 CREM-216ENST00000429130 1476 ntTSL 5 BASIC4.81□□□□□ -1.64
CKS1BP61024 RFC3-202ENST00000434425 1461 ntTSL 5 BASIC4.81□□□□□ -1.64
CKS1BP61024 TRIP12-204ENST00000389045 5355 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
CKS1BP61024 GVINP1-202ENST00000531871 7271 ntBASIC4.81□□□□□ -1.64
CKS1BP61024 KYNUP1-201ENST00000466683 1406 ntBASIC4.8□□□□□ -1.64
CKS1BP61024 AC025428.2-201ENST00000435367 2672 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CKS1BP61024 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
CKS1BP61024 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC4.8□□□□□ -1.64
CKS1BP61024 BUB1-202ENST00000409311 3287 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CKS1BP61024 NR5A2-203ENST00000367362 5086 ntAPPRIS P3 TSL 1 (best) BASIC4.8□□□□□ -1.64
CKS1BP61024 C2orf66-201ENST00000342506 1669 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
CKS1BP61024 PGM3-215ENST00000616566 5905 ntTSL 2 BASIC4.8□□□□□ -1.64
CKS1BP61024 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC4.8□□□□□ -1.64
CKS1BP61024 AC087045.3-201ENST00000623046 2468 ntBASIC4.8□□□□□ -1.64
CKS1BP61024 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC4.8□□□□□ -1.64
CKS1BP61024 AC087516.2-201ENST00000558963 3042 ntTSL 3 BASIC4.8□□□□□ -1.64
CKS1BP61024 MDM4-217ENST00000621032 5592 ntTSL 2 BASIC4.8□□□□□ -1.64
CKS1BP61024 GNG13-201ENST00000248150 984 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
CKS1BP61024 RN7SKP62-201ENST00000384539 329 ntBASIC4.8□□□□□ -1.64
CKS1BP61024 GRXCR1-201ENST00000399770 991 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
CKS1BP61024 USP16-204ENST00000399976 2963 ntAPPRIS P3 TSL 1 (best) BASIC4.8□□□□□ -1.64
CKS1BP61024 RFKP1-201ENST00000400940 428 ntBASIC4.8□□□□□ -1.64
CKS1BP61024 IGBP1-AS2-201ENST00000403371 513 ntTSL 3 BASIC4.8□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 77.9 ms