Protein–RNA interactions for Protein: P48742

LHX1, LIM/homeobox protein Lhx1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX1P48742 AC091304.4-201ENST00000565703 620 ntBASIC7.18□□□□□ -1.26
LHX1P48742 AC005546.1-201ENST00000591837 391 ntTSL 3 BASIC7.18□□□□□ -1.26
LHX1P48742 AC012175.1-201ENST00000603755 531 ntBASIC7.18□□□□□ -1.26
LHX1P48742 Z98949.1-217ENST00000609275 994 ntTSL 5 BASIC7.18□□□□□ -1.26
LHX1P48742 EDRF1-AS1-210ENST00000613304 569 ntTSL 5 BASIC7.18□□□□□ -1.26
LHX1P48742 MIR6813-201ENST00000621638 56 ntBASIC7.18□□□□□ -1.26
LHX1P48742 AC131009.3-201ENST00000621809 287 ntBASIC7.18□□□□□ -1.26
LHX1P48742 AL035425.4-201ENST00000624509 1063 ntBASIC7.18□□□□□ -1.26
LHX1P48742 TSHZ2-205ENST00000626626 670 ntBASIC7.18□□□□□ -1.26
LHX1P48742 AP005139.1-201ENST00000580702 1647 ntBASIC7.18□□□□□ -1.26
LHX1P48742 PDZD2-202ENST00000438447 11704 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
LHX1P48742 OR8B8-202ENST00000642064 3914 ntAPPRIS P1 BASIC7.18□□□□□ -1.26
LHX1P48742 LINC01505-203ENST00000435485 1686 ntTSL 5 BASIC7.18□□□□□ -1.26
LHX1P48742 AL162456.1-201ENST00000634535 2006 ntBASIC7.18□□□□□ -1.26
LHX1P48742 LARS-212ENST00000510191 3737 ntTSL 2 BASIC7.18□□□□□ -1.26
LHX1P48742 IFNG-AS1-202ENST00000538665 1791 ntTSL 2 BASIC7.18□□□□□ -1.26
LHX1P48742 HERC2-201ENST00000261609 15337 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
LHX1P48742 COLCA1-205ENST00000620864 8098 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
LHX1P48742 MATR3-203ENST00000502499 2664 ntTSL 5 BASIC7.17□□□□□ -1.26
LHX1P48742 ASAH1-267ENST00000637991 2399 ntTSL 5 BASIC7.17□□□□□ -1.26
LHX1P48742 DLC1-215ENST00000520226 3556 ntTSL 2 BASIC7.17□□□□□ -1.26
LHX1P48742 DNM1L-203ENST00000381000 4397 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
LHX1P48742 ZNF711-202ENST00000360700 4844 ntAPPRIS ALT2 TSL 1 (best) BASIC7.17□□□□□ -1.26
LHX1P48742 TMEM72-AS1-201ENST00000450287 3300 ntTSL 2 BASIC7.17□□□□□ -1.26
LHX1P48742 OR2T2-203ENST00000642130 3331 ntAPPRIS P1 BASIC7.17□□□□□ -1.26
LHX1P48742 AC096992.2-201ENST00000609553 1684 ntBASIC7.17□□□□□ -1.26
LHX1P48742 LRRC31-202ENST00000316428 2520 ntAPPRIS P3 TSL 1 (best) BASIC7.17□□□□□ -1.26
LHX1P48742 AP002364.1-201ENST00000623330 3386 ntBASIC7.17□□□□□ -1.26
LHX1P48742 PLAC1-201ENST00000359237 1131 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
LHX1P48742 RNA5SP308-201ENST00000362532 115 ntBASIC7.17□□□□□ -1.26
LHX1P48742 CEACAM1-208ENST00000403461 1263 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
LHX1P48742 BRD8-204ENST00000411594 2967 ntTSL 5 BASIC7.17□□□□□ -1.26
LHX1P48742 AL138828.1-204ENST00000413745 898 ntTSL 5 BASIC7.17□□□□□ -1.26
LHX1P48742 Z82198.3-201ENST00000421145 199 ntBASIC7.17□□□□□ -1.26
LHX1P48742 AL358394.1-201ENST00000422807 535 ntTSL 2 BASIC7.17□□□□□ -1.26
LHX1P48742 LINC00434-201ENST00000423739 419 ntTSL 3 BASIC7.17□□□□□ -1.26
LHX1P48742 LINC01728-201ENST00000428529 524 ntTSL 2 BASIC7.17□□□□□ -1.26
LHX1P48742 AC114812.2-201ENST00000439336 663 ntTSL 2 BASIC7.17□□□□□ -1.26
LHX1P48742 AC084024.1-201ENST00000476186 621 ntTSL 5 BASIC7.17□□□□□ -1.26
LHX1P48742 TPPP2-208ENST00000530140 703 ntAPPRIS P1 TSL 2 BASIC7.17□□□□□ -1.26
LHX1P48742 AC025419.1-204ENST00000539653 745 ntTSL 3 BASIC7.17□□□□□ -1.26
LHX1P48742 LINC02392-202ENST00000549313 574 ntTSL 4 BASIC7.17□□□□□ -1.26
LHX1P48742 AC020891.2-201ENST00000559672 776 ntTSL 2 BASIC7.17□□□□□ -1.26
LHX1P48742 CNEP1R1-204ENST00000562576 656 ntTSL 5 BASIC7.17□□□□□ -1.26
LHX1P48742 AC026462.3-201ENST00000565153 557 ntTSL 2 BASIC7.17□□□□□ -1.26
LHX1P48742 AL390718.1-201ENST00000566904 506 ntTSL 3 BASIC7.17□□□□□ -1.26
LHX1P48742 NUDT7-206ENST00000568787 678 ntTSL 2 BASIC7.17□□□□□ -1.26
LHX1P48742 AC087392.1-201ENST00000576252 820 ntTSL 2 BASIC7.17□□□□□ -1.26
LHX1P48742 PPIAP14-201ENST00000577627 496 ntBASIC7.17□□□□□ -1.26
LHX1P48742 Z98949.1-213ENST00000608921 856 ntTSL 5 BASIC7.17□□□□□ -1.26
LHX1P48742 MALAT1-209ENST00000616691 587 ntTSL 2 BASIC7.17□□□□□ -1.26
LHX1P48742 Metazoa_SRP.129-201ENST00000619776 251 ntBASIC7.17□□□□□ -1.26
LHX1P48742 Metazoa_SRP.106-201ENST00000622471 296 ntBASIC7.17□□□□□ -1.26
LHX1P48742 MIR6503-201ENST00000622884 86 ntBASIC7.17□□□□□ -1.26
LHX1P48742 OR51B2-201ENST00000624187 939 ntAPPRIS P1 BASIC7.17□□□□□ -1.26
LHX1P48742 AC022021.1-201ENST00000634334 843 ntTSL 5 BASIC7.17□□□□□ -1.26
LHX1P48742 LINC01108-202ENST00000635227 776 ntTSL 3 BASIC7.17□□□□□ -1.26
LHX1P48742 AC011346.1-204ENST00000638089 1210 ntAPPRIS P5 TSL 3 BASIC7.17□□□□□ -1.26
LHX1P48742 MDM4-204ENST00000367183 9098 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
LHX1P48742 AC019270.1-201ENST00000523495 3488 ntTSL 5 BASIC7.17□□□□□ -1.26
LHX1P48742 LINC01579-207ENST00000557481 3480 ntTSL 5 BASIC7.17□□□□□ -1.26
LHX1P48742 SLC14A1-201ENST00000321925 3971 ntAPPRIS P3 TSL 1 (best) BASIC7.17□□□□□ -1.26
LHX1P48742 RPL7L1-201ENST00000304734 3769 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
LHX1P48742 RBPJP6-201ENST00000411556 1431 ntBASIC7.17□□□□□ -1.26
LHX1P48742 NXF2B-204ENST00000618302 2884 ntAPPRIS P1 TSL 2 BASIC7.17□□□□□ -1.26
LHX1P48742 BMX-201ENST00000342014 2499 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
LHX1P48742 NUFIP1-201ENST00000379161 3492 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
LHX1P48742 ZNF718-201ENST00000510175 3495 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
LHX1P48742 RNF14-202ENST00000356143 3999 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
LHX1P48742 GDPD4-202ENST00000376217 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC7.17□□□□□ -1.26
LHX1P48742 MYCBP2-212ENST00000612956 1542 ntTSL 5 BASIC7.17□□□□□ -1.26
LHX1P48742 SRBD1-201ENST00000263736 3681 ntAPPRIS P1 TSL 2 BASIC7.16□□□□□ -1.26
LHX1P48742 CDH17-203ENST00000450165 2625 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
LHX1P48742 MFSD8-217ENST00000641178 4374 ntBASIC7.16□□□□□ -1.26
LHX1P48742 DDX47-201ENST00000352940 1698 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
LHX1P48742 ADA2-201ENST00000262607 3925 ntAPPRIS P3 TSL 1 (best) BASIC7.16□□□□□ -1.26
LHX1P48742 HSPD1P4-201ENST00000547203 1702 ntBASIC7.16□□□□□ -1.26
LHX1P48742 RRS1-AS1-201ENST00000499642 4366 ntTSL 2 BASIC7.16□□□□□ -1.26
LHX1P48742 HHLA3-201ENST00000359875 898 ntAPPRIS ALT2 TSL 1 (best) BASIC7.16□□□□□ -1.26
LHX1P48742 PSMD10-204ENST00000361815 768 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
LHX1P48742 RNA5SP140-201ENST00000364524 92 ntBASIC7.16□□□□□ -1.26
LHX1P48742 SNORA7A-201ENST00000384765 139 ntBASIC7.16□□□□□ -1.26
LHX1P48742 AL033519.1-201ENST00000407266 307 ntBASIC7.16□□□□□ -1.26
LHX1P48742 AC118754.1-201ENST00000416958 370 ntTSL 3 BASIC7.16□□□□□ -1.26
LHX1P48742 AC012513.1-201ENST00000417481 784 ntTSL 2 BASIC7.16□□□□□ -1.26
LHX1P48742 RPS7P12-201ENST00000422385 582 ntBASIC7.16□□□□□ -1.26
LHX1P48742 BBIP1-205ENST00000436562 383 ntAPPRIS P1 TSL 3 BASIC7.16□□□□□ -1.26
LHX1P48742 LMCD1-AS1-202ENST00000439407 576 ntTSL 4 BASIC7.16□□□□□ -1.26
LHX1P48742 NPM1P23-201ENST00000440193 849 ntBASIC7.16□□□□□ -1.26
LHX1P48742 AL031681.1-201ENST00000443304 400 ntBASIC7.16□□□□□ -1.26
LHX1P48742 AL122008.4-201ENST00000446433 388 ntTSL 3 BASIC7.16□□□□□ -1.26
LHX1P48742 PHKA2-AS1-202ENST00000452900 656 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
LHX1P48742 SCG5-207ENST00000497208 949 ntTSL 5 BASIC7.16□□□□□ -1.26
LHX1P48742 NACAP5-201ENST00000509863 636 ntBASIC7.16□□□□□ -1.26
LHX1P48742 AC008708.1-201ENST00000517346 474 ntTSL 3 BASIC7.16□□□□□ -1.26
LHX1P48742 AC090527.1-201ENST00000557965 431 ntTSL 3 BASIC7.16□□□□□ -1.26
LHX1P48742 AC022558.1-201ENST00000560450 454 ntTSL 3 BASIC7.16□□□□□ -1.26
LHX1P48742 DSG1-AS1-202ENST00000578477 588 ntTSL 3 BASIC7.16□□□□□ -1.26
LHX1P48742 OR1N2-202ENST00000616791 993 ntAPPRIS P2 BASIC7.16□□□□□ -1.26
LHX1P48742 AC120057.5-201ENST00000623840 154 ntBASIC7.16□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 68 ms