Protein–RNA interactions for Protein: P48431

SOX2, Transcription factor SOX-2, humanhuman

Predictions only

Length 317 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2P48431 RN7SKP254-201ENST00000410685 310 ntBASIC6.12□□□□□ -1.43
SOX2P48431 AL357078.2-201ENST00000416486 427 ntBASIC6.12□□□□□ -1.43
SOX2P48431 LINC01980-202ENST00000425195 491 ntTSL 3 BASIC6.12□□□□□ -1.43
SOX2P48431 AC073900.1-201ENST00000429766 776 ntBASIC6.12□□□□□ -1.43
SOX2P48431 GNA14-AS1-201ENST00000439145 605 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
SOX2P48431 AC108039.2-201ENST00000440214 359 ntBASIC6.12□□□□□ -1.43
SOX2P48431 RPSAP49-201ENST00000445182 886 ntBASIC6.12□□□□□ -1.43
SOX2P48431 KCNQ5-IT1-201ENST00000445310 563 ntTSL 2 BASIC6.12□□□□□ -1.43
SOX2P48431 OR51P1P-201ENST00000447547 942 ntBASIC6.12□□□□□ -1.43
SOX2P48431 AL121970.1-201ENST00000447557 929 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
SOX2P48431 Z99916.1-201ENST00000454253 482 ntTSL 3 BASIC6.12□□□□□ -1.43
SOX2P48431 BZW1P1-201ENST00000454901 1240 ntBASIC6.12□□□□□ -1.43
SOX2P48431 AL592161.1-201ENST00000456389 861 ntTSL 3 BASIC6.12□□□□□ -1.43
SOX2P48431 MTND6P32-201ENST00000457611 483 ntBASIC6.12□□□□□ -1.43
SOX2P48431 AC078883.3-201ENST00000458314 512 ntTSL 2 BASIC6.12□□□□□ -1.43
SOX2P48431 SNORA81.1-201ENST00000458922 177 ntBASIC6.12□□□□□ -1.43
SOX2P48431 RN7SL688P-201ENST00000471754 275 ntBASIC6.12□□□□□ -1.43
SOX2P48431 AC009108.1-201ENST00000473913 796 ntBASIC6.12□□□□□ -1.43
SOX2P48431 RN7SL516P-201ENST00000496127 297 ntBASIC6.12□□□□□ -1.43
SOX2P48431 ARF4-209ENST00000496292 1467 ntTSL 5 BASIC6.12□□□□□ -1.43
SOX2P48431 LNCPRESS2-201ENST00000502518 616 ntTSL 5 BASIC6.12□□□□□ -1.43
SOX2P48431 AC025768.1-201ENST00000510057 267 ntBASIC6.12□□□□□ -1.43
SOX2P48431 DDX4-211ENST00000511853 1984 ntTSL 2 BASIC6.12□□□□□ -1.43
SOX2P48431 RNU6-760P-201ENST00000516078 97 ntBASIC6.12□□□□□ -1.43
SOX2P48431 RN7SKP157-201ENST00000516174 282 ntBASIC6.12□□□□□ -1.43
SOX2P48431 EEF1B2P2-201ENST00000519625 676 ntBASIC6.12□□□□□ -1.43
SOX2P48431 AC021733.1-201ENST00000519786 325 ntTSL 3 BASIC6.12□□□□□ -1.43
SOX2P48431 AC016813.1-201ENST00000521511 735 ntTSL 3 BASIC6.12□□□□□ -1.43
SOX2P48431 AC012613.1-201ENST00000522685 387 ntTSL 2 BASIC6.12□□□□□ -1.43
SOX2P48431 LRP4-AS1-202ENST00000531719 731 ntTSL 4 BASIC6.12□□□□□ -1.43
SOX2P48431 AC022796.1-202ENST00000531882 477 ntTSL 5 BASIC6.12□□□□□ -1.43
SOX2P48431 DLG2-230ENST00000532653 2891 ntAPPRIS ALT2 TSL 1 (best) BASIC6.12□□□□□ -1.43
SOX2P48431 NUP107-211ENST00000539906 3004 ntTSL 2 BASIC6.12□□□□□ -1.43
SOX2P48431 PRR13-203ENST00000546581 810 ntAPPRIS ALT2 TSL 3 BASIC6.12□□□□□ -1.43
SOX2P48431 LINC00640-201ENST00000554409 498 ntTSL 3 BASIC6.12□□□□□ -1.43
SOX2P48431 AC021755.3-201ENST00000560376 864 ntTSL 5 BASIC6.12□□□□□ -1.43
SOX2P48431 AC022613.3-201ENST00000560740 1346 ntBASIC6.12□□□□□ -1.43
SOX2P48431 LINC01616-201ENST00000561816 2280 ntBASIC6.12□□□□□ -1.43
SOX2P48431 AC007938.1-201ENST00000562524 2902 ntBASIC6.12□□□□□ -1.43
SOX2P48431 AC061975.4-201ENST00000578466 776 ntTSL 3 BASIC6.12□□□□□ -1.43
SOX2P48431 LRRC75A-AS1-220ENST00000579473 585 ntTSL 4 BASIC6.12□□□□□ -1.43
SOX2P48431 AC090330.1-201ENST00000588646 764 ntBASIC6.12□□□□□ -1.43
SOX2P48431 AC003002.3-201ENST00000597410 521 ntAPPRIS P1 TSL 3 BASIC6.12□□□□□ -1.43
SOX2P48431 AL136520.1-201ENST00000600311 1322 ntBASIC6.12□□□□□ -1.43
SOX2P48431 AL023806.2-201ENST00000603042 263 ntBASIC6.12□□□□□ -1.43
SOX2P48431 AL109936.2-201ENST00000605350 650 ntBASIC6.12□□□□□ -1.43
SOX2P48431 AC096586.2-201ENST00000610260 441 ntBASIC6.12□□□□□ -1.43
SOX2P48431 LINC01742-201ENST00000616333 628 ntTSL 3 BASIC6.12□□□□□ -1.43
SOX2P48431 AC023510.2-201ENST00000622162 746 ntBASIC6.12□□□□□ -1.43
SOX2P48431 AL353763.1-201ENST00000624467 1628 ntBASIC6.12□□□□□ -1.43
SOX2P48431 AP001002.1-201ENST00000625148 1513 ntBASIC6.12□□□□□ -1.43
SOX2P48431 AL359745.1-201ENST00000626943 760 ntTSL 5 BASIC6.12□□□□□ -1.43
SOX2P48431 DTHD1-206ENST00000639862 3819 ntTSL 5 BASIC6.12□□□□□ -1.43
SOX2P48431 AC119674.1-209ENST00000642031 997 ntBASIC6.12□□□□□ -1.43
SOX2P48431 AC093010.2-202ENST00000493033 3023 ntTSL 2 BASIC6.12□□□□□ -1.43
SOX2P48431 DAZ1-201ENST00000382510 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC6.11□□□□□ -1.43
SOX2P48431 AC010328.1-201ENST00000596769 4060 ntTSL 2 BASIC6.11□□□□□ -1.43
SOX2P48431 MEPE-203ENST00000424957 2022 ntAPPRIS P3 TSL 2 BASIC6.11□□□□□ -1.43
SOX2P48431 EIF5AL1-201ENST00000520547 3840 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
SOX2P48431 RTN4-205ENST00000394609 1898 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
SOX2P48431 CHCHD7-203ENST00000396723 1550 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
SOX2P48431 OXCT1-206ENST00000512084 1593 ntTSL 2 BASIC6.11□□□□□ -1.43
SOX2P48431 CASP10-203ENST00000313728 1521 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
SOX2P48431 OR7G2-202ENST00000641081 3015 ntAPPRIS ALT2 BASIC6.11□□□□□ -1.43
SOX2P48431 TMC7-202ENST00000421369 4499 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
SOX2P48431 TMEM161B-210ENST00000511218 1351 ntTSL 2 BASIC6.11□□□□□ -1.43
SOX2P48431 NME5-201ENST00000265191 1198 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
SOX2P48431 RPS3A-201ENST00000274065 934 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
SOX2P48431 PRAC1-201ENST00000290294 386 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
SOX2P48431 PTTG1-201ENST00000352433 753 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
SOX2P48431 ALDH1A1-202ENST00000376939 822 ntTSL 5 BASIC6.11□□□□□ -1.43
SOX2P48431 IGLV5-52-201ENST00000390289 379 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
SOX2P48431 MIR541-201ENST00000401360 84 ntBASIC6.11□□□□□ -1.43
SOX2P48431 AHSA2-203ENST00000410073 479 ntTSL 5 BASIC6.11□□□□□ -1.43
SOX2P48431 RN7SKP271-201ENST00000410528 320 ntBASIC6.11□□□□□ -1.43
SOX2P48431 AF274855.1-201ENST00000411474 850 ntTSL 3 BASIC6.11□□□□□ -1.43
SOX2P48431 VNN3-205ENST00000417437 1117 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
SOX2P48431 AL354692.1-201ENST00000423044 315 ntBASIC6.11□□□□□ -1.43
SOX2P48431 AC006333.1-204ENST00000429396 648 ntTSL 3 BASIC6.11□□□□□ -1.43
SOX2P48431 AC000362.1-201ENST00000433725 425 ntBASIC6.11□□□□□ -1.43
SOX2P48431 IGKV6D-21-201ENST00000436451 409 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
SOX2P48431 NQO1-204ENST00000439109 924 ntTSL 2 BASIC6.11□□□□□ -1.43
SOX2P48431 AC106869.1-202ENST00000441997 604 ntTSL 4 BASIC6.11□□□□□ -1.43
SOX2P48431 AL033379.1-201ENST00000442184 481 ntTSL 3 BASIC6.11□□□□□ -1.43
SOX2P48431 HBG2-204ENST00000444587 307 ntTSL 2 BASIC6.11□□□□□ -1.43
SOX2P48431 AC000124.1-201ENST00000448311 957 ntTSL 2 BASIC6.11□□□□□ -1.43
SOX2P48431 AC093799.1-201ENST00000452411 499 ntBASIC6.11□□□□□ -1.43
SOX2P48431 OR52Y1P-201ENST00000452418 828 ntBASIC6.11□□□□□ -1.43
SOX2P48431 AC009411.2-201ENST00000458359 539 ntTSL 4 BASIC6.11□□□□□ -1.43
SOX2P48431 FAM74A1-201ENST00000465257 623 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
SOX2P48431 AC018635.1-201ENST00000468292 1030 ntBASIC6.11□□□□□ -1.43
SOX2P48431 RPL34P29-201ENST00000491411 325 ntBASIC6.11□□□□□ -1.43
SOX2P48431 AC069439.2-201ENST00000496403 789 ntTSL 2 BASIC6.11□□□□□ -1.43
SOX2P48431 LINC00632-202ENST00000498732 746 ntTSL 3 BASIC6.11□□□□□ -1.43
SOX2P48431 AC117473.1-201ENST00000508616 392 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
SOX2P48431 AC027309.1-201ENST00000519976 528 ntTSL 4 BASIC6.11□□□□□ -1.43
SOX2P48431 AC134349.2-201ENST00000535136 910 ntBASIC6.11□□□□□ -1.43
SOX2P48431 AC006206.2-201ENST00000537192 992 ntTSL 4 BASIC6.11□□□□□ -1.43
SOX2P48431 AC087257.2-201ENST00000538759 928 ntBASIC6.11□□□□□ -1.43
SOX2P48431 AC068631.3-201ENST00000538831 225 ntBASIC6.11□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 80.6 ms