Protein–RNA interactions for Protein: Q8NDX5

PHC3, Polyhomeotic-like protein 3, humanhuman

Predictions only

Length 983 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHC3Q8NDX5 AC044839.1-209ENST00000529769 878 ntTSL 5 BASIC7.73□□□□□ -1.17
PHC3Q8NDX5 AL590560.1-203ENST00000544342 408 ntAPPRIS ALT2 TSL 2 BASIC7.73□□□□□ -1.17
PHC3Q8NDX5 AC016152.1-201ENST00000548344 521 ntTSL 3 BASIC7.73□□□□□ -1.17
PHC3Q8NDX5 SNHG14-217ENST00000552781 552 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
PHC3Q8NDX5 AC090607.1-201ENST00000560057 449 ntTSL 3 BASIC7.73□□□□□ -1.17
PHC3Q8NDX5 CYB5B-205ENST00000561792 823 ntTSL 5 BASIC7.73□□□□□ -1.17
PHC3Q8NDX5 AC099508.2-201ENST00000563098 510 ntTSL 3 BASIC7.73□□□□□ -1.17
PHC3Q8NDX5 AC109446.2-201ENST00000567872 497 ntBASIC7.73□□□□□ -1.17
PHC3Q8NDX5 TUBAP4-201ENST00000569261 416 ntBASIC7.73□□□□□ -1.17
PHC3Q8NDX5 AC137056.1-202ENST00000575772 753 ntTSL 2 BASIC7.73□□□□□ -1.17
PHC3Q8NDX5 AC093484.4-201ENST00000583934 461 ntTSL 5 BASIC7.73□□□□□ -1.17
PHC3Q8NDX5 RN7SL664P-201ENST00000584239 305 ntBASIC7.73□□□□□ -1.17
PHC3Q8NDX5 PRELID3BP3-201ENST00000584963 545 ntBASIC7.73□□□□□ -1.17
PHC3Q8NDX5 AC061975.8-201ENST00000587058 721 ntBASIC7.73□□□□□ -1.17
PHC3Q8NDX5 RPL27-205ENST00000589037 585 ntAPPRIS P1 TSL 3 BASIC7.73□□□□□ -1.17
PHC3Q8NDX5 AC073137.1-201ENST00000605636 634 ntBASIC7.73□□□□□ -1.17
PHC3Q8NDX5 AC243772.3-202ENST00000609662 1148 ntBASIC7.73□□□□□ -1.17
PHC3Q8NDX5 Metazoa_SRP.124-201ENST00000610352 345 ntBASIC7.73□□□□□ -1.17
PHC3Q8NDX5 MIR6762-201ENST00000613340 86 ntBASIC7.73□□□□□ -1.17
PHC3Q8NDX5 AC011939.3-201ENST00000613686 466 ntBASIC7.73□□□□□ -1.17
PHC3Q8NDX5 MALAT1-208ENST00000616527 572 ntTSL 3 BASIC7.73□□□□□ -1.17
PHC3Q8NDX5 CSTL1-205ENST00000619238 477 ntTSL 5 BASIC7.73□□□□□ -1.17
PHC3Q8NDX5 AC087072.2-201ENST00000621060 682 ntBASIC7.73□□□□□ -1.17
PHC3Q8NDX5 AL353608.4-201ENST00000624487 1188 ntBASIC7.73□□□□□ -1.17
PHC3Q8NDX5 OR4X2-201ENST00000624868 1025 ntAPPRIS P1 BASIC7.73□□□□□ -1.17
PHC3Q8NDX5 AP000851.2-201ENST00000629499 721 ntTSL 3 BASIC7.73□□□□□ -1.17
PHC3Q8NDX5 LINC02034-201ENST00000635368 760 ntTSL 5 BASIC7.73□□□□□ -1.17
PHC3Q8NDX5 AC025287.4-201ENST00000640173 1240 ntAPPRIS P1 TSL 5 BASIC7.73□□□□□ -1.17
PHC3Q8NDX5 AC241585.4-201ENST00000640951 686 ntBASIC7.73□□□□□ -1.17
PHC3Q8NDX5 OR2M2-202ENST00000641211 1229 ntAPPRIS P1 BASIC7.73□□□□□ -1.17
PHC3Q8NDX5 MAPK10-365ENST00000641902 3825 ntBASIC7.73□□□□□ -1.17
PHC3Q8NDX5 AC087885.1-201ENST00000641910 848 ntBASIC7.73□□□□□ -1.17
PHC3Q8NDX5 AC005614.1-201ENST00000598952 3653 ntBASIC7.73□□□□□ -1.17
PHC3Q8NDX5 TRIM2-201ENST00000338700 6735 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
PHC3Q8NDX5 MSANTD3-206ENST00000613183 1755 ntAPPRIS P1 TSL 2 BASIC7.73□□□□□ -1.17
PHC3Q8NDX5 ZNF502-201ENST00000296091 3270 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
PHC3Q8NDX5 DCLRE1C-206ENST00000378254 2485 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
PHC3Q8NDX5 POPDC3-201ENST00000254765 1345 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
PHC3Q8NDX5 CYFIP2-201ENST00000435847 3673 ntTSL 2 BASIC7.73□□□□□ -1.17
PHC3Q8NDX5 BABAM2-201ENST00000342045 1681 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
PHC3Q8NDX5 COPS4-209ENST00000511653 1695 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
PHC3Q8NDX5 PDE4B-206ENST00000423207 4546 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
PHC3Q8NDX5 MS4A2-204ENST00000617306 3512 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
PHC3Q8NDX5 GLRA3-201ENST00000274093 8770 ntAPPRIS P3 TSL 1 (best) BASIC7.73□□□□□ -1.17
PHC3Q8NDX5 SLC17A3-203ENST00000361703 1543 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
PHC3Q8NDX5 PLEKHA1-204ENST00000392799 3221 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
PHC3Q8NDX5 SH3D19-203ENST00000409598 5284 ntAPPRIS ALT1 TSL 1 (best) BASIC7.72□□□□□ -1.17
PHC3Q8NDX5 TSC1-201ENST00000298552 8604 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
PHC3Q8NDX5 LINC01095-202ENST00000507726 1715 ntTSL 2 BASIC7.72□□□□□ -1.17
PHC3Q8NDX5 ANK2-215ENST00000509550 3638 ntTSL 2 BASIC7.72□□□□□ -1.17
PHC3Q8NDX5 UTY-216ENST00000624098 3636 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
PHC3Q8NDX5 FLRT3-201ENST00000341420 3971 ntAPPRIS P1 TSL 2 BASIC7.72□□□□□ -1.17
PHC3Q8NDX5 CFAP65-201ENST00000295729 2259 ntAPPRIS ALT2 TSL 1 (best) BASIC7.72□□□□□ -1.17
PHC3Q8NDX5 FGF13-201ENST00000305414 1939 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
PHC3Q8NDX5 ZNF611-202ENST00000453741 4380 ntTSL 4 BASIC7.72□□□□□ -1.17
PHC3Q8NDX5 SRPX2-201ENST00000373004 6679 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
PHC3Q8NDX5 GALK2-201ENST00000327171 5299 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
PHC3Q8NDX5 LINC01602-201ENST00000522992 2109 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
PHC3Q8NDX5 ZNF625-ZNF20-201ENST00000430024 2651 ntAPPRIS P5 TSL 5 BASIC7.72□□□□□ -1.17
PHC3Q8NDX5 PLPPR1-202ENST00000395056 2318 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
PHC3Q8NDX5 BDNF-AS-201ENST00000499008 2324 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
PHC3Q8NDX5 ZNF211-202ENST00000254182 1959 ntTSL 2 BASIC7.72□□□□□ -1.17
PHC3Q8NDX5 AL157831.2-201ENST00000564681 3095 ntBASIC7.72□□□□□ -1.17
PHC3Q8NDX5 LINC00208-201ENST00000304233 2150 ntTSL 2 BASIC7.72□□□□□ -1.17
PHC3Q8NDX5 IFNA7-201ENST00000239347 737 ntAPPRIS P1 BASIC7.72□□□□□ -1.17
PHC3Q8NDX5 C2orf80-201ENST00000341287 1238 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
PHC3Q8NDX5 PTTG1-201ENST00000352433 753 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
PHC3Q8NDX5 OR5H2-201ENST00000355273 945 ntBASIC7.72□□□□□ -1.17
PHC3Q8NDX5 OR5H2-202ENST00000356526 930 ntAPPRIS P1 BASIC7.72□□□□□ -1.17
PHC3Q8NDX5 ZNF66-202ENST00000360204 1120 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
PHC3Q8NDX5 RNA5SP463-201ENST00000363030 120 ntBASIC7.72□□□□□ -1.17
PHC3Q8NDX5 Y_RNA.169-201ENST00000363745 96 ntBASIC7.72□□□□□ -1.17
PHC3Q8NDX5 BEND6-201ENST00000370745 579 ntTSL 5 BASIC7.72□□□□□ -1.17
PHC3Q8NDX5 CST13P-201ENST00000376992 428 ntBASIC7.72□□□□□ -1.17
PHC3Q8NDX5 SNORD65-201ENST00000391079 73 ntBASIC7.72□□□□□ -1.17
PHC3Q8NDX5 NCALD-203ENST00000395923 3808 ntAPPRIS P1 TSL 5 BASIC7.72□□□□□ -1.17
PHC3Q8NDX5 VDAC1P8-201ENST00000406025 853 ntBASIC7.72□□□□□ -1.17
PHC3Q8NDX5 AL008626.1-201ENST00000412357 775 ntTSL 2 BASIC7.72□□□□□ -1.17
PHC3Q8NDX5 Z68694.1-201ENST00000413929 841 ntBASIC7.72□□□□□ -1.17
PHC3Q8NDX5 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC7.72□□□□□ -1.17
PHC3Q8NDX5 USP9YP21-201ENST00000420603 432 ntBASIC7.72□□□□□ -1.17
PHC3Q8NDX5 BRWD1-AS1-201ENST00000423274 691 ntTSL 4 BASIC7.72□□□□□ -1.17
PHC3Q8NDX5 GH2-202ENST00000423893 819 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
PHC3Q8NDX5 AKR1D1-203ENST00000432161 1236 ntTSL 2 BASIC7.72□□□□□ -1.17
PHC3Q8NDX5 AC084290.1-201ENST00000434995 374 ntBASIC7.72□□□□□ -1.17
PHC3Q8NDX5 AL591438.2-201ENST00000452635 691 ntBASIC7.72□□□□□ -1.17
PHC3Q8NDX5 GH2-204ENST00000456543 794 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
PHC3Q8NDX5 AC080129.1-201ENST00000457815 406 ntTSL 3 BASIC7.72□□□□□ -1.17
PHC3Q8NDX5 RPL6P9-201ENST00000466502 859 ntBASIC7.72□□□□□ -1.17
PHC3Q8NDX5 AC117392.1-201ENST00000487061 596 ntBASIC7.72□□□□□ -1.17
PHC3Q8NDX5 FAM177A1P1-201ENST00000503598 473 ntBASIC7.72□□□□□ -1.17
PHC3Q8NDX5 AC093801.1-201ENST00000504017 307 ntTSL 2 BASIC7.72□□□□□ -1.17
PHC3Q8NDX5 AC026414.1-201ENST00000504046 698 ntBASIC7.72□□□□□ -1.17
PHC3Q8NDX5 AC105345.2-201ENST00000515186 664 ntTSL 3 BASIC7.72□□□□□ -1.17
PHC3Q8NDX5 AP000426.1-201ENST00000518749 361 ntTSL 3 BASIC7.72□□□□□ -1.17
PHC3Q8NDX5 LINC01609-201ENST00000519506 424 ntTSL 3 BASIC7.72□□□□□ -1.17
PHC3Q8NDX5 AC090568.2-203ENST00000521433 579 ntTSL 4 BASIC7.72□□□□□ -1.17
PHC3Q8NDX5 AC087894.2-201ENST00000541797 462 ntTSL 4 BASIC7.72□□□□□ -1.17
PHC3Q8NDX5 CCDC32-203ENST00000558113 576 ntTSL 3 BASIC7.72□□□□□ -1.17
PHC3Q8NDX5 CCDC32-210ENST00000559911 677 ntTSL 5 BASIC7.72□□□□□ -1.17
Retrieved 100 of 98,524 protein–RNA pairs in 114.6 ms